iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Smo-109208

Ensembl Protein ID

EFJ35546

UniProt Accession

D8QY43; D8QY43_SELML

Genbank Protein ID

EFJ35546.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377568

Gene Name

SELMODRAFT_79631

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_79631	EFJ35546	EFJ35546

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.60e-34	115.4	452	485
UBD/Beta-Prp	1.20e-61	209.2	147	522

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtg 33
           H + v++++   +d   vs+s Dg++ vWDl+++
   Q: 452  HVEVVNGVQVrkNDSECVSCSSDGSCIVWDLTRF 485
           8899*****99988999*************9875 PP

UBD/Beta-Prp

   S: 10   ksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheae........................................................ 54
           +++ +cv+f + ++  +++ +++++++w++++g+   + ++++ +                                                        
   Q: 147  IDYAQCVCFFNCTNTKLVTAASAKLTIWEFDEGNRQLRPYDCQLGkirrvlqtividskddyvyvgtqtgdvlqvslgpklfqnhgpkqklcmgvqstist 247
           68899****999999999999**************88889999999999999999999999**************************************** PP
   S: 55   ...............................................................................vtavkfspdgk.ilvtgseDrt 75
                                                                                          +++v f + ++ +++t+s D+ 
   Q: 248  pfddllvgggdgnivllrsgtlktvsstrvhgsvtamangnadqsgsfeffvgtsksnmydakrnmmasqlihtchydkINDVAFPSGYSeVFATCSMDD- 347
           *************************************************************************************999988********9. PP
   S: 76   ikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl..ktgkllrt 174
           i++w l+++  +  ++  +++ +sl+f+p+g++l+sG +d  ir +  +tg+ l+++l+ h+  v+ ++  +d+  ++sG+ D++vr+W++   + +l+ t
   Q: 348  IRIWQLEKCRELLRIQVPNQKCMSLAFMPDGKSLISGWNDGRIRAFGPQTGKLLYTILNAHKLGVTAITGTSDSGKIISGGVDGQVRVWRIgpHSHSLIAT 448
           8******************************************************************************************999******* PP
   S: 175  ltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWd 250
           +++ h + v+ +++++n  e+vs+s dg+ ++wdl + +  +++ + ++++k ++ +p++  l++++ D+ i  Wd
   Q: 449  MKE-HVEVVNGVQVRKNDSECVSCSSDGSCIVWDLTRFTRNNSMFA-STFFKAIQYHPDESQLLTTGTDRKITYWD 522
           *99.*******************************98876666665.679999**********************8 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MSRPLPLGSV IGYSGTVPGG MVLHPDKSTL VYALGTCIVL RHRGDDHNQE FLQGHSNKVS 60
CLAISRSGKY LATGQVSYMG FTTTIIIWDL EERRILHQLN LHKVKVESLS FSPCETFVAS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGCGTC CACTGCCCTT GGGAAGCGTG ATCGGCTACA GCGGAACCGT GCCTGGTGGC 60
ATGGTTCTTC ACCCGGACAA GTCGACGCTC GTCTATGCGC TTGGGACTTG CATTGTTTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033015--CFAP52
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

smo:SELMODRAFT_79631

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cpo-021926	Cavia porcellus	44.78	3.00e-158	551.00
IUUC-Dre-028268	Danio rerio	45.65	2.00e-164	571.00
IUUC-Dno-029202	Dasypus novemcinctus	40.96	4.00e-139	487.00
IUUC-Dor-030197	Dipodomys ordii	39.70	5.00e-99	354.00
IUUC-Fal-037660	Ficedula albicollis	23.08	6.00e-23	103.00
IUUC-Gmo-039448	Gadus morhua	48.93	8.00e-82	297.00
IUUC-Gac-042074	Gasterosteus aculeatus	40.36	9.00e-133	466.00
IUUC-Loc-052080	Lepisosteus oculatus	45.28	3.00e-163	567.00
IUUC-Ont-071609	Oreochromis niloticus	44.07	4.00e-155	540.00
IUUC-Ola-086464	Oryzias latipes	44.37	5.00e-152	530.00
IUUC-Psi-093270	Pelodiscus sinensis	44.76	4.00e-145	507.00
IUUC-Sha-107094	Sarcophilus harrisii	24.18	5.00e-27	117.00
IUUC-Ssc-116319	Sus scrofa	45.90	3.00e-32	129.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence