iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Smo-109027

Ensembl Protein ID

EFJ29191

UniProt Accession

D8RFV8; D8RFV8_SELML

Genbank Protein ID

EFJ13752.1; EFJ29191.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377631; GL377578

Gene Name

SELMODRAFT_121776; SELMODRAFT_92939

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_92939	EFJ29191	EFJ29191

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.10e-28	97.8	226	255
E3 adaptor/Cullin RING/APC_C/CDC20	2.20e-129	431.8	90	397

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           H+ +v++l++ ++   l+sG++D+ ++vWD
   Q: 226  HQQEVCGLKWsPSgQQLASGGNDNLLYVWD 255
           99*********66699************** PP

E3 adaptor/Cullin RING/APC_C/CDC20

   S: 1    pekvldapelrddfylnLldWssknvlavaLgssvylwsaktgdvskladl.eekdlvtsvswieegtllavGtkkgeveiyDveekkkvrtltghsarvg 100
           pe+ ldape+ dd+ylnLldW+++n+lavaLg++vylw+a+tg +++l+++ e++  vtsvsw ++g++++vG +++ v+++D+ + ++vr+l+ h+arvg
   Q: 90   PERTLDAPEILDDYYLNLLDWGTNNILAVALGHTVYLWNATTGGIEELMQVsEDDGPVTSVSWAPDGKHISVGLNNADVQLWDAFSLRQVRSLKAHTARVG 190
           6799***********************************************555568******************************************** PP
   S: 101  aLsWnaevlssGsrdgeilhrdvrvkelklstlqahaqevCGlkwnedaklLasGGnDnsvsvwdassse......PlkkfkehkaavkaiawsPwqkslL 195
           +L+Wn  +ls+G+rd+ i  +dvr++e+ + +++ah+qevCGlkw+ ++++LasGGnDn + vwda+          l++ +eh+aavka+aw+P+q++lL
   Q: 191  SLAWNGPILSTGGRDNVIFNHDVRIREHVTGKMAAHQQEVCGLKWSPSGQQLASGGNDNLLYVWDAAAAAsrgnstYLHRLDEHQAAVKALAWCPFQSNLL 291
           *****************************************************************98766667776889999******************* PP
   S: 196  asGGGtaDrcikfwntltgalleeidtgsqvcsllwskkskelvsthGfaenkitlwkypslskvaelkgheaRvlslalspdgeaivtaagDetlrfwkl 296
           asGGGtaDrcikfwnt tga+++++dt sqvc l wsk+++el+s+hGf++n+++lwkyps+ k+ael+gh++Rvl++a spdg ++++aagDetlrfw++
   Q: 292  ASGGGTADRCIKFWNTHTGACIQSVDTASQVCALQWSKHERELLSSHGFSQNQLILWKYPSMVKMAELTGHTSRVLHMAQSPDGYTVASAAGDETLRFWQV 392
           ***************************************************************************************************** PP
   S: 297  fdkkk 301
           f +  
   Q: 393  FGTPD 397
           *8755 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MLVLGKENSQ LQQQPLRSDC SQEEYKKQLA ENLLRDANIF QKKSRILAFK SKPPPPPEGF 60
ERESRLLYSE NTAPGASKPR RMFRQIPQAP ERTLDAPEIL DDYYLNLLDW GTNNILAVAL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTTGTTC TTGGAAAGGA GAATTCGCAG CTCCAGCAGC AGCCGCTTCG ATCCGACTGC 60
TCCCAGGAAG AGTACAAGAA GCAACTGGCC GAGAATCTCT TGCGCGACGC CAATATTTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR033010--Cdc20/Fizzy
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0097027--F:ubiquitin-protein transferase activator activity
GO:1904668--P:positive regulation of ubiquitin protein ligase activity

KEGG

smo:SELMODRAFT_121776; smo:SELMODRAFT_92939

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence