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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Spo-108256
UUCD1 version UUC-ScP-00076
Ensembl Protein ID SPCC1672.07.1:pep
UniProt Accession O14053; UTP21_SCHPO
Genbank Protein ID CAA20445.1
Protein Name U3 small nucleolar RNA-associated protein 21 homolog
Genbank Nucleotide ID CU329672
Gene Name SPCC1672.07
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
SPCC1672.07 SPCC1672.07.1 SPCC1672.07.1:pep
Annotation
mRNA Expression
GEO
Protein-protein Interaction
iRefIndexHINTMentha
Protein Expression/Proteomics
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.10e-16 58.5 570 608
UBD/Beta-Prp 2.70e-55 185.7 446 612
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH+++ t+++f ++ + lv++s Dgti+ WDl tg+l+ 
   Q: 570  GHSNRLTSFDFsDTgRWLVTASLDGTIRTWDLPTGHLID 608
           8**********744799******************9875 PP
   

   UBD/Beta-Prp
   S: 96   svlslsfspsgdklvsGshdrtirvwdletgqclee..tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvys 185
           sv+s+ +s  g++ ++Gs+  ++ v+++++g + ++    s   + v+ v ++  +++lv++slD+++++Wd + g+l++ l     +s+++
   Q: 446  SVRSVCVSCCGNFGLIGSSKGVVDVYNMQSGIKRKSfgQSSLSGKPVTAVMLDNVNRILVTASLDGILKFWDFNKGNLIDSLD--VGSSITH 535
           577777777778999****************999988755555667************************************5..69***** PP
   S: 186  lsfdsngkelvsgsldgt.vklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlql 262
            ++++++ +lv++++d   ++++d+qt ++vr+l gh++  +s +fs+ + +lv++s Dg+ir Wdl +g l+ +++ 
   Q: 536  AIYQHSS-DLVAVACDDFgIRIVDVQTRKIVRELWGHSNRLTSFDFSDTGRWLVTASLDGTIRTWDLPTGHLIDSIST 612
           *****76.77777776644***************************************************99988776 PP
   
Organism Schizosaccharomyces pombe
Functional Description
(View)

Functional Description


     Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
 Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
Protein Sequence
(Fasta)
MPFAEKKRRT YENAVKPLRK SRIYAPFRSI GHVSNAVPFD IEARGTHFLV TTSVGNTFQT 60
YDCEKLNLLF VGKQLDKEIT CLKSFKDFML VAAGSKIFAY KRGKIIWDID VEQEHGTVTH 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Spo-108256|E3,WD_repeat;UBD,Beta-Prp|Schizosaccharomyces pombe
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CTGCTTTTTG CAAGTTACAG GACAAGAGCC ATCCTTTGCC ATTTTACGTG CTATTTGTGT 60
TCTTTCCTGT GATAAAATGC CATTTGCAGA GAAGAAACGG AGGACTTATG AAAATGCGGT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Spo-108256|E3,WD_repeat;UBD,Beta-Prp|Schizosaccharomyces pombe
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0687--Ribonucleoprotein
KW-0690--Ribosome biogenesis
KW-0853--WD repeat
Interpro

IPR007319--SSU_processome_Utp21
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF04192--Utp21
PF00400--WD40
SMART

SM00320--WD40
Gene Ontology

GO:0032153--C:cell division site
GO:0005829--C:cytosol
GO:0072686--C:mitotic spindle
GO:0044732--C:mitotic spindle pole body
GO:0005634--C:nucleus
GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0006364--P:rRNA processing
KEGG spo:SPCC1672.07
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-001096 Aegilops tauschii 36.18 4.00e-155 540.00
IUUC-Aml-002289 Ailuropoda melanoleuca 37.40 8.00e-152 529.00
IUUC-Atr-002859 Amborella trichopoda 34.90 2.00e-120 424.00
IUUC-Apl-003505 Anas platyrhynchos 35.93 3.00e-140 490.00
IUUC-Aca-004339 Anolis carolinensis 35.39 5.00e-148 516.00
IUUC-Aly-005913 Arabidopsis lyrata 35.81 4.00e-148 516.00
IUUC-Ath-006767 Arabidopsis thaliana 36.40 3.00e-151 526.00
IUUC-Ago-007763 Ashbya gossypii 39.64 0.00e+00 632.00
IUUC-Acl-008275 Aspergillus clavatus 38.07 2.00e-128 451.00
IUUC-Afl-008457 Aspergillus flavus 40.00 1.00e-137 481.00
IUUC-Afu-008914 Aspergillus fumigatus 34.29 1.00e-125 442.00
IUUC-Ani-009225 Aspergillus nidulans 36.83 3.00e-145 507.00
IUUC-Aor-010046 Aspergillus oryzae 36.13 3.00e-167 580.00
IUUC-Ate-010337 Aspergillus terreus 35.91 2.00e-160 558.00
IUUC-Ame-010963 Astyanax mexicanus 34.78 3.00e-134 470.00
IUUC-Bgr-011973 Blumeria graminis 36.80 8.00e-171 592.00
IUUC-Bta-012462 Bos taurus 37.65 1.00e-149 521.00
IUUC-Bci-013940 Botrytis cinerea 36.65 2.00e-177 614.00
IUUC-Bdi-014725 Brachypodium distachyon 36.35 2.00e-153 534.00
IUUC-Bol-016534 Brassica oleracea 36.08 6.00e-150 522.00
IUUC-Bra-016781 Brassica rapa 34.72 2.00e-146 511.00
IUUC-Cel-018581 Caenorhabditis elegans 27.77 3.00e-86 311.00
IUUC-Cja-019675 Callithrix jacchus 36.98 7.00e-161 559.00
IUUC-Cfa-020118 Canis familiaris 37.19 5.00e-149 519.00
IUUC-Cpo-021798 Cavia porcellus 37.05 6.00e-151 526.00
IUUC-Cre-022566 Chlamydomonas reinhardtii 29.60 4.00e-29 120.00
IUUC-Csa-023547 Chlorocebus sabaeus 37.30 8.00e-148 515.00
IUUC-Cho-024518 Choloepus hoffmanni 34.49 2.00e-72 265.00
IUUC-Cin-025339 Ciona intestinalis 34.16 3.00e-142 497.00
IUUC-Cgl-026476 Colletotrichum gloeosporioides 36.83 2.00e-167 581.00
IUUC-Cne-026859 Cryptococcus neoformans 39.82 5.00e-172 596.00
IUUC-Cme-027173 Cyanidioschyzon merolae 27.37 8.00e-72 263.00
IUUC-Dre-027733 Danio rerio 33.64 9.00e-129 452.00
IUUC-Dno-029439 Dasypus novemcinctus 36.87 2.00e-148 517.00
IUUC-Dor-030329 Dipodomys ordii 38.74 1.00e-74 272.00
IUUC-Dse-031511 Dothistroma septosporum 34.68 1.00e-138 485.00
IUUC-Dme-031694 Drosophila melanogaster 32.26 5.00e-122 430.00
IUUC-Ete-032930 Echinops telfairi 34.96 9.00e-125 439.00
IUUC-Eca-033302 Equus caballus 37.56 4.00e-152 530.00
IUUC-Eeu-034516 Erinaceus europaeus 36.89 5.00e-154 536.00
IUUC-Fca-036064 Felis catus 37.44 2.00e-151 527.00
IUUC-Fal-037024 Ficedula albicollis 36.22 3.00e-148 517.00
IUUC-Fox-037787 Fusarium oxysporum 35.56 1.00e-152 531.00
IUUC-Fso-038378 Fusarium solani 35.67 4.00e-151 526.00
IUUC-Gmo-039637 Gadus morhua 36.28 3.00e-83 300.00
IUUC-Ggr-040108 Gaeumannomyces graminis 34.42 2.00e-157 547.00
IUUC-Gga-040982 Gallus gallus 36.30 1.00e-160 558.00
IUUC-Gac-041565 Gasterosteus aculeatus 36.76 1.00e-137 482.00
IUUC-Gma-043414 Glycine max 35.67 2.00e-148 517.00
IUUC-Ggo-045463 Gorilla gorilla 37.13 4.00e-151 526.00
IUUC-Hsa-045675 Homo sapiens 36.87 2.00e-151 527.00
IUUC-Hvu-047352 Hordeum vulgare 35.33 1.00e-136 478.00
IUUC-Itr-048088 Ictidomys tridecemlineatus 37.09 1.00e-159 555.00
IUUC-Kpa-049164 Komagataella pastoris 39.17 4.00e-169 586.00
IUUC-Lch-050476 Latimeria chalumnae 34.15 4.00e-150 523.00
IUUC-Lpe-051556 Leersia perrieri 31.10 6.00e-114 402.00
IUUC-Loc-052820 Lepisosteus oculatus 34.29 5.00e-141 493.00
IUUC-Lma-052961 Leptosphaeria maculans 35.24 8.00e-149 519.00
IUUC-Laf-054006 Loxodonta africana 36.51 8.00e-141 492.00
IUUC-Mcc-055037 Macaca mulatta 36.93 1.00e-151 528.00
IUUC-Mor-057280 Magnaporthe oryzae 35.38 5.00e-163 566.00
IUUC-Mpo-057408 Magnaporthe poae 34.42 2.00e-150 524.00
IUUC-Mtr-058473 Medicago truncatula 35.92 2.00e-154 538.00
IUUC-Mla-058892 Melampsora laricipopulina 34.32 1.00e-125 442.00
IUUC-Mga-059598 Meleagris gallopavo 32.53 2.00e-121 428.00
IUUC-Mvi-060334 Microbotryum violaceum 38.10 7.00e-139 486.00
IUUC-Mmr-061239 Microcebus murinus 36.69 4.00e-147 513.00
IUUC-Mdo-062471 Monodelphis domestica 36.91 2.00e-145 507.00
IUUC-Mmu-063872 Mus musculus 37.21 9.00e-155 538.00
IUUC-Mac-064631 Musa acuminata 35.00 2.00e-129 454.00
IUUC-Mpu-066039 Mustela putorius furo 37.05 5.00e-161 559.00
IUUC-Mlu-067485 Myotis lucifugus 37.77 1.00e-149 521.00
IUUC-Nfi-068319 Neosartorya fischeri 33.27 6.00e-148 516.00
IUUC-Ncr-068725 Neurospora crassa 35.93 1.00e-160 558.00
IUUC-Nle-069050 Nomascus leucogenys 36.94 1.00e-151 528.00
IUUC-Opr-070437 Ochotona princeps 41.25 4.00e-37 147.00
IUUC-Ont-071574 Oreochromis niloticus 36.95 2.00e-141 494.00
IUUC-Oan-072826 Ornithorhynchus anatinus 36.86 2.00e-154 538.00
IUUC-Ocu-073995 Oryctolagus cuniculus 37.02 3.00e-148 517.00
IUUC-Oba-075407 Oryza barthii 33.26 2.00e-126 444.00
IUUC-Obr-076451 Oryza brachyantha 36.24 6.00e-158 549.00
IUUC-Ogl-077535 Oryza glaberrima 35.68 4.00e-150 523.00
IUUC-Ogu-077995 Oryza glumaepatula 33.48 9.00e-131 459.00
IUUC-Oin-079431 Oryza indica 35.88 1.00e-151 528.00
IUUC-Olo-080495 Oryza longistaminata 32.46 1.00e-122 432.00
IUUC-Oni-082336 Oryza nivara 34.74 2.00e-140 491.00
IUUC-Opu-084028 Oryza punctata 34.05 3.00e-130 457.00
IUUC-Oru-084500 Oryza rufipogon 32.75 6.00e-123 432.00
IUUC-Osa-086242 Oryza sativa 35.77 1.00e-150 525.00
IUUC-Ola-086612 Oryzias latipes 36.05 7.00e-117 412.00
IUUC-Olu-087703 Ostreococcus lucimarinus 31.40 2.00e-114 404.00
IUUC-Oga-088572 Otolemur garnettii 37.05 4.00e-147 513.00
IUUC-Oar-090363 Ovis aries 37.69 7.00e-154 536.00
IUUC-Ptr-090477 Pan troglodytes 36.75 2.00e-149 520.00
IUUC-Pan-092914 Papio anubis 36.87 1.00e-151 528.00
IUUC-Psi-093019 Pelodiscus sinensis 34.58 6.00e-141 493.00
IUUC-Pma-094303 Petromyzon marinus 32.86 2.00e-108 385.00
IUUC-Pno-094938 Phaeosphaeria nodorum 35.58 3.00e-132 464.00
IUUC-Ppa-095720 Physcomitrella patens 34.03 7.00e-144 502.00
IUUC-Pfo-097034 Poecilia formosa 34.80 3.00e-132 464.00
IUUC-Pab-097669 Pongo abelii 36.63 7.00e-151 526.00
IUUC-Pop-098835 Populus trichocarpa 37.12 2.00e-155 541.00
IUUC-Pca-101097 Procavia capensis 33.42 7.00e-57 213.00
IUUC-Ppe-101430 Prunus persica 36.12 6.00e-159 552.00
IUUC-Pva-103152 Pteropus vampyrus 37.72 3.00e-153 533.00
IUUC-Pgr-103517 Puccinia graminis 33.57 7.00e-148 516.00
IUUC-Ptt-103697 Puccinia triticina 33.49 1.00e-114 405.00
IUUC-Pte-104121 Pyrenophora teres 35.12 2.00e-152 531.00
IUUC-Pyt-104672 Pyrenophora triticirepentis 34.89 1.00e-151 528.00
IUUC-Rno-105435 Rattus norvegicus 36.38 1.00e-152 532.00
IUUC-Sce-106202 Saccharomyces cerevisiae 40.06 1.00e-167 581.00
IUUC-Sha-107272 Sarcophilus harrisii 37.75 2.00e-143 501.00
IUUC-Sja-107744 Schizosaccharomyces japonicus 59.62 0.00e+00 1129.00
IUUC-Ssl-108618 Sclerotinia sclerotiorum 36.30 2.00e-175 607.00
IUUC-Smo-108762 Selaginella moellendorffii 34.71 2.00e-148 517.00
IUUC-Sit-110051 Setaria italica 35.03 1.00e-154 538.00
IUUC-Sly-111181 Solanum lycopersicum 36.26 2.00e-149 521.00
IUUC-Stu-112018 Solanum tuberosum 35.96 6.00e-148 516.00
IUUC-Sar-113348 Sorex araneus 37.50 2.00e-109 388.00
IUUC-Sbi-114282 Sorghum bicolor 35.32 1.00e-153 535.00
IUUC-Sre-114946 Sporisorium reilianum 34.43 6.00e-109 387.00
IUUC-Ssc-115287 Sus scrofa 37.41 2.00e-152 531.00
IUUC-Tgu-117138 Taeniopygia guttata 34.34 2.00e-122 431.00
IUUC-Tru-118232 Takifugu rubripes 36.44 3.00e-137 480.00
IUUC-Tsy-119502 Tarsius syrichta 29.96 2.00e-96 345.00
IUUC-Tni-120378 Tetraodon nigroviridis 36.17 1.00e-136 478.00
IUUC-Tca-121506 Theobroma cacao 35.78 7.00e-146 509.00
IUUC-Tre-122166 Trichoderma reesei 35.06 8.00e-164 569.00
IUUC-Tvi-122385 Trichoderma virens 35.10 4.00e-163 566.00
IUUC-Tae-122836 Triticum aestivum 36.10 6.00e-163 566.00
IUUC-Tur-126490 Triticum urartu 33.60 3.00e-130 457.00
IUUC-Tme-127157 Tuber melanosporum 38.83 8.00e-160 555.00
IUUC-Tbe-127981 Tupaia belangeri 39.34 7.00e-134 469.00
IUUC-Ttr-128886 Tursiops truncatus 36.50 1.00e-149 521.00
IUUC-Uma-129439 Ustilago maydis 32.48 8.00e-116 409.00
IUUC-Vda-129760 Verticillium dahliae 35.53 3.00e-160 557.00
IUUC-Vpa-130456 Vicugna pacos 36.09 5.00e-149 520.00
IUUC-Vvi-131086 Vitis vinifera 35.59 8.00e-156 542.00
IUUC-Xtr-131829 Xenopus tropicalis 36.15 4.00e-155 540.00
IUUC-Xma-133588 Xiphophorus maculatus 34.62 6.00e-133 466.00
IUUC-Yli-134328 Yarrowia lipolytica 35.26 5.00e-152 530.00
IUUC-Zma-135808 Zea mays 35.15 3.00e-151 527.00
Created Date 25-Jun-2017

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