iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ogl-077134

UUCD1 version

UUC-OrG-02140

Ensembl Protein ID

ORGLA07G0103500.1

UniProt Accession

I1QA93; I1QA93_ORYGL

Protein Name

Ribosome biogenesis protein BOP1 homolog

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ORGLA07G0103500	ORGLA07G0103500.1	ORGLA07G0103500.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.90e-11	43.8	343	381

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gH+++v +l+   ++  ++sGs Dgti+vW++ tg+++k
   Q: 343  GHNGPVKSLSVeaTGQWIASGSSDGTIRVWEVETGRCIK 381
           8*********9976699********************87 PP

Organism

Oryza glaberrima

Functional Description
(View)

Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit.

Protein Sequence
(Fasta)

MGHSDGDHGS DLSADDSPWS EGSWSDDDDE GSLSFEDSGE GSDAESNEPD APAVEESDSS 60
EDEVAPRNTI GDVPLEWYKN EEHIGYDITG SKIKKRDREG RIEAYLRNAD DAKNWRKIYD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGCACA GCGACGGCGA CCACGGTAGC GACCTCTCCG CCGACGATTC CCCGTGGAGC 60
GAGGGGAGCT GGTCCGACGA CGATGACGAG GTGCGGCTCT CCTCTTCGAA GGATTTCGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08145--BOP1NT
PF00400--WD40

SMART

SM01035--BOP1NT
SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0005654--C:nucleoplasm
GO:0030687--C:preribosome, large subunit precursor
GO:0043021--F:ribonucleoprotein complex binding
GO:0000466--P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000463--P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001158	Aegilops tauschii	80.20	0.00e+00	946.00
IUUC-Aml-001507	Ailuropoda melanoleuca	41.64	3.00e-133	468.00
IUUC-Atr-003141	Amborella trichopoda	65.56	1.00e-161	561.00
IUUC-Apl-003545	Anas platyrhynchos	41.57	9.00e-127	446.00
IUUC-Aly-005649	Arabidopsis lyrata	64.65	0.00e+00	849.00
IUUC-Ath-007625	Arabidopsis thaliana	62.59	0.00e+00	825.00
IUUC-Ago-007958	Ashbya gossypii	39.70	5.00e-139	487.00
IUUC-Acl-008344	Aspergillus clavatus	41.60	8.00e-123	433.00
IUUC-Afl-008616	Aspergillus flavus	39.02	5.00e-123	434.00
IUUC-Afu-009083	Aspergillus fumigatus	41.23	7.00e-117	414.00
IUUC-Ani-009365	Aspergillus nidulans	40.12	1.00e-122	432.00
IUUC-Ang-009796	Aspergillus niger	40.09	2.00e-119	422.00
IUUC-Aor-010015	Aspergillus oryzae	39.02	6.00e-123	434.00
IUUC-Ate-010537	Aspergillus terreus	39.11	5.00e-127	447.00
IUUC-Ame-011767	Astyanax mexicanus	46.84	2.00e-68	251.00
IUUC-Bgr-012286	Blumeria graminis	41.53	9.00e-139	486.00
IUUC-Bta-013569	Bos taurus	44.82	8.00e-148	516.00
IUUC-Bci-013820	Botrytis cinerea	41.25	3.00e-130	458.00
IUUC-Bdi-014895	Brachypodium distachyon	83.72	0.00e+00	1124.00
IUUC-Bol-016099	Brassica oleracea	65.85	0.00e+00	871.00
IUUC-Bra-017174	Brassica rapa	65.75	0.00e+00	880.00
IUUC-Cel-018201	Caenorhabditis elegans	40.50	1.00e-127	449.00
IUUC-Cja-019009	Callithrix jacchus	40.00	1.00e-126	446.00
IUUC-Cfa-020173	Canis familiaris	42.02	5.00e-138	484.00
IUUC-Cpo-021796	Cavia porcellus	44.34	3.00e-145	508.00
IUUC-Cre-022650	Chlamydomonas reinhardtii	49.06	5.00e-171	593.00
IUUC-Csa-023440	Chlorocebus sabaeus	44.21	6.00e-151	527.00
IUUC-Cin-025782	Ciona intestinalis	45.16	2.00e-153	535.00
IUUC-Csv-026352	Ciona savignyi	42.83	2.00e-145	508.00
IUUC-Cgl-026393	Colletotrichum gloeosporioides	35.82	3.00e-105	375.00
IUUC-Cne-027004	Cryptococcus neoformans	43.92	3.00e-153	535.00
IUUC-Cme-027242	Cyanidioschyzon merolae	34.67	7.00e-106	377.00
IUUC-Dre-028658	Danio rerio	46.00	9.00e-163	566.00
IUUC-Dno-028883	Dasypus novemcinctus	44.75	1.00e-149	522.00
IUUC-Dor-031031	Dipodomys ordii	43.15	1.00e-148	519.00
IUUC-Dse-031443	Dothistroma septosporum	37.85	6.00e-122	430.00
IUUC-Dme-031786	Drosophila melanogaster	43.08	3.00e-154	538.00
IUUC-Eca-033677	Equus caballus	44.59	1.00e-146	513.00
IUUC-Eeu-035310	Erinaceus europaeus	40.48	1.00e-110	392.00
IUUC-Fca-035888	Felis catus	42.81	2.00e-141	495.00
IUUC-Fal-037438	Ficedula albicollis	46.46	3.00e-133	467.00
IUUC-Fox-037973	Fusarium oxysporum	41.35	5.00e-142	497.00
IUUC-Fso-038187	Fusarium solani	40.59	5.00e-139	487.00
IUUC-Gmo-039114	Gadus morhua	42.65	2.00e-138	484.00
IUUC-Ggr-039746	Gaeumannomyces graminis	40.34	5.00e-144	504.00
IUUC-Gga-040631	Gallus gallus	49.56	4.00e-95	340.00
IUUC-Gac-042582	Gasterosteus aculeatus	44.11	4.00e-145	507.00
IUUC-Gma-044215	Glycine max	63.99	0.00e+00	858.00
IUUC-Ggo-045587	Gorilla gorilla	44.37	9.00e-151	526.00
IUUC-Hsa-046319	Homo sapiens	44.37	6.00e-151	527.00
IUUC-Hvu-047526	Hordeum vulgare	83.09	0.00e+00	1075.00
IUUC-Itr-048683	Ictidomys tridecemlineatus	44.82	5.00e-148	517.00
IUUC-Kpa-049221	Komagataella pastoris	39.10	9.00e-130	456.00
IUUC-Lch-049640	Latimeria chalumnae	45.40	7.00e-166	576.00
IUUC-Lpe-051135	Leersia perrieri	90.85	0.00e+00	1078.00
IUUC-Loc-051930	Lepisosteus oculatus	46.76	2.00e-163	568.00
IUUC-Lma-053290	Leptosphaeria maculans	41.63	1.00e-128	452.00
IUUC-Laf-053903	Loxodonta africana	42.44	3.00e-130	458.00
IUUC-Mcc-055471	Macaca mulatta	44.37	5.00e-152	530.00
IUUC-Meu-056190	Macropus eugenii	44.61	3.00e-149	521.00
IUUC-Mor-057135	Magnaporthe oryzae	39.97	2.00e-136	479.00
IUUC-Mpo-057475	Magnaporthe poae	39.15	4.00e-134	471.00
IUUC-Mtr-058689	Medicago truncatula	61.35	0.00e+00	808.00
IUUC-Mla-059149	Melampsora laricipopulina	42.39	4.00e-143	501.00
IUUC-Mga-059645	Meleagris gallopavo	45.16	7.00e-58	216.00
IUUC-Mvi-060485	Microbotryum violaceum	41.34	3.00e-134	472.00
IUUC-Mmr-061674	Microcebus murinus	44.50	5.00e-147	513.00
IUUC-Mdo-062973	Monodelphis domestica	43.31	8.00e-154	536.00
IUUC-Mmu-064180	Mus musculus	42.82	4.00e-151	527.00
IUUC-Mac-064535	Musa acuminata	66.13	0.00e+00	664.00
IUUC-Mpu-066406	Mustela putorius furo	44.43	3.00e-152	531.00
IUUC-Mlu-067795	Myotis lucifugus	43.07	2.00e-139	488.00
IUUC-Nfi-068516	Neosartorya fischeri	39.36	4.00e-111	394.00
IUUC-Ncr-068767	Neurospora crassa	41.23	5.00e-130	457.00
IUUC-Opr-071084	Ochotona princeps	45.58	9.00e-64	236.00
IUUC-Ont-071614	Oreochromis niloticus	43.71	1.00e-154	539.00
IUUC-Oba-075980	Oryza barthii	94.10	0.00e+00	1147.00
IUUC-Obr-076799	Oryza brachyantha	96.76	0.00e+00	1241.00
IUUC-Ogu-078655	Oryza glumaepatula	95.72	0.00e+00	1190.00
IUUC-Oin-079654	Oryza indica	99.71	0.00e+00	1201.00
IUUC-Olo-080706	Oryza longistaminata	94.69	0.00e+00	1156.00
IUUC-Ome-081716	Oryza meridionalis	79.32	0.00e+00	919.00
IUUC-Oni-082508	Oryza nivara	93.37	0.00e+00	1150.00
IUUC-Opu-083707	Oryza punctata	93.51	0.00e+00	1129.00
IUUC-Oru-084453	Oryza rufipogon	94.69	0.00e+00	1156.00
IUUC-Osa-085811	Oryza sativa	99.71	0.00e+00	1230.00
IUUC-Ola-087361	Oryzias latipes	45.96	6.00e-159	553.00
IUUC-Oga-088015	Otolemur garnettii	44.01	4.00e-153	534.00
IUUC-Oar-090058	Ovis aries	48.45	4.00e-45	175.00
IUUC-Ptr-090631	Pan troglodytes	42.35	6.00e-55	207.00
IUUC-Pan-092306	Papio anubis	44.30	1.00e-150	525.00
IUUC-Pma-094622	Petromyzon marinus	45.50	2.00e-161	561.00
IUUC-Pno-094794	Phaeosphaeria nodorum	38.18	2.00e-117	416.00
IUUC-Ppa-095528	Physcomitrella patens	54.41	3.00e-152	531.00
IUUC-Pfo-096682	Poecilia formosa	44.25	3.00e-156	544.00
IUUC-Pab-097939	Pongo abelii	44.72	1.00e-138	485.00
IUUC-Pop-099043	Populus trichocarpa	70.34	0.00e+00	821.00
IUUC-Pca-100333	Procavia capensis	43.64	2.00e-147	515.00
IUUC-Ppe-102078	Prunus persica	64.67	0.00e+00	820.00
IUUC-Pgr-103525	Puccinia graminis	43.89	3.00e-136	478.00
IUUC-Ptt-103929	Puccinia triticina	43.22	7.00e-131	460.00
IUUC-Pte-104029	Pyrenophora teres	41.54	7.00e-139	486.00
IUUC-Pyt-104446	Pyrenophora triticirepentis	41.54	2.00e-138	485.00
IUUC-Rno-105248	Rattus norvegicus	45.15	1.00e-148	519.00
IUUC-Sce-106381	Saccharomyces cerevisiae	39.51	1.00e-137	483.00
IUUC-Sha-106519	Sarcophilus harrisii	46.13	9.00e-155	539.00
IUUC-Sja-107908	Schizosaccharomyces japonicus	40.47	3.00e-128	451.00
IUUC-Spo-108071	Schizosaccharomyces pombe	39.94	3.00e-128	451.00
IUUC-Smo-109604	Selaginella moellendorffii	59.46	0.00e+00	752.00
IUUC-Sit-109742	Setaria italica	87.37	0.00e+00	1163.00
IUUC-Sly-110970	Solanum lycopersicum	73.18	4.00e-150	523.00
IUUC-Stu-112593	Solanum tuberosum	66.81	0.00e+00	896.00
IUUC-Sar-113123	Sorex araneus	42.45	2.00e-62	231.00
IUUC-Sbi-113945	Sorghum bicolor	86.93	0.00e+00	1129.00
IUUC-Sre-115188	Sporisorium reilianum	40.53	1.00e-132	466.00
IUUC-Ssc-115352	Sus scrofa	44.01	2.00e-151	528.00
IUUC-Tru-117685	Takifugu rubripes	44.98	3.00e-156	544.00
IUUC-Tni-119982	Tetraodon nigroviridis	43.87	3.00e-149	521.00
IUUC-Tca-121664	Theobroma cacao	69.12	0.00e+00	907.00
IUUC-Tre-122229	Trichoderma reesei	41.67	1.00e-126	446.00
IUUC-Tvi-122576	Trichoderma virens	41.74	1.00e-129	456.00
IUUC-Tae-124110	Triticum aestivum	86.67	0.00e+00	1024.00
IUUC-Tur-126781	Triticum urartu	80.54	0.00e+00	934.00
IUUC-Tme-127080	Tuber melanosporum	44.01	5.00e-153	533.00
IUUC-Ttr-128514	Tursiops truncatus	42.14	9.00e-93	333.00
IUUC-Uma-129556	Ustilago maydis	40.85	5.00e-131	461.00
IUUC-Vda-129715	Verticillium dahliae	42.18	8.00e-137	480.00
IUUC-Vvi-131211	Vitis vinifera	63.94	0.00e+00	868.00
IUUC-Xma-133883	Xiphophorus maculatus	44.18	4.00e-151	527.00
IUUC-Yli-134438	Yarrowia lipolytica	40.87	5.00e-131	461.00
IUUC-Zma-135341	Zea mays	77.54	0.00e+00	1065.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence