iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-044318

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000839

Gene Name

LOC100789746; GLYMA_06G016500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA06G01920	GLYMA06G01920.1	GLYMA06G01920.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	6.70e-25	88.6	30	107

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.....tcPvtrqplteedlvPnltlrrliqawceenss 74
           ++++f+Cp+++++MrdPv+l++G+t++r++Iekw++++++      cP+t ++l++++l P+ +lr++i++w ++n++
   Q: 30   LYDAFVCPLTNQVMRDPVTLENGQTFEREAIEKWFKECREsgrklVCPLTLHELRSTELNPSMALRNTIEEWTARNEV 107
           5899*******************************777777778******************************9976 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MMAASWDGAN DPGSQSDDSF HFERLHIEPL YDAFVCPLTN QVMRDPVTLE NGQTFEREAI 60
EKWFKECRES GRKLVCPLTL HELRSTELNP SMALRNTIEE WTARNEVAQL DMAHRSLNMG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCAACCTGT AATTTTCGTT GGTCCGGGTG GATGATAGCT CCATCTTCTC TCTTTACCTT 60
TGTCCGACCT GATGACTATT ATAATCCAGT CAACCTCTCT CTGCATTTTC TATTTTTTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR011987--ATPase_V1-cplx_hsu_C
IPR001263--PInositide-3_kin_accessory_dom
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

gmx:100789746

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000143	Aegilops tauschii	66.22	0.00e+00	1068.00
IUUC-Atr-002916	Amborella trichopoda	67.94	0.00e+00	1096.00
IUUC-Aly-005480	Arabidopsis lyrata	64.86	0.00e+00	1005.00
IUUC-Ath-007569	Arabidopsis thaliana	65.48	0.00e+00	1015.00
IUUC-Bdi-014487	Brachypodium distachyon	64.70	0.00e+00	1041.00
IUUC-Hvu-047783	Hordeum vulgare	66.42	0.00e+00	1079.00
IUUC-Mtr-058511	Medicago truncatula	90.17	0.00e+00	1467.00
IUUC-Nfi-068405	Neosartorya fischeri	26.88	3.00e-03	38.10
IUUC-Olo-080644	Oryza longistaminata	61.01	0.00e+00	948.00
IUUC-Ppa-096021	Physcomitrella patens	50.98	0.00e+00	786.00
IUUC-Pop-099966	Populus trichocarpa	82.78	0.00e+00	1351.00
IUUC-Smo-109219	Selaginella moellendorffii	49.75	0.00e+00	723.00
IUUC-Sly-111702	Solanum lycopersicum	79.02	0.00e+00	1177.00
IUUC-Stu-111962	Solanum tuberosum	78.47	0.00e+00	1276.00
IUUC-Sbi-113974	Sorghum bicolor	54.55	0.00e+00	843.00
IUUC-Ssc-115521	Sus scrofa	27.03	4.00e-07	49.30
IUUC-Tca-121113	Theobroma cacao	83.39	0.00e+00	1376.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence