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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Sce-106242
Ensembl Protein ID YIR012W
UniProt Accession P35184; D6VVU2; SQT1_YEAST
Genbank Protein ID AAB69630.1; CAA86082.1; CAA53516.1; DAA08558.1
Protein Name Ribosome assembly protein SQT1
Genbank Nucleotide ID U75717; X79743; X75916; BK006942
Gene Name SQT1; YIR012W; YIB12W
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
YIR012W YIR012W YIR012W
Annotation
mRNA Expression
GEOFFGED
Protein-protein Interaction
IIDHINTMentha
Protein 3D Structure
PDBMMDB
Post-translational Modifications (PTMs)
CPLMBioGRID
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 6.10e-09 34.4 64 94
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           Htdsv+++   ++ +l+++G++D+  ++W  
   Q: 64   HTDSVFAIGHhPNlPLVCTGGGDNLAHLWTS 94
           ********548999***************65 PP
   
Organism Saccharomyces cerevisiae
Functional Description
(View)

Functional Description


     Present with 19700 molecules/cell in log phase SD medium.
 Present with 19700 molecules/cell in log phase SD medium.
Protein Sequence
(Fasta)
MEPQEEFITT EEVEQEIVPT VEVEQDVPVD IEGENDDDDE MMNDDEEALE VDMSNNSLTY 60
FDKHTDSVFA IGHHPNLPLV CTGGGDNLAH LWTSHSQPPK FAGTLTGYGE SVISCSFTSE 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Sce-106242|E3,WD_repeat|Saccharomyces cerevisiae
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGGAACCTC AAGAAGAGTT TATAACTACC GAAGAAGTTG AGCAGGAGAT TGTGCCCACT 60
GTGGAGGTCG AACAAGACGT TCCCGTTGAT ATTGAAGGAG AGAATGACGA CGATGATGAA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Sce-106242|E3,WD_repeat|Saccharomyces cerevisiae
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0002--3D-structure
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
SMART

SM00320--WD40
Gene Ontology

GO:0005829--C:cytosol
GO:0051082--F:unfolded protein binding
GO:0000027--P:ribosomal large subunit assembly
GO:0042273--P:ribosomal large subunit biogenesis
KEGG sce:YIR012W
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ago-007790 Ashbya gossypii 57.92 3.00e-129 452.00
IUUC-Acl-008079 Aspergillus clavatus 29.53 3.00e-17 81.30
IUUC-Afl-008588 Aspergillus flavus 28.51 3.00e-17 81.30
IUUC-Afu-009093 Aspergillus fumigatus 29.69 2.00e-17 82.00
IUUC-Ani-009179 Aspergillus nidulans 29.91 5.00e-20 90.10
IUUC-Aor-010024 Aspergillus oryzae 28.51 3.00e-17 81.30
IUUC-Ate-010448 Aspergillus terreus 28.51 8.00e-18 83.20
IUUC-Bgr-012118 Blumeria graminis 25.79 1.00e-24 105.00
IUUC-Bci-013724 Botrytis cinerea 27.01 2.00e-25 108.00
IUUC-Cel-018305 Caenorhabditis elegans 26.53 1.00e-05 42.40
IUUC-Cne-026911 Cryptococcus neoformans 24.26 2.00e-19 87.80
IUUC-Cme-027317 Cyanidioschyzon merolae 27.27 3.00e-05 40.80
IUUC-Dse-031205 Dothistroma septosporum 32.08 5.00e-23 100.00
IUUC-Dme-031587 Drosophila melanogaster 21.95 2.00e-17 81.30
IUUC-Fox-037970 Fusarium oxysporum 26.43 2.00e-14 72.00
IUUC-Fso-038432 Fusarium solani 26.67 1.00e-13 68.90
IUUC-Ggr-040066 Gaeumannomyces graminis 28.78 8.00e-22 96.30
IUUC-Kpa-049147 Komagataella pastoris 47.79 3.00e-97 346.00
IUUC-Lma-053153 Leptosphaeria maculans 33.63 1.00e-28 119.00
IUUC-Mor-056975 Magnaporthe oryzae 26.62 3.00e-17 80.90
IUUC-Mpo-057307 Magnaporthe poae 31.76 3.00e-07 46.20
IUUC-Mla-058856 Melampsora laricipopulina 24.80 2.00e-21 94.70
IUUC-Nfi-068543 Neosartorya fischeri 29.38 1.00e-17 82.40
IUUC-Ncr-068720 Neurospora crassa 30.38 6.00e-19 87.00
IUUC-Pno-095088 Phaeosphaeria nodorum 34.29 2.00e-28 119.00
IUUC-Pgr-103362 Puccinia graminis 24.22 5.00e-22 96.70
IUUC-Ptt-103756 Puccinia triticina 25.51 4.00e-16 77.00
IUUC-Pte-104401 Pyrenophora teres 35.44 6.00e-25 106.00
IUUC-Pyt-104510 Pyrenophora triticirepentis 35.44 2.00e-23 101.00
IUUC-Sja-107693 Schizosaccharomyces japonicus 26.10 2.00e-24 104.00
IUUC-Spo-108208 Schizosaccharomyces pombe 26.37 9.00e-26 108.00
IUUC-Sre-115029 Sporisorium reilianum 28.01 4.00e-26 110.00
IUUC-Tre-122058 Trichoderma reesei 24.68 9.00e-17 79.30
IUUC-Tvi-122350 Trichoderma virens 25.43 3.00e-19 87.80
IUUC-Tme-127079 Tuber melanosporum 32.41 1.00e-25 108.00
IUUC-Uma-129624 Ustilago maydis 27.56 1.00e-25 108.00
IUUC-Vda-129787 Verticillium dahliae 25.84 4.00e-20 90.50
IUUC-Yli-134520 Yarrowia lipolytica 39.53 1.00e-71 261.00
Created Date 25-Jun-2017

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