iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000001293.3	ENSXETT00000002771.2	ENSXETP00000002771.2
ENSXETG00000001293.3	ENSXETT00000060488.1	ENSXETP00000061017.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-07	31.3	356	382

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 11   f.sd.tllvsGsdDgtikvWDlrtgvl 35
           f +d   + s sdDg ++vWD+r+  +
   Q: 356  FsPDsSKVFSNSDDGFVYVWDVRSRQC 382
           677778899*************99777 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

MLSIEGNENE RKKTSHKKRR RDKSPEQEQN MKEEEELRTK HLKALADKPE TDTILEEFVF 60
GGEDEFVEKL IGHSKARHTV SGDLLESDSE EETSENAAPL ARKPAWVDEE DEHEENIEMT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGGTGCAGT AAGGGCTTTT TCGGATATAC AAGTTTAAGT ACACTCGAAA GGTACAAGGT 60
AAATTATCTT GCTGCGTCTC TTTCGCTAGA AACATGTATT TCCGGGTTGT AGAGGGCAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000184	Aegilops tauschii	37.68	4.00e-82	298.00
IUUC-Aml-002252	Ailuropoda melanoleuca	56.13	5.00e-151	527.00
IUUC-Atr-002575	Amborella trichopoda	38.37	2.00e-82	299.00
IUUC-Aly-006512	Arabidopsis lyrata	41.82	3.00e-76	278.00
IUUC-Ath-007244	Arabidopsis thaliana	42.42	3.00e-76	278.00
IUUC-Ago-007895	Ashbya gossypii	26.37	4.00e-34	139.00
IUUC-Acl-008343	Aspergillus clavatus	24.15	9.00e-29	121.00
IUUC-Afl-008445	Aspergillus flavus	24.12	2.00e-32	134.00
IUUC-Aor-009986	Aspergillus oryzae	24.56	2.00e-32	133.00
IUUC-Ame-011338	Astyanax mexicanus	54.81	8.00e-149	520.00
IUUC-Bgr-012201	Blumeria graminis	26.33	3.00e-32	133.00
IUUC-Bta-013058	Bos taurus	56.90	6.00e-150	523.00
IUUC-Bci-013619	Botrytis cinerea	25.21	6.00e-28	118.00
IUUC-Bdi-014771	Brachypodium distachyon	37.20	1.00e-78	286.00
IUUC-Bol-015230	Brassica oleracea	42.65	2.00e-76	279.00
IUUC-Bra-017041	Brassica rapa	39.80	1.00e-75	276.00
IUUC-Cel-018293	Caenorhabditis elegans	28.97	2.00e-53	202.00
IUUC-Cja-019503	Callithrix jacchus	57.49	2.00e-146	512.00
IUUC-Cfa-020743	Canis familiaris	56.55	3.00e-150	525.00
IUUC-Cpo-021488	Cavia porcellus	55.93	3.00e-142	498.00
IUUC-Cre-022926	Chlamydomonas reinhardtii	34.36	8.00e-62	231.00
IUUC-Csa-023110	Chlorocebus sabaeus	55.72	5.00e-149	520.00
IUUC-Cin-025208	Ciona intestinalis	40.18	3.00e-74	271.00
IUUC-Cme-027351	Cyanidioschyzon merolae	27.84	5.00e-43	168.00
IUUC-Dre-027524	Danio rerio	46.26	4.00e-120	424.00
IUUC-Dno-029243	Dasypus novemcinctus	55.72	5.00e-151	527.00
IUUC-Dor-030110	Dipodomys ordii	56.72	9.00e-139	486.00
IUUC-Dse-031217	Dothistroma septosporum	25.58	5.00e-20	92.40
IUUC-Dme-031999	Drosophila melanogaster	31.42	1.00e-50	193.00
IUUC-Eca-034350	Equus caballus	56.34	2.00e-149	521.00
IUUC-Eeu-034991	Erinaceus europaeus	55.09	6.00e-142	497.00
IUUC-Fal-036614	Ficedula albicollis	56.08	7.00e-152	530.00
IUUC-Gmo-039183	Gadus morhua	47.69	8.00e-129	453.00
IUUC-Gga-040922	Gallus gallus	58.52	9.00e-162	563.00
IUUC-Gac-041475	Gasterosteus aculeatus	56.29	4.00e-132	464.00
IUUC-Gma-042732	Glycine max	39.08	8.00e-82	297.00
IUUC-Ggo-044517	Gorilla gorilla	55.93	3.00e-150	525.00
IUUC-Hsa-045741	Homo sapiens	55.72	7.00e-150	523.00
IUUC-Hvu-047463	Hordeum vulgare	39.43	8.00e-34	135.00
IUUC-Itr-048128	Ictidomys tridecemlineatus	55.51	1.00e-148	519.00
IUUC-Kpa-049335	Komagataella pastoris	27.56	4.00e-43	169.00
IUUC-Lch-049816	Latimeria chalumnae	61.80	1.00e-167	582.00
IUUC-Lpe-051140	Leersia perrieri	37.12	2.00e-78	286.00
IUUC-Loc-051942	Lepisosteus oculatus	57.06	3.00e-161	561.00
IUUC-Laf-054245	Loxodonta africana	55.51	7.00e-150	523.00
IUUC-Meu-056300	Macropus eugenii	53.48	4.00e-118	417.00
IUUC-Mor-057184	Magnaporthe oryzae	27.18	2.00e-32	133.00
IUUC-Mtr-058019	Medicago truncatula	34.97	1.00e-75	277.00
IUUC-Mga-060179	Meleagris gallopavo	63.12	1.00e-156	545.00
IUUC-Mvi-060435	Microbotryum violaceum	31.88	3.00e-49	189.00
IUUC-Mdo-062187	Monodelphis domestica	49.90	2.00e-136	479.00
IUUC-Mmu-063386	Mus musculus	55.44	2.00e-148	518.00
IUUC-Mpu-066084	Mustela putorius furo	56.34	2.00e-150	525.00
IUUC-Mlu-068130	Myotis lucifugus	55.93	3.00e-149	521.00
IUUC-Nle-069743	Nomascus leucogenys	51.04	6.00e-129	454.00
IUUC-Opr-071111	Ochotona princeps	62.06	2.00e-130	459.00
IUUC-Ont-071979	Oreochromis niloticus	56.60	2.00e-142	498.00
IUUC-Ocu-073754	Oryctolagus cuniculus	54.58	5.00e-146	510.00
IUUC-Oba-075007	Oryza barthii	38.06	1.00e-81	296.00
IUUC-Obr-076447	Oryza brachyantha	38.00	5.00e-82	298.00
IUUC-Ogl-077733	Oryza glaberrima	38.24	9.00e-82	297.00
IUUC-Ogu-078828	Oryza glumaepatula	38.06	1.00e-81	296.00
IUUC-Oin-080152	Oryza indica	38.24	9.00e-82	297.00
IUUC-Olo-080983	Oryza longistaminata	37.53	8.00e-80	291.00
IUUC-Oni-082443	Oryza nivara	38.06	1.00e-81	296.00
IUUC-Opu-083771	Oryza punctata	38.23	3.00e-81	295.00
IUUC-Oru-084272	Oryza rufipogon	38.06	1.00e-81	297.00
IUUC-Osa-085885	Oryza sativa	38.24	7.00e-82	297.00
IUUC-Olu-087644	Ostreococcus lucimarinus	27.54	2.00e-26	112.00
IUUC-Oga-088834	Otolemur garnettii	55.51	2.00e-151	528.00
IUUC-Oar-089712	Ovis aries	59.48	2.00e-147	515.00
IUUC-Pan-092561	Papio anubis	56.13	6.00e-149	520.00
IUUC-Ppa-095397	Physcomitrella patens	41.80	4.00e-73	268.00
IUUC-Pfo-097068	Poecilia formosa	51.72	9.00e-140	490.00
IUUC-Pop-099471	Populus trichocarpa	38.39	8.00e-71	261.00
IUUC-Ppe-101446	Prunus persica	38.73	1.00e-78	286.00
IUUC-Pva-102851	Pteropus vampyrus	54.47	7.00e-143	500.00
IUUC-Pgr-103370	Puccinia graminis	28.31	1.00e-41	164.00
IUUC-Ptt-103838	Puccinia triticina	29.50	2.00e-37	150.00
IUUC-Rno-104910	Rattus norvegicus	53.97	2.00e-143	501.00
IUUC-Sce-106258	Saccharomyces cerevisiae	25.32	2.00e-33	137.00
IUUC-Sja-107746	Schizosaccharomyces japonicus	26.72	1.00e-45	177.00
IUUC-Spo-108268	Schizosaccharomyces pombe	28.17	1.00e-48	187.00
IUUC-Smo-108815	Selaginella moellendorffii	34.03	1.00e-74	273.00
IUUC-Sit-109706	Setaria italica	33.21	5.00e-80	291.00
IUUC-Sly-111533	Solanum lycopersicum	38.62	3.00e-83	302.00
IUUC-Stu-112853	Solanum tuberosum	38.62	2.00e-84	306.00
IUUC-Sbi-114747	Sorghum bicolor	37.20	9.00e-81	294.00
IUUC-Ssc-115916	Sus scrofa	56.49	6.00e-151	527.00
IUUC-Tgu-117291	Taeniopygia guttata	61.79	1.00e-146	513.00
IUUC-Tru-118724	Takifugu rubripes	47.66	1.00e-126	446.00
IUUC-Tsy-118928	Tarsius syrichta	50.71	8.00e-115	407.00
IUUC-Tca-121229	Theobroma cacao	39.68	6.00e-84	304.00
IUUC-Tae-123641	Triticum aestivum	37.62	3.00e-82	299.00
IUUC-Tur-126082	Triticum urartu	31.49	7.00e-48	184.00
IUUC-Ttr-128904	Tursiops truncatus	51.04	4.00e-129	454.00
IUUC-Vpa-130817	Vicugna pacos	56.96	1.00e-151	529.00
IUUC-Vvi-130982	Vitis vinifera	38.85	3.00e-77	282.00
IUUC-Xma-133391	Xiphophorus maculatus	50.47	4.00e-137	481.00
IUUC-Yli-134613	Yarrowia lipolytica	30.77	3.00e-50	192.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence