iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121506

Ensembl Protein ID

EOY31694

UniProt Accession

A0A061GX92; A0A061GX92_THECC

Genbank Protein ID

EOY31694.1

Protein Name

Transducin family protein / WD-40 repeat family protein

Genbank Nucleotide ID

CM001887

Gene Name

TCM_038748

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_038748	EOY31694	EOY31694

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.00e-26	90.9	553	584
UBD/Beta-Prp	1.20e-49	170.1	102	356

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gHtd++t+l+f  d + l+s+s Dg++++WD+
   Q: 553  GHTDRITDLCFsEDgKWLLSSSMDGSLRIWDV 584
           8**********955699**************7 PP

UBD/Beta-Prp

   S: 21   dksllatgsrdgtikvwdvttgkl....lrslsgheaevtavkfspdgk..ilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshd 115
           +++++++  +dg + +w ++        +  +  + +++ ++ ++pd+     + gs+ + +++w++st k ++ +kg ++ ++s+ +sp  d++++G  d
   Q: 102  FGDHVLSVDADGNVFIWTFKGIEDnlapIGHIMLDAKFTPTCIMHPDTYlnKVLIGSQEGSLQLWNISTKKKLYEFKGWNSGICSCVSSPALDVIAVGCTD 202
           5788899999999999988875546677777777777788888888875668899********************************************** PP
   S: 116  rtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlq....t 211
            +i+v +++ ++++ + +   +g+v+ ++++ dg +ll+sG+  +++ +W+l+  +l    +++h++s+ sl f  n + l+s s d+++k+w +      
   Q: 203  GIIHVHNIRYDEEVITYKHSARGTVTALSFSTDGqSLLASGGSSGVISIWNLEKRRLQSVIREAHESSIISLHFFANEPVLMSSSADNSIKMWIFDtsdgD 303
           ***************999***************************************************************************88866555 PP
   S: 212  gecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhn 264
            + +r   gh+++++++rf  n+ +++s+++D+  r++ + +++  + l++++
   Q: 304  PRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRH 356
           66699999******************************888888888888777 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MGIFEPYRAI GYITSGVPFS VQRLGTETFL TVSVGKAFQI YNCSKLNLVL IGPQLPKKIR 60
ALASYRDFTF AAYGTDIAVF KRAHQVANWS RHNAKVNLLL LFGDHVLSVD ADGNVFIWTF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTGCTCTCC ATTGTTACAT TTTCTTCTCT TTGGTTTTGT TCTTGCTTTC TTTCTTTGTG 60
GATTTTGTAT TTTTCCTTTG TGCTTTCTTC TTTGCAGTTT TCTTCATATT TCCATTCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR024977--Apc4_WD40_dom
IPR007319--SSU_processome_Utp21
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF04192--Utp21
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0032040--C:small-subunit processome
GO:0006364--P:rRNA processing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001096	Aegilops tauschii	69.78	0.00e+00	1271.00
IUUC-Aml-002289	Ailuropoda melanoleuca	35.30	4.00e-147	514.00
IUUC-Atr-002859	Amborella trichopoda	70.88	0.00e+00	1211.00
IUUC-Apl-003505	Anas platyrhynchos	36.77	2.00e-142	498.00
IUUC-Aca-004339	Anolis carolinensis	35.31	3.00e-149	521.00
IUUC-Aly-005913	Arabidopsis lyrata	76.84	0.00e+00	1397.00
IUUC-Ath-006767	Arabidopsis thaliana	76.04	0.00e+00	1393.00
IUUC-Ago-007763	Ashbya gossypii	31.05	8.00e-115	407.00
IUUC-Acl-008275	Aspergillus clavatus	31.58	2.00e-82	299.00
IUUC-Afl-008457	Aspergillus flavus	31.49	4.00e-76	278.00
IUUC-Afu-008914	Aspergillus fumigatus	29.99	5.00e-87	315.00
IUUC-Ani-009225	Aspergillus nidulans	31.24	2.00e-90	326.00
IUUC-Aor-010046	Aspergillus oryzae	30.48	1.00e-102	367.00
IUUC-Ate-010337	Aspergillus terreus	29.52	3.00e-97	349.00
IUUC-Ame-010963	Astyanax mexicanus	36.57	7.00e-147	513.00
IUUC-Bgr-011973	Blumeria graminis	28.81	2.00e-97	350.00
IUUC-Bta-012462	Bos taurus	37.90	2.00e-150	526.00
IUUC-Bci-013940	Botrytis cinerea	30.60	2.00e-117	416.00
IUUC-Bdi-014725	Brachypodium distachyon	71.05	0.00e+00	1315.00
IUUC-Bol-016534	Brassica oleracea	77.17	0.00e+00	1399.00
IUUC-Bra-016781	Brassica rapa	75.11	0.00e+00	1365.00
IUUC-Cel-018581	Caenorhabditis elegans	26.45	8.00e-81	294.00
IUUC-Cja-019675	Callithrix jacchus	34.93	1.00e-154	540.00
IUUC-Cfa-020118	Canis familiaris	35.89	1.00e-147	516.00
IUUC-Cpo-021798	Cavia porcellus	35.23	4.00e-148	518.00
IUUC-Cre-022566	Chlamydomonas reinhardtii	33.78	8.00e-49	187.00
IUUC-Csa-023547	Chlorocebus sabaeus	35.40	5.00e-145	507.00
IUUC-Cho-024518	Choloepus hoffmanni	31.64	4.00e-100	358.00
IUUC-Cin-025339	Ciona intestinalis	32.51	2.00e-140	492.00
IUUC-Cgl-026476	Colletotrichum gloeosporioides	29.85	2.00e-100	359.00
IUUC-Cne-026859	Cryptococcus neoformans	33.11	2.00e-135	475.00
IUUC-Cme-027173	Cyanidioschyzon merolae	28.38	6.00e-85	308.00
IUUC-Dre-027733	Danio rerio	35.26	2.00e-146	512.00
IUUC-Dno-029439	Dasypus novemcinctus	35.56	3.00e-144	505.00
IUUC-Dor-030329	Dipodomys ordii	33.12	1.00e-59	223.00
IUUC-Dse-031511	Dothistroma septosporum	29.90	8.00e-94	337.00
IUUC-Dme-031694	Drosophila melanogaster	32.69	4.00e-128	451.00
IUUC-Ete-032930	Echinops telfairi	36.02	2.00e-126	445.00
IUUC-Eca-033302	Equus caballus	35.48	4.00e-144	504.00
IUUC-Eeu-034516	Erinaceus europaeus	35.33	3.00e-154	538.00
IUUC-Fca-036064	Felis catus	35.48	8.00e-147	513.00
IUUC-Fal-037024	Ficedula albicollis	36.94	1.00e-157	549.00
IUUC-Fox-037787	Fusarium oxysporum	30.13	2.00e-94	340.00
IUUC-Fso-038378	Fusarium solani	30.29	6.00e-99	354.00
IUUC-Gmo-039637	Gadus morhua	36.17	2.00e-79	289.00
IUUC-Ggr-040108	Gaeumannomyces graminis	29.38	3.00e-95	342.00
IUUC-Gga-040982	Gallus gallus	35.73	3.00e-163	568.00
IUUC-Gac-041565	Gasterosteus aculeatus	34.83	7.00e-137	480.00
IUUC-Gma-043414	Glycine max	78.72	0.00e+00	1434.00
IUUC-Ggo-045463	Gorilla gorilla	35.19	6.00e-146	511.00
IUUC-Hsa-045675	Homo sapiens	35.15	1.00e-147	516.00
IUUC-Hvu-047352	Hordeum vulgare	69.90	0.00e+00	1180.00
IUUC-Itr-048088	Ictidomys tridecemlineatus	35.08	2.00e-156	545.00
IUUC-Kpa-049164	Komagataella pastoris	32.04	7.00e-112	397.00
IUUC-Lch-050476	Latimeria chalumnae	35.74	3.00e-156	545.00
IUUC-Lpe-051556	Leersia perrieri	59.82	0.00e+00	1021.00
IUUC-Loc-052820	Lepisosteus oculatus	35.73	5.00e-153	534.00
IUUC-Lma-052961	Leptosphaeria maculans	29.38	5.00e-93	335.00
IUUC-Laf-054006	Loxodonta africana	34.39	3.00e-138	484.00
IUUC-Mcc-055037	Macaca mulatta	34.93	2.00e-146	512.00
IUUC-Mor-057280	Magnaporthe oryzae	28.82	3.00e-96	345.00
IUUC-Mpo-057408	Magnaporthe poae	28.98	3.00e-90	326.00
IUUC-Mtr-058473	Medicago truncatula	78.38	0.00e+00	1445.00
IUUC-Mla-058892	Melampsora laricipopulina	32.95	5.00e-110	391.00
IUUC-Mga-059598	Meleagris gallopavo	31.66	6.00e-113	400.00
IUUC-Mvi-060334	Microbotryum violaceum	33.96	4.00e-112	398.00
IUUC-Mmr-061239	Microcebus murinus	35.52	4.00e-146	511.00
IUUC-Mdo-062471	Monodelphis domestica	35.45	2.00e-144	505.00
IUUC-Mmu-063872	Mus musculus	35.11	4.00e-154	538.00
IUUC-Mac-064631	Musa acuminata	73.73	0.00e+00	1219.00
IUUC-Mpu-066039	Mustela putorius furo	35.56	3.00e-158	551.00
IUUC-Mlu-067485	Myotis lucifugus	35.95	1.00e-147	516.00
IUUC-Nfi-068319	Neosartorya fischeri	29.16	2.00e-98	353.00
IUUC-Ncr-068725	Neurospora crassa	29.96	2.00e-100	360.00
IUUC-Nle-069050	Nomascus leucogenys	35.04	1.00e-147	516.00
IUUC-Opr-070437	Ochotona princeps	32.66	5.00e-46	178.00
IUUC-Ont-071574	Oreochromis niloticus	35.35	1.00e-143	503.00
IUUC-Oan-072826	Ornithorhynchus anatinus	37.20	4.00e-159	554.00
IUUC-Ocu-073995	Oryctolagus cuniculus	36.22	3.00e-142	498.00
IUUC-Oba-075407	Oryza barthii	65.75	0.00e+00	1151.00
IUUC-Obr-076451	Oryza brachyantha	73.11	0.00e+00	1380.00
IUUC-Ogl-077535	Oryza glaberrima	72.27	0.00e+00	1328.00
IUUC-Ogu-077995	Oryza glumaepatula	64.90	0.00e+00	1151.00
IUUC-Oin-079431	Oryza indica	72.67	0.00e+00	1335.00
IUUC-Olo-080495	Oryza longistaminata	64.17	0.00e+00	1124.00
IUUC-Oni-082336	Oryza nivara	69.59	0.00e+00	1250.00
IUUC-Opu-084028	Oryza punctata	63.47	0.00e+00	1058.00
IUUC-Oru-084500	Oryza rufipogon	64.86	0.00e+00	1147.00
IUUC-Osa-086242	Oryza sativa	72.78	0.00e+00	1337.00
IUUC-Ola-086612	Oryzias latipes	35.43	5.00e-114	404.00
IUUC-Olu-087703	Ostreococcus lucimarinus	35.67	5.00e-156	544.00
IUUC-Oga-088572	Otolemur garnettii	35.64	1.00e-148	520.00
IUUC-Oar-090363	Ovis aries	36.35	2.00e-152	532.00
IUUC-Ptr-090477	Pan troglodytes	35.15	4.00e-146	511.00
IUUC-Pan-092914	Papio anubis	34.93	2.00e-147	516.00
IUUC-Psi-093019	Pelodiscus sinensis	34.86	3.00e-144	505.00
IUUC-Pma-094303	Petromyzon marinus	33.90	7.00e-124	437.00
IUUC-Pno-094938	Phaeosphaeria nodorum	29.11	2.00e-86	313.00
IUUC-Ppa-095720	Physcomitrella patens	54.62	0.00e+00	988.00
IUUC-Pfo-097034	Poecilia formosa	34.63	6.00e-133	467.00
IUUC-Pab-097669	Pongo abelii	35.04	3.00e-147	515.00
IUUC-Pop-098835	Populus trichocarpa	81.23	0.00e+00	1495.00
IUUC-Pca-101097	Procavia capensis	36.13	1.00e-60	227.00
IUUC-Ppe-101430	Prunus persica	81.72	0.00e+00	1532.00
IUUC-Pva-103152	Pteropus vampyrus	35.92	4.00e-150	524.00
IUUC-Pgr-103517	Puccinia graminis	30.65	2.00e-128	452.00
IUUC-Ptt-103697	Puccinia triticina	30.65	2.00e-96	345.00
IUUC-Pte-104121	Pyrenophora teres	28.36	2.00e-92	333.00
IUUC-Pyt-104672	Pyrenophora triticirepentis	28.39	2.00e-91	330.00
IUUC-Rno-105435	Rattus norvegicus	34.65	1.00e-151	529.00
IUUC-Sce-106202	Saccharomyces cerevisiae	31.44	5.00e-105	375.00
IUUC-Sha-107272	Sarcophilus harrisii	37.70	3.00e-142	498.00
IUUC-Sja-107744	Schizosaccharomyces japonicus	35.95	1.00e-155	543.00
IUUC-Spo-108256	Schizosaccharomyces pombe	35.78	1.00e-154	539.00
IUUC-Ssl-108618	Sclerotinia sclerotiorum	30.31	5.00e-110	391.00
IUUC-Smo-108762	Selaginella moellendorffii	55.37	0.00e+00	1009.00
IUUC-Sit-110051	Setaria italica	72.37	0.00e+00	1343.00
IUUC-Sly-111181	Solanum lycopersicum	76.87	0.00e+00	1400.00
IUUC-Stu-112018	Solanum tuberosum	76.79	0.00e+00	1396.00
IUUC-Sar-113348	Sorex araneus	34.62	3.00e-99	355.00
IUUC-Sbi-114282	Sorghum bicolor	72.01	0.00e+00	1359.00
IUUC-Sre-114946	Sporisorium reilianum	31.85	1.00e-86	314.00
IUUC-Ssc-115287	Sus scrofa	36.07	5.00e-150	524.00
IUUC-Tgu-117138	Taeniopygia guttata	35.38	7.00e-130	457.00
IUUC-Tru-118232	Takifugu rubripes	34.99	4.00e-139	488.00
IUUC-Tsy-119502	Tarsius syrichta	28.99	3.00e-101	362.00
IUUC-Tni-120378	Tetraodon nigroviridis	37.36	3.00e-142	498.00
IUUC-Tre-122166	Trichoderma reesei	29.74	7.00e-106	377.00
IUUC-Tvi-122385	Trichoderma virens	30.36	2.00e-107	383.00
IUUC-Tae-122836	Triticum aestivum	70.18	0.00e+00	1351.00
IUUC-Tur-126490	Triticum urartu	59.91	0.00e+00	1045.00
IUUC-Tme-127157	Tuber melanosporum	32.95	1.00e-114	406.00
IUUC-Tbe-127981	Tupaia belangeri	38.55	3.00e-129	455.00
IUUC-Ttr-128886	Tursiops truncatus	35.12	3.00e-145	508.00
IUUC-Uma-129439	Ustilago maydis	29.71	2.00e-89	323.00
IUUC-Vda-129760	Verticillium dahliae	29.70	5.00e-105	375.00
IUUC-Vpa-130456	Vicugna pacos	36.25	2.00e-149	522.00
IUUC-Vvi-131086	Vitis vinifera	81.50	0.00e+00	1529.00
IUUC-Xtr-131829	Xenopus tropicalis	37.51	8.00e-166	576.00
IUUC-Xma-133588	Xiphophorus maculatus	38.15	9.00e-132	463.00
IUUC-Yli-134328	Yarrowia lipolytica	30.89	3.00e-103	369.00
IUUC-Zma-135808	Zea mays	71.24	0.00e+00	1347.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence