iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014063

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000883

Gene Name

LOC100843300; BRADI_4g20910

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI4G20910	BRADI4G20910.1	BRADI4G20910.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.10e-24	84.2	272	303
E3 adaptor/Cullin RING/APC_C/CDC20	6.80e-124	413.6	137	446

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDl 30
           gH+ +v++l++  s+  l+sG++D+ +++WD+
   Q: 272  GHSQEVCGLKWsgSGQQLASGGNDNLLHIWDV 303
           8**********976699**************8 PP

E3 adaptor/Cullin RING/APC_C/CDC20

   S: 2    ekvldapelrddfylnLldWssknvlavaLgssvylwsaktgdvskladl.eekdlvtsvswieegtllavGtkkgeveiyDveekkkvrtltg. 94
           e+ ldap+l dd+ylnL+dW+s+nvl++aLg ++ylw+a++g+ s+l  + e+k  +tsvsw ++g +la+G +++ ++++D+++++ +rtl+g 
   Q: 137  ERTLDAPDLVDDYYLNLMDWGSSNVLSIALGDTMYLWEASSGSTSELVTVdEDKGPITSVSWAPDGRHLAIGLNSSDIQLWDTSSSRLLRTLKGv 231
           689***********************************************777889************************************664 PP
   S: 95   hsarvgaLsWnaevlssGsrdgeilhrdvrvkelklstlqahaqevCGlkwnedaklLasGGnDnsvsvwdassse.........Plkkfkehka 180
           h +rvg+L+Wn+++l++G+ dg+i+ +dvr++++ ++t+q+h+qevCGlkw+ ++++LasGGnDn +++wd    +          l++ ++h+a
   Q: 232  HESRVGSLAWNNNILTTGGMDGRIVNNDVRIRDHAVQTYQGHSQEVCGLKWSGSGQQLASGGNDNLLHIWDVPMASsmpsagrnqWLHRLEDHTA 326
           899********************************************************************86555555566655688999**** PP
   S: 181  avkaiawsPwqkslLasGGGtaDrcikfwntltgalleeidtgsqvcsllwskkskelvsthGfaenkitlwkypslskvaelkgheaRvlslal 275
           avka+aw+P+q++lLa+GGG +Drcikfwnt tga+l+++dtgsqvc llw k+++el+s+hGf++n++tlwkyps+ k+ael+gh++Rvl +a 
   Q: 327  AVKALAWCPFQSNLLATGGGGSDRCIKFWNTHTGACLNSVDTGSQVCALLWNKNERELLSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVLFMAQ 421
           *********************************************************************************************** PP
   S: 276  spdgeaivtaagDetlrfwklfdkk 300
           spdg ++++aa+Detlrfw++f + 
   Q: 422  SPDGCTVASAAADETLRFWNVFGTP 446
           **********************865 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MDAGYRSISS EKSRAVQRPP LQEAGSRPYM PSLSTSSRDP SAKCYGDRFI PNRSAMDMDM 60
AHYLLTEPKK DKENMASSPS KEAYRKLLTE KLLNNRTRIL AFRNKPPEPE NILAADTVSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGTCTTTCT CTCCTTCTCT CCCCCCCTGC TCGCCGCCGC CTCCCCTCGC CGATCCGGGG 60
GAGACGAGAC TCTCTAGATC CCTCGCTGTT CCTCGTGTTT GACCAGATCC TCGTTAATTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR033010--Cdc20/Fizzy
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0097027--F:ubiquitin-protein transferase activator activity
GO:1904668--P:positive regulation of ubiquitin protein ligase activity

KEGG

bdi:100843300

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006253	Arabidopsis lyrata	70.13	0.00e+00	668.00
IUUC-Ath-006795	Arabidopsis thaliana	70.40	0.00e+00	668.00
IUUC-Ola-086907	Oryzias latipes	45.07	1.00e-94	339.00
IUUC-Sha-107472	Sarcophilus harrisii	48.43	1.00e-103	369.00
IUUC-Smo-108922	Selaginella moellendorffii	59.01	1.00e-153	535.00
IUUC-Tru-118184	Takifugu rubripes	41.37	5.00e-90	323.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence