iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005465

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

GL348714

Gene Name

ARALYDRAFT_893150

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_200224.1	scaffold_200224.1	scaffold_200224.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.90e-08	33.6	317	358

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+ ++d+  ++ lpCgH+fh  C+ kw       + +++CPlC+
   Q: 317  CCICLSAYEDEteLRELPCGHHFHCGCVDKW------LYINATCPLCK 358
           ********66644888***************......**********7 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MSTETTTEAT PLILTDGGGG GRSVRRQGLR EAARLLRHAS SGRMMMREPS MLVREAAAEQ 60
LEERQSDWAY SKPVVVLDFV WNLAFVAVAT AVLVLSSDEN PNMPLRVWVI GYGLQCMMHM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTTTGAAGA GAGAGAGAAA ATGTCAACAG AGACGACGAC GGAAGCAACG CCTTTGATTT 60
TAACCGACGG CGGAGGAGGA GGGAGATCGG TGAGGAGACA AGGGTTAAGA GAAGCGGCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_893150

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006799	Arabidopsis thaliana	94.75	8.00e-164	568.00
IUUC-Ang-009565	Aspergillus niger	36.70	3.00e-10	58.90
IUUC-Bdi-014788	Brachypodium distachyon	60.34	8.00e-109	386.00
IUUC-Bol-015464	Brassica oleracea	75.46	2.00e-151	527.00
IUUC-Bra-017274	Brassica rapa	75.46	2.00e-151	527.00
IUUC-Hvu-047150	Hordeum vulgare	63.03	4.00e-108	383.00
IUUC-Lpe-051532	Leersia perrieri	62.03	2.00e-99	355.00
IUUC-Mac-064494	Musa acuminata	65.22	3.00e-109	387.00
IUUC-Oba-075346	Oryza barthii	59.94	2.00e-105	374.00
IUUC-Ogl-077385	Oryza glaberrima	59.94	2.00e-105	374.00
IUUC-Ogu-078850	Oryza glumaepatula	59.94	2.00e-105	374.00
IUUC-Oin-079121	Oryza indica	63.16	4.00e-93	333.00
IUUC-Olo-080611	Oryza longistaminata	60.92	4.00e-81	296.00
IUUC-Ome-081898	Oryza meridionalis	60.23	4.00e-97	347.00
IUUC-Oni-082330	Oryza nivara	59.94	2.00e-105	374.00
IUUC-Opu-083495	Oryza punctata	61.32	1.00e-98	352.00
IUUC-Oru-084814	Oryza rufipogon	59.94	2.00e-105	374.00
IUUC-Osa-085284	Oryza sativa	59.94	2.00e-105	374.00
IUUC-Ppe-102030	Prunus persica	68.07	3.00e-115	407.00
IUUC-Pgr-103548	Puccinia graminis	42.59	6.00e-08	50.80
IUUC-Smo-109047	Selaginella moellendorffii	57.98	4.00e-98	350.00
IUUC-Sbi-114146	Sorghum bicolor	63.72	8.00e-106	375.00
IUUC-Tca-121775	Theobroma cacao	72.33	3.00e-118	417.00
IUUC-Tae-124948	Triticum aestivum	62.54	8.00e-113	399.00
IUUC-Tur-126321	Triticum urartu	62.28	1.00e-110	392.00
IUUC-Vda-129814	Verticillium dahliae	52.94	1.00e-10	61.20
IUUC-Vvi-130970	Vitis vinifera	67.28	1.00e-109	389.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence