iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cgl-026618

Ensembl Protein ID

ELA37258

UniProt Accession

L2GGV5; L2GGV5_COLGN

Genbank Protein ID

ELA37258.1

Protein Name

Ribosomal assembly complex component

Genbank Nucleotide ID

KB020484

Gene Name

CGGC5_3345

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CGGC5_3345	ELA37258	ELA37258

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-15	56.4	174	216

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.....sd.tllvsGsdDgtikvWDlrtgvllks 38
           H + +t+la      ++  + vs+s D+t+ +W++ tg++l++
   Q: 174  HRAAITSLAIsrsvnPEtSICVSASKDKTCIIWNYQTGDVLRT 216
           9999*********98775566*****************99875 PP

Organism

Colletotrichum gloeosporioides

Protein Sequence
(Fasta)

MLSEEFYSCI CGPPIAANTA VSKDVGIYAH SLSPSYSVKS TLKKSNTPAN CLAVSDAHVF 60
AAQHEKSQLH VYSRARGIQE AVITFPEKIR SLALIDDVLA LGTAEGRLIL WETCTGRQLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTGTCAG AGGAATTCTA CTCCTGCATC TGCGGTCCGC CTATAGCGGC AAACACCGCC 60
GTCTCCAAGG ATGTTGGCAT CTACGCCCAC TCGCTCAGCC CCAGCTATTC TGTCAAGTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001040	Aegilops tauschii	29.17	2.00e-18	85.10
IUUC-Atr-002688	Amborella trichopoda	28.57	2.00e-19	89.00
IUUC-Aly-006061	Arabidopsis lyrata	25.45	6.00e-21	93.60
IUUC-Ath-007111	Arabidopsis thaliana	26.05	3.00e-20	91.30
IUUC-Acl-008357	Aspergillus clavatus	42.94	9.00e-73	265.00
IUUC-Afl-008564	Aspergillus flavus	45.58	2.00e-76	278.00
IUUC-Afu-009113	Aspergillus fumigatus	42.86	3.00e-73	267.00
IUUC-Ani-009132	Aspergillus nidulans	39.89	4.00e-70	256.00
IUUC-Ang-009586	Aspergillus niger	42.41	8.00e-72	262.00
IUUC-Aor-009882	Aspergillus oryzae	45.58	2.00e-75	275.00
IUUC-Ate-010249	Aspergillus terreus	41.23	6.00e-68	249.00
IUUC-Ame-010912	Astyanax mexicanus	25.85	2.00e-19	88.20
IUUC-Bgr-012242	Blumeria graminis	35.78	1.00e-74	271.00
IUUC-Bci-013791	Botrytis cinerea	47.40	7.00e-106	375.00
IUUC-Bdi-015054	Brachypodium distachyon	28.77	5.00e-22	97.10
IUUC-Bol-016342	Brassica oleracea	27.73	8.00e-20	89.70
IUUC-Bra-016967	Brassica rapa	27.73	8.00e-20	89.70
IUUC-Cpo-021438	Cavia porcellus	26.98	6.00e-18	83.20
IUUC-Csv-025918	Ciona savignyi	24.54	1.00e-14	72.40
IUUC-Cne-026843	Cryptococcus neoformans	26.57	1.00e-17	82.40
IUUC-Dre-027560	Danio rerio	27.17	5.00e-22	97.10
IUUC-Dse-031492	Dothistroma septosporum	38.19	6.00e-65	239.00
IUUC-Dme-032059	Drosophila melanogaster	28.01	1.00e-19	89.40
IUUC-Fox-037903	Fusarium oxysporum	60.51	3.00e-158	549.00
IUUC-Fso-038214	Fusarium solani	50.00	2.00e-111	393.00
IUUC-Gmo-039323	Gadus morhua	32.35	9.00e-15	72.80
IUUC-Ggr-040050	Gaeumannomyces graminis	54.88	2.00e-106	377.00
IUUC-Gac-042641	Gasterosteus aculeatus	27.04	1.00e-16	79.00
IUUC-Gma-044265	Glycine max	29.41	3.00e-23	100.00
IUUC-Hvu-047685	Hordeum vulgare	29.96	2.00e-19	88.60
IUUC-Itr-048032	Ictidomys tridecemlineatus	26.32	1.00e-16	79.00
IUUC-Kpa-049129	Komagataella pastoris	25.44	2.00e-21	95.10
IUUC-Lch-049532	Latimeria chalumnae	26.03	1.00e-20	92.40
IUUC-Lpe-051321	Leersia perrieri	30.17	2.00e-21	95.10
IUUC-Lma-053091	Leptosphaeria maculans	38.57	8.00e-64	236.00
IUUC-Meu-056090	Macropus eugenii	27.54	9.00e-18	82.80
IUUC-Mor-057160	Magnaporthe oryzae	53.68	1.00e-139	487.00
IUUC-Mtr-058800	Medicago truncatula	28.87	1.00e-20	92.00
IUUC-Mla-058943	Melampsora laricipopulina	34.25	2.00e-15	75.50
IUUC-Mvi-060315	Microbotryum violaceum	40.27	5.00e-20	90.90
IUUC-Mdo-062350	Monodelphis domestica	27.17	4.00e-17	80.50
IUUC-Mmu-063706	Mus musculus	26.53	2.00e-15	74.70
IUUC-Mac-064646	Musa acuminata	28.57	7.00e-07	46.60
IUUC-Mpu-066711	Mustela putorius furo	27.68	2.00e-17	81.60
IUUC-Nfi-068454	Neosartorya fischeri	43.14	3.00e-73	267.00
IUUC-Ncr-068914	Neurospora crassa	55.37	8.00e-133	464.00
IUUC-Ont-071435	Oreochromis niloticus	25.88	1.00e-18	85.90
IUUC-Oba-075873	Oryza barthii	30.80	5.00e-23	100.00
IUUC-Ogl-077840	Oryza glaberrima	30.80	4.00e-23	100.00
IUUC-Ogu-077988	Oryza glumaepatula	30.80	5.00e-23	100.00
IUUC-Oin-079237	Oryza indica	28.57	4.00e-18	84.00
IUUC-Olo-080415	Oryza longistaminata	29.49	2.00e-22	99.40
IUUC-Ome-081952	Oryza meridionalis	30.38	2.00e-22	98.60
IUUC-Oni-082300	Oryza nivara	30.80	5.00e-23	100.00
IUUC-Opu-083436	Oryza punctata	28.26	6.00e-17	80.50
IUUC-Oru-085164	Oryza rufipogon	29.54	1.00e-23	102.00
IUUC-Osa-086129	Oryza sativa	30.80	7.00e-23	99.80
IUUC-Ola-086571	Oryzias latipes	28.26	2.00e-17	81.60
IUUC-Pno-095047	Phaeosphaeria nodorum	39.65	3.00e-55	207.00
IUUC-Ppa-095317	Physcomitrella patens	29.05	1.00e-15	75.90
IUUC-Pfo-096996	Poecilia formosa	28.30	4.00e-15	74.30
IUUC-Pop-099609	Populus trichocarpa	28.15	5.00e-20	90.50
IUUC-Ppe-101904	Prunus persica	27.73	2.00e-19	88.20
IUUC-Pgr-103616	Puccinia graminis	31.51	3.00e-13	68.20
IUUC-Ptt-103954	Puccinia triticina	32.05	3.00e-14	71.60
IUUC-Pte-104120	Pyrenophora teres	33.13	7.00e-67	246.00
IUUC-Pyt-104558	Pyrenophora triticirepentis	33.47	6.00e-67	246.00
IUUC-Sce-106403	Saccharomyces cerevisiae	22.46	1.00e-09	55.80
IUUC-Sha-107636	Sarcophilus harrisii	28.26	1.00e-18	85.90
IUUC-Sja-107783	Schizosaccharomyces japonicus	26.13	3.00e-22	97.80
IUUC-Spo-108192	Schizosaccharomyces pombe	25.00	3.00e-21	94.40
IUUC-Ssl-108384	Sclerotinia sclerotiorum	45.74	1.00e-106	378.00
IUUC-Smo-109498	Selaginella moellendorffii	30.77	1.00e-18	85.90
IUUC-Sit-110770	Setaria italica	29.80	8.00e-25	106.00
IUUC-Sly-111453	Solanum lycopersicum	26.96	2.00e-22	98.20
IUUC-Stu-112384	Solanum tuberosum	26.96	3.00e-22	98.60
IUUC-Sbi-113952	Sorghum bicolor	30.80	1.00e-25	108.00
IUUC-Sre-115223	Sporisorium reilianum	30.34	8.00e-20	90.10
IUUC-Tru-117629	Takifugu rubripes	27.27	3.00e-16	77.80
IUUC-Tca-121766	Theobroma cacao	26.75	2.00e-20	91.70
IUUC-Tre-122047	Trichoderma reesei	67.88	2.00e-167	580.00
IUUC-Tvi-122668	Trichoderma virens	65.90	6.00e-166	575.00
IUUC-Tae-125258	Triticum aestivum	30.90	8.00e-18	82.80
IUUC-Tur-126673	Triticum urartu	28.12	3.00e-12	64.70
IUUC-Tme-127070	Tuber melanosporum	31.79	7.00e-44	169.00
IUUC-Uma-129521	Ustilago maydis	29.49	1.00e-19	89.40
IUUC-Vvi-130872	Vitis vinifera	28.57	3.00e-21	94.40
IUUC-Xtr-131838	Xenopus tropicalis	27.84	4.00e-14	70.50
IUUC-Xma-134106	Xiphophorus maculatus	28.68	1.00e-15	75.50
IUUC-Yli-134551	Yarrowia lipolytica	24.00	8.00e-14	69.70
IUUC-Zma-134703	Zea mays	27.79	2.00e-24	105.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence