iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121776

Ensembl Protein ID

EOY07967

UniProt Accession

A0A061ETH5; A0A061ETH5_THECC

Genbank Protein ID

EOY07967.1; EOY07968.1

Protein Name

PGPD14 isoform 1

Genbank Nucleotide ID

CM001883; CM001883

Gene Name

TCM_022296

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_022296	EOY07967	EOY07967
TCM_022296	EOY07969	EOY07969

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.40e-07	30.5	161	203

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf....kdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           Ca+C+e +    kd   vlpCgH++h++C++++     +s  + +CP+C
   Q: 161  CAVCFEFLfdttKD-ITVLPCGHTIHLECVKQM-----ESHFRYSCPVC 203
           ******99555444.668***********9888.....5777889**** PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MESSFEPKMS NSSSIMENGY GEFGCSHYRR RCKIRAPCCD EIFDCRHCHN ESKNSIEVNP 60
LDRHEVPRHD IKRVICSLCD REQDVQQHCI YCGVCMGNYF CSKCNFFDDD VSKNQYHCDE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTAAGTGCA ATAATTGGGT CGGCCGGCAA AAACGCTGGC GTGTCGCCTG GTAATAGGGA 60
AGTTAGGGAT GGGAGGTTGG TTATTATGGA TTAAAAAGAA AATCTAAAGC AGGGGTCAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR004039--Rubredoxin-type_fold
IPR027370--Znf-RING_LisH
IPR008913--Znf_CHY
IPR017921--Znf_CTCHY
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51266--ZF_CHY
PS51270--ZF_CTCHY
PS50089--ZF_RING_2

Pfam

PF05495--zf-CHY
PF13445--zf-RING_UBOX

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Mtr-058584	Medicago truncatula	77.78	6.00e-126	442.00
IUUC-Olo-080982	Oryza longistaminata	70.91	8.00e-96	342.00
IUUC-Pop-099491	Populus trichocarpa	79.34	4.00e-132	462.00
IUUC-Ppe-101606	Prunus persica	80.14	7.00e-139	485.00
IUUC-Smo-108873	Selaginella moellendorffii	68.95	1.00e-105	375.00
IUUC-Stu-111990	Solanum tuberosum	73.36	9.00e-130	455.00
IUUC-Ttr-128736	Tursiops truncatus	43.85	8.00e-25	106.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence