iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016866

Ensembl Protein ID

Bra005544.1-P

UniProt Accession

M4CMV6; M4CMV6_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra005544	Bra005544.1	Bra005544.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/APC_C/CDC20	1.70e-124	416.0	116	417
E3 adaptor/Cullin RING/DCX/DWD	2.30e-24	85.4	251	281

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/APC_C/CDC20

   S: 2    ekvldapelrddfylnLldWssknvlavaLgssvylwsaktgdvskladl.eekdlvtsvswieegtllavGtkkgeveiyDveekkkvrtltg.h 95
            kvldap++ ddfylnLldW+s+nvla+aLg+++ylw+a+tg+vs++  + e++  +ts+sw ++g+++a+G ++++v+++D ++++k+rtl+g h
   Q: 116  SKVLDAPNMLDDFYLNLLDWGSRNVLAIALGHTLYLWDASTGSVSEFVTIeEDQGPITSISWAPDGSHVALGLDNSQVQLWDSSSNRKIRTLNGvH 211
           59***********************************************9667789************************************6549 PP
   S: 96   sarvgaLsWnaevlssGsrdgeilhrdvrvkelklstlqahaqevCGlkwnedaklLasGGnDnsvsvwdasssePlkkfkehkaavkaiawsPwq 191
            +rvg+L+Wn+++l++G+ dg+i+ +dvr++ + ++t+++h+ e+CGlkw+ ++ +LasGGnDn+v+vwd ss +P+++ +eh++avka+aw+P+q
   Q: 212  HSRVGSLAWNNHILTTGGMDGMIVNNDVRIRSHVVDTYRGHTGEICGLKWSGSGMQLASGGNDNVVHVWDRSSASPTHRLEEHTSAVKALAWCPFQ 307
           99********************************************************************************************** PP
   S: 192  kslLasGGGtaDrcikfwntltgalleeidtgsqvcsllwskkskelvsthGfaenkitlwkypslskvaelkgheaRvlslalspdgeaivtaag 287
           ++lLa+GGG  D  ikfwnt tga+l+++dtgsqvc llwsk+ +el+s+hGf++n+++lwkypsl k+ael+gh++Rvl+++ spdg ++++aag
   Q: 308  SNLLATGGGGIDGAIKFWNTHTGACLNSLDTGSQVCALLWSKNDRELLSSHGFSHNHLALWKYPSLVKMAELTGHTSRVLYMTQSPDGCTVASAAG 403
           ************************************************************************************************ PP
   S: 288  Detlrfwklfdkkk 301
           De+lrfw +f + +
   Q: 404  DESLRFWDVFGMPE 417
           **********8765 PP

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWD 29
           gHt+++++l++  s+  l+sG++D++++vWD
   Q: 251  GHTGEICGLKWsgSGMQLASGGNDNVVHVWD 281
           8**********865577************** PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MNAGMMNWKE HGRKIPKENL DRFIPNRSAM DFDFAHHALT EALIEARDGK KEEPLELSPS 60
KEAYRKRLAE TLGLNRTRIL AFRNKPQPPP HSHYYSHHQQ QQPLKPRRRR IPQSCSKVLD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAATGCAG GTATGATGAA CTGGAAGGAA CATGGTCGGA AGATTCCCAA GGAAAATCTG 60
GACAGATTCA TACCGAACAG ATCAGCTATG GATTTCGACT TTGCTCATCA CGCCCTCACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR033010--Cdc20/Fizzy
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0097027--F:ubiquitin-protein transferase activator activity
GO:1904668--P:positive regulation of ubiquitin protein ligase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-015089	Brassica oleracea	93.42	0.00e+00	807.00
IUUC-Dse-031391	Dothistroma septosporum	48.81	5.00e-97	348.00
IUUC-Lma-052998	Leptosphaeria maculans	47.61	8.00e-97	347.00
IUUC-Pno-094809	Phaeosphaeria nodorum	42.37	6.00e-97	347.00
IUUC-Pyt-104693	Pyrenophora triticirepentis	47.24	2.00e-96	346.00
IUUC-Sja-107919	Schizosaccharomyces japonicus	46.78	2.00e-95	342.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence