iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058426

Ensembl Protein ID

AES88710

UniProt Accession

G7JRI8; A0A0C3WXJ2; G7JRI8_MEDTR

Genbank Protein ID

AES88710.2

Protein Name

RNA-binding (RRM/RBD/RNP motif) family protein

Genbank Nucleotide ID

CM001220

Gene Name

MTR_4g061180

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_4g061180	AES88710	AES88710

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	39.16	2.00e-48	189.00	IUUC-Sce-106312

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MSDEGERTCP LCAEEMDLTD QQLKPCRCGY EICVWCWHHI MDMAEKDDTD GRCPACRSPY 60
DKEKIVGTAA KCERLLNEMN LEKKVKNQKA KSKSSDGRKQ LSSVRVIQRN LVYIVGLPLD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAACACCATC ATAATAGTAA TTCATATCAT AATCCAAACA GCACCTTCTT CTCTCTCTCT 60
TTTAAAAAGA CACCCTGTGG TGCGCTTTCT CTCTCTAAAC ATATCGCTCT CTATTTCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0694--RNA-binding

Interpro

IPR034261--CNOT4_RRM
IPR012677--Nucleotide-bd_a/b_plait
IPR000504--RRM_dom
IPR003954--RRM_dom_euk
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50102--RRM
PS50089--ZF_RING_2

Pfam

PF00076--RRM_1

SMART

SM00360--RRM
SM00361--RRM_1

Gene Ontology

GO:0000166--F:nucleotide binding
GO:0003723--F:RNA binding
GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_4g061180

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000464	Aegilops tauschii	62.30	2.00e-114	407.00
IUUC-Aml-002384	Ailuropoda melanoleuca	43.35	3.00e-52	199.00
IUUC-Atr-002462	Amborella trichopoda	64.20	1.00e-130	460.00
IUUC-Apl-003756	Anas platyrhynchos	43.35	3.00e-53	202.00
IUUC-Aca-004643	Anolis carolinensis	43.35	3.00e-53	202.00
IUUC-Aly-006093	Arabidopsis lyrata	66.56	4.00e-132	464.00
IUUC-Ath-007371	Arabidopsis thaliana	45.42	0.00e+00	787.00
IUUC-Ago-007799	Ashbya gossypii	40.00	3.00e-49	189.00
IUUC-Acl-008077	Aspergillus clavatus	34.26	1.00e-45	178.00
IUUC-Afl-008720	Aspergillus flavus	33.44	8.00e-49	189.00
IUUC-Afu-008905	Aspergillus fumigatus	33.23	2.00e-45	177.00
IUUC-Ani-009264	Aspergillus nidulans	33.78	1.00e-29	124.00
IUUC-Ang-009537	Aspergillus niger	34.69	1.00e-48	188.00
IUUC-Aor-010123	Aspergillus oryzae	29.26	3.00e-33	137.00
IUUC-Ate-010409	Aspergillus terreus	32.30	1.00e-45	179.00
IUUC-Ame-011538	Astyanax mexicanus	42.02	7.00e-44	171.00
IUUC-Bgr-012062	Blumeria graminis	35.11	4.00e-50	193.00
IUUC-Bta-012419	Bos taurus	43.35	7.00e-53	201.00
IUUC-Bci-013633	Botrytis cinerea	38.68	2.00e-49	191.00
IUUC-Bdi-014913	Brachypodium distachyon	61.36	9.00e-116	411.00
IUUC-Bol-016407	Brassica oleracea	57.58	3.00e-140	492.00
IUUC-Bra-017755	Brassica rapa	43.86	0.00e+00	749.00
IUUC-Cel-018123	Caenorhabditis elegans	38.15	6.00e-51	195.00
IUUC-Cja-019705	Callithrix jacchus	43.35	7.00e-53	201.00
IUUC-Cfa-020440	Canis familiaris	43.35	6.00e-53	201.00
IUUC-Cpo-022091	Cavia porcellus	39.91	2.00e-51	196.00
IUUC-Cre-022872	Chlamydomonas reinhardtii	35.59	5.00e-09	55.50
IUUC-Csa-024202	Chlorocebus sabaeus	43.35	9.00e-53	201.00
IUUC-Cho-024410	Choloepus hoffmanni	42.31	5.00e-36	145.00
IUUC-Cin-025558	Ciona intestinalis	40.97	3.00e-53	202.00
IUUC-Cgl-026687	Colletotrichum gloeosporioides	39.75	4.00e-50	192.00
IUUC-Cne-027084	Cryptococcus neoformans	35.92	7.00e-40	158.00
IUUC-Cme-027148	Cyanidioschyzon merolae	27.32	3.00e-19	89.70
IUUC-Dre-028377	Danio rerio	42.86	1.00e-44	174.00
IUUC-Dno-029100	Dasypus novemcinctus	43.35	5.00e-53	201.00
IUUC-Dor-030310	Dipodomys ordii	43.10	2.00e-47	183.00
IUUC-Dse-031514	Dothistroma septosporum	39.02	2.00e-47	183.00
IUUC-Dme-031735	Drosophila melanogaster	42.67	2.00e-49	190.00
IUUC-Ete-033091	Echinops telfairi	38.20	1.00e-45	177.00
IUUC-Eca-033506	Equus caballus	43.35	9.00e-53	201.00
IUUC-Eeu-034506	Erinaceus europaeus	39.48	3.00e-45	176.00
IUUC-Fca-036033	Felis catus	43.35	7.00e-53	201.00
IUUC-Fal-037540	Ficedula albicollis	43.35	2.00e-53	203.00
IUUC-Fox-037944	Fusarium oxysporum	39.83	7.00e-53	201.00
IUUC-Fso-038172	Fusarium solani	38.11	3.00e-45	177.00
IUUC-Gmo-039211	Gadus morhua	41.63	4.00e-44	172.00
IUUC-Ggr-040096	Gaeumannomyces graminis	40.48	7.00e-53	202.00
IUUC-Gga-040487	Gallus gallus	43.35	2.00e-53	202.00
IUUC-Gac-042294	Gasterosteus aculeatus	41.20	3.00e-42	166.00
IUUC-Gma-043229	Glycine max	65.04	0.00e+00	1277.00
IUUC-Ggo-044950	Gorilla gorilla	41.71	5.00e-36	145.00
IUUC-Hsa-046666	Homo sapiens	43.35	1.00e-52	200.00
IUUC-Hvu-047405	Hordeum vulgare	62.30	3.00e-115	409.00
IUUC-Itr-047888	Ictidomys tridecemlineatus	43.35	3.00e-50	191.00
IUUC-Kpa-049260	Komagataella pastoris	35.22	8.00e-50	191.00
IUUC-Lch-050203	Latimeria chalumnae	43.35	4.00e-53	202.00
IUUC-Lpe-051195	Leersia perrieri	69.49	2.00e-108	386.00
IUUC-Loc-052886	Lepisosteus oculatus	42.86	3.00e-45	176.00
IUUC-Lma-053073	Leptosphaeria maculans	37.45	2.00e-44	174.00
IUUC-Laf-053490	Loxodonta africana	43.35	6.00e-53	201.00
IUUC-Mcc-055724	Macaca mulatta	43.35	1.00e-52	201.00
IUUC-Meu-056787	Macropus eugenii	43.55	3.00e-22	100.00
IUUC-Mor-056921	Magnaporthe oryzae	40.08	4.00e-50	192.00
IUUC-Mpo-057616	Magnaporthe poae	40.48	3.00e-52	199.00
IUUC-Mla-059146	Melampsora laricipopulina	36.99	2.00e-41	164.00
IUUC-Mga-059372	Meleagris gallopavo	43.35	3.00e-53	202.00
IUUC-Mvi-060479	Microbotryum violaceum	37.33	1.00e-32	135.00
IUUC-Mmr-061012	Microcebus murinus	43.35	7.00e-53	201.00
IUUC-Mdo-062330	Monodelphis domestica	43.35	4.00e-53	202.00
IUUC-Mmu-063894	Mus musculus	43.35	7.00e-53	201.00
IUUC-Mac-064805	Musa acuminata	69.04	1.00e-104	372.00
IUUC-Mpu-066894	Mustela putorius furo	43.35	6.00e-53	201.00
IUUC-Mlu-067321	Myotis lucifugus	43.35	9.00e-53	201.00
IUUC-Nfi-068451	Neosartorya fischeri	32.30	5.00e-45	176.00
IUUC-Ncr-068667	Neurospora crassa	35.51	7.00e-52	199.00
IUUC-Nle-070058	Nomascus leucogenys	42.92	2.00e-49	189.00
IUUC-Opr-071108	Ochotona princeps	43.40	2.00e-23	103.00
IUUC-Ont-071541	Oreochromis niloticus	41.63	1.00e-42	167.00
IUUC-Oan-073232	Ornithorhynchus anatinus	43.35	4.00e-53	202.00
IUUC-Ocu-074893	Oryctolagus cuniculus	43.35	9.00e-53	201.00
IUUC-Oba-075623	Oryza barthii	61.90	2.00e-59	222.00
IUUC-Obr-076653	Oryza brachyantha	60.36	1.00e-118	420.00
IUUC-Ogl-077946	Oryza glaberrima	66.03	9.00e-85	305.00
IUUC-Ogu-078775	Oryza glumaepatula	61.67	4.00e-107	380.00
IUUC-Oin-079214	Oryza indica	59.29	5.00e-117	415.00
IUUC-Olo-080799	Oryza longistaminata	50.45	7.00e-60	222.00
IUUC-Ome-081843	Oryza meridionalis	55.62	3.00e-113	402.00
IUUC-Oni-082944	Oryza nivara	61.90	3.00e-61	227.00
IUUC-Opu-083668	Oryza punctata	58.70	2.00e-116	413.00
IUUC-Oru-084249	Oryza rufipogon	44.28	5.00e-63	235.00
IUUC-Osa-086233	Oryza sativa	59.29	3.00e-117	416.00
IUUC-Ola-087121	Oryzias latipes	41.63	7.00e-43	168.00
IUUC-Olu-087772	Ostreococcus lucimarinus	42.59	1.00e-45	175.00
IUUC-Oga-088556	Otolemur garnettii	43.35	7.00e-53	201.00
IUUC-Oar-089768	Ovis aries	43.35	7.00e-53	201.00
IUUC-Ptr-090585	Pan troglodytes	43.35	1.00e-52	201.00
IUUC-Pan-092625	Papio anubis	43.35	9.00e-53	201.00
IUUC-Psi-093462	Pelodiscus sinensis	43.35	4.00e-53	202.00
IUUC-Pma-094468	Petromyzon marinus	39.02	5.00e-47	182.00
IUUC-Pno-094812	Phaeosphaeria nodorum	32.28	3.00e-21	97.80
IUUC-Ppa-095589	Physcomitrella patens	43.10	2.00e-12	65.90
IUUC-Pfo-096762	Poecilia formosa	41.63	2.00e-42	167.00
IUUC-Pab-097890	Pongo abelii	43.35	1.00e-52	201.00
IUUC-Pop-099764	Populus trichocarpa	54.43	0.00e+00	1015.00
IUUC-Pca-101121	Procavia capensis	42.86	6.00e-32	132.00
IUUC-Ppe-102076	Prunus persica	56.03	0.00e+00	1064.00
IUUC-Pva-102489	Pteropus vampyrus	43.35	4.00e-52	199.00
IUUC-Pgr-103568	Puccinia graminis	36.73	5.00e-39	155.00
IUUC-Ptt-103721	Puccinia triticina	33.12	6.00e-21	95.50
IUUC-Pte-104118	Pyrenophora teres	40.00	2.00e-49	190.00
IUUC-Pyt-104612	Pyrenophora triticirepentis	40.00	1.00e-49	190.00
IUUC-Rno-105627	Rattus norvegicus	43.35	1.00e-52	201.00
IUUC-Sce-106312	Saccharomyces cerevisiae	38.71	3.00e-48	186.00
IUUC-Sha-106619	Sarcophilus harrisii	43.35	4.00e-53	202.00
IUUC-Sja-107765	Schizosaccharomyces japonicus	40.66	2.00e-49	189.00
IUUC-Spo-108328	Schizosaccharomyces pombe	41.49	2.00e-50	192.00
IUUC-Ssl-108577	Sclerotinia sclerotiorum	39.51	7.00e-46	178.00
IUUC-Smo-108760	Selaginella moellendorffii	55.42	1.00e-80	291.00
IUUC-Sit-109923	Setaria italica	56.57	5.00e-111	395.00
IUUC-Sly-110900	Solanum lycopersicum	61.54	3.00e-111	395.00
IUUC-Stu-112226	Solanum tuberosum	65.28	2.00e-111	396.00
IUUC-Sar-113620	Sorex araneus	43.35	3.00e-51	196.00
IUUC-Sbi-114318	Sorghum bicolor	60.50	6.00e-115	408.00
IUUC-Sre-114956	Sporisorium reilianum	43.40	3.00e-54	206.00
IUUC-Ssc-116116	Sus scrofa	43.35	2.00e-50	191.00
IUUC-Tgu-117357	Taeniopygia guttata	43.35	2.00e-53	203.00
IUUC-Tru-118759	Takifugu rubripes	42.06	1.00e-43	170.00
IUUC-Tsy-119387	Tarsius syrichta	43.35	4.00e-52	199.00
IUUC-Tni-120536	Tetraodon nigroviridis	39.91	2.00e-43	169.00
IUUC-Tca-121035	Theobroma cacao	52.66	0.00e+00	779.00
IUUC-Tre-121996	Trichoderma reesei	37.30	2.00e-45	177.00
IUUC-Tvi-122371	Trichoderma virens	38.40	1.00e-50	195.00
IUUC-Tae-124373	Triticum aestivum	62.30	6.00e-115	407.00
IUUC-Tur-126324	Triticum urartu	62.30	7.00e-115	408.00
IUUC-Tme-127072	Tuber melanosporum	36.69	2.00e-39	157.00
IUUC-Tbe-128107	Tupaia belangeri	39.58	2.00e-49	189.00
IUUC-Ttr-128846	Tursiops truncatus	43.35	6.00e-52	198.00
IUUC-Uma-129607	Ustilago maydis	43.40	3.00e-54	206.00
IUUC-Vda-129971	Verticillium dahliae	36.07	6.00e-41	163.00
IUUC-Vpa-130298	Vicugna pacos	37.92	2.00e-42	166.00
IUUC-Vvi-131651	Vitis vinifera	56.09	0.00e+00	1094.00
IUUC-Xtr-132728	Xenopus tropicalis	43.35	1.00e-52	201.00
IUUC-Xma-133789	Xiphophorus maculatus	41.63	2.00e-42	167.00
IUUC-Yli-134461	Yarrowia lipolytica	34.49	2.00e-44	172.00
IUUC-Zma-135031	Zea mays	58.60	4.00e-115	408.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence