iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-001182

Ensembl Protein ID

EMT32949

UniProt Accession

M8CEU5; M8CEU5_AEGTA

Genbank Protein ID

EMT32949.1

Protein Name

WD repeat-containing protein

Genbank Nucleotide ID

KD500983

Gene Name

F775_17640

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_17640	EMT32949	EMT32949

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-07	32.2	261	294

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd..tllvsGsdDgtikvWDlrt 32
           H++++++++f ++  ++l+++s D t  +WD+r 
   Q: 261  HEERINSIDFhPEkpHMLATSSTDRTACIWDVRN 294
           999********666588**************986 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MAEDGLNDYE RLRQENIRRN QEKLAPLRRK ADELSAAIRL AKPKRPYQAK PKPKAPTGPV 60
RSSGRARGVA PDNLPPDLRS TRLSPSLASS ILGAPPPEGA KVRAAGDFDA GRDMVLMPAH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGAGG ACGGCCTCAA CGACTACGAG CGCCTTCGCC AGGAGAACAT CCGCCGCAAC 60
CAGGAAAAGC TCGCCCCCCT CCGCCGCAAG GCCGACGAGC TCTCCGCCGC CATCCGGCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0853--WD repeat

Interpro

IPR033052--Cmr1/WDR76
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0006974--P:cellular response to DNA damage stimulus

KEGG

ats:F775_17640

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002605	Amborella trichopoda	33.42	2.00e-46	179.00
IUUC-Aly-005444	Arabidopsis lyrata	36.22	9.00e-60	223.00
IUUC-Ath-007550	Arabidopsis thaliana	35.71	7.00e-58	217.00
IUUC-Bgr-012236	Blumeria graminis	28.04	2.00e-16	80.10
IUUC-Bdi-015040	Brachypodium distachyon	53.54	9.00e-96	343.00
IUUC-Bol-016546	Brassica oleracea	36.56	3.00e-56	212.00
IUUC-Bra-018032	Brassica rapa	36.62	3.00e-55	208.00
IUUC-Gma-042915	Glycine max	34.46	1.00e-68	253.00
IUUC-Kpa-049275	Komagataella pastoris	23.91	7.00e-09	54.70
IUUC-Lpe-051708	Leersia perrieri	52.10	2.00e-91	328.00
IUUC-Mtr-058451	Medicago truncatula	33.96	7.00e-71	260.00
IUUC-Oba-075402	Oryza barthii	48.97	7.00e-106	376.00
IUUC-Ogl-077685	Oryza glaberrima	53.96	7.00e-100	356.00
IUUC-Ogu-078331	Oryza glumaepatula	53.96	2.00e-99	355.00
IUUC-Oin-079698	Oryza indica	52.83	2.00e-106	378.00
IUUC-Ome-081944	Oryza meridionalis	47.69	5.00e-96	343.00
IUUC-Oni-082721	Oryza nivara	48.64	3.00e-101	361.00
IUUC-Opu-083372	Oryza punctata	54.98	6.00e-100	357.00
IUUC-Oru-084578	Oryza rufipogon	53.96	2.00e-99	355.00
IUUC-Osa-086177	Oryza sativa	53.96	2.00e-99	355.00
IUUC-Pno-094824	Phaeosphaeria nodorum	22.96	7.00e-17	81.30
IUUC-Pop-099337	Populus trichocarpa	38.04	3.00e-67	248.00
IUUC-Ppe-101256	Prunus persica	34.78	5.00e-48	184.00
IUUC-Smo-109176	Selaginella moellendorffii	34.58	1.00e-41	162.00
IUUC-Sit-109704	Setaria italica	47.51	1.00e-98	353.00
IUUC-Sly-111853	Solanum lycopersicum	37.89	1.00e-60	226.00
IUUC-Stu-112482	Solanum tuberosum	37.58	5.00e-61	227.00
IUUC-Sbi-114517	Sorghum bicolor	45.18	8.00e-86	310.00
IUUC-Tca-121273	Theobroma cacao	34.47	2.00e-58	219.00
IUUC-Tae-123579	Triticum aestivum	91.34	0.00e+00	818.00
IUUC-Vvi-131430	Vitis vinifera	39.76	5.00e-66	244.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence