iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014366

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000882

Gene Name

LOC100835439; BRADI_3g35550

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI3G35550	BRADI3G35550.1	BRADI3G35550.1
BRADI3G35550	BRADI3G35550.2	BRADI3G35550.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.30e-12	45.6	314	346

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH d  ++ a+ +d ++l++Gs D t+++WD+r
   Q: 314  GHLDYSFSSAWhPDgNILATGSQDTTCRLWDIR 346
           89999*******999****************86 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MDEFELEDNL EFILQSIQEL IEDQGDNNPF GEVNQNELLA NLVNYDQDNM MPDVSAEDVV 60
NGKDVQGIPW EKMMFPRDKY RDMKMKSYKN YQNLSYARED ALQDCKQVQK DSPYYDFQYN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCGGCTGTCG GGGTTCCCTT CCCTCCCCCT TCCCCTGTTC CGCCTCCGCG TCGCGTCGCC 60
TCGCCGCCTT CCATTCCCGT TTAGAGCGCC CCCCTTTTTG GCCCGCGCCC CTCCCCCAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR003143--Cyt_cd1_C
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

bdi:100835439

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000214	Aegilops tauschii	90.30	4.00e-148	516.00
IUUC-Hvu-047437	Hordeum vulgare	88.01	5.00e-156	542.00
IUUC-Lpe-051685	Leersia perrieri	78.67	0.00e+00	712.00
IUUC-Mac-065012	Musa acuminata	57.54	1.00e-134	473.00
IUUC-Oba-075469	Oryza barthii	83.64	0.00e+00	772.00
IUUC-Obr-076922	Oryza brachyantha	84.68	0.00e+00	785.00
IUUC-Ogu-077978	Oryza glumaepatula	83.64	0.00e+00	772.00
IUUC-Oin-079628	Oryza indica	70.57	0.00e+00	630.00
IUUC-Olo-080502	Oryza longistaminata	83.64	0.00e+00	770.00
IUUC-Oni-082262	Oryza nivara	83.18	0.00e+00	768.00
IUUC-Opu-083138	Oryza punctata	83.22	0.00e+00	768.00
IUUC-Oru-084351	Oryza rufipogon	83.64	0.00e+00	772.00
IUUC-Osa-085692	Oryza sativa	84.83	0.00e+00	779.00
IUUC-Sja-107761	Schizosaccharomyces japonicus	33.07	5.00e-51	194.00
IUUC-Spo-108140	Schizosaccharomyces pombe	30.85	1.00e-41	162.00
IUUC-Sit-110785	Setaria italica	86.49	0.00e+00	809.00
IUUC-Sbi-114333	Sorghum bicolor	85.36	0.00e+00	812.00
IUUC-Tae-123077	Triticum aestivum	90.81	0.00e+00	860.00
IUUC-Tur-126142	Triticum urartu	89.30	1.00e-147	515.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence