iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121113

Ensembl Protein ID

EOY15311

UniProt Accession

A0A061FE30; A0A061FE30_THECC

Genbank Protein ID

EOY15311.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM001886

Gene Name

TCM_034416

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_034416	EOY15311	EOY15311

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	6.90e-26	91.1	29	105

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.....tcPvtrqplteedlvPnltlrrliqawceens 73
           ++++f+Cp+++++MrdPv+l++G+t++r++Iekw++++++      cPvt ++l++ dl+P+++lr++i++w  +n+
   Q: 29   IYDAFVCPLTKQVMRDPVTLENGQTFEREAIEKWFNECKEngrklICPVTLKELRSIDLKPSIALRNTIEEWTTRNE 105
           799********************************888888888*****************************9987 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MAGSWDRSYD PGSQSDDSHH FERLHIEPIY DAFVCPLTKQ VMRDPVTLEN GQTFEREAIE 60
KWFNECKENG RKLICPVTLK ELRSIDLKPS IALRNTIEEW TTRNEAAQLD MARRSLNMGS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTCCTGGCT GTTGCTGCTG TTGCGGCAGT GATATTTTAA AAATAAGCCA ATAAGGAAAA 60
AGAAAAGAGC AAAAATATAT CATGTTTGTT GAAGCTTTGC GTGGGGTCAC CGGAGGTTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000143	Aegilops tauschii	66.67	0.00e+00	1069.00
IUUC-Atr-002916	Amborella trichopoda	68.43	0.00e+00	1092.00
IUUC-Aly-005480	Arabidopsis lyrata	67.32	0.00e+00	1046.00
IUUC-Ath-007569	Arabidopsis thaliana	67.69	0.00e+00	1057.00
IUUC-Bdi-014487	Brachypodium distachyon	65.31	0.00e+00	1044.00
IUUC-Bol-016384	Brassica oleracea	65.41	0.00e+00	944.00
IUUC-Bra-017058	Brassica rapa	65.53	0.00e+00	974.00
IUUC-Gma-044318	Glycine max	83.39	0.00e+00	1371.00
IUUC-Hvu-047783	Hordeum vulgare	67.04	0.00e+00	1081.00
IUUC-Lpe-050971	Leersia perrieri	67.04	0.00e+00	1025.00
IUUC-Mtr-058511	Medicago truncatula	82.66	0.00e+00	1329.00
IUUC-Mac-064911	Musa acuminata	66.30	0.00e+00	1018.00
IUUC-Oba-075225	Oryza barthii	66.54	0.00e+00	1058.00
IUUC-Obr-076103	Oryza brachyantha	66.54	0.00e+00	1019.00
IUUC-Ogl-077529	Oryza glaberrima	66.54	0.00e+00	1056.00
IUUC-Ogu-078735	Oryza glumaepatula	66.54	0.00e+00	1058.00
IUUC-Oin-079422	Oryza indica	66.54	0.00e+00	1045.00
IUUC-Olo-080644	Oryza longistaminata	61.62	0.00e+00	944.00
IUUC-Ome-081455	Oryza meridionalis	66.17	0.00e+00	1052.00
IUUC-Oni-082690	Oryza nivara	66.42	0.00e+00	1042.00
IUUC-Opu-083157	Oryza punctata	66.91	0.00e+00	1061.00
IUUC-Oru-085058	Oryza rufipogon	66.54	0.00e+00	1045.00
IUUC-Osa-086000	Oryza sativa	66.54	0.00e+00	1045.00
IUUC-Ppa-096021	Physcomitrella patens	50.86	0.00e+00	775.00
IUUC-Pop-099966	Populus trichocarpa	85.98	0.00e+00	1378.00
IUUC-Ppe-101973	Prunus persica	82.90	0.00e+00	1328.00
IUUC-Smo-109219	Selaginella moellendorffii	49.75	0.00e+00	710.00
IUUC-Sit-110490	Setaria italica	67.53	0.00e+00	1055.00
IUUC-Sly-111702	Solanum lycopersicum	79.53	0.00e+00	1181.00
IUUC-Stu-111962	Solanum tuberosum	79.58	0.00e+00	1286.00
IUUC-Sbi-113974	Sorghum bicolor	54.93	0.00e+00	821.00
IUUC-Ssc-115521	Sus scrofa	27.73	1.00e-08	53.50
IUUC-Tae-125341	Triticum aestivum	56.16	0.00e+00	794.00
IUUC-Tur-126573	Triticum urartu	66.67	0.00e+00	1071.00
IUUC-Vvi-131623	Vitis vinifera	84.50	0.00e+00	1421.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence