iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppe-101904

Ensembl Protein ID

EMJ23367

UniProt Accession

M5XB85; M5XB85_PRUPE

Genbank Protein ID

EMJ23367.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KB638913

Gene Name

RID3; PRUPE_ppa005814mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PRUPE_ppa005814mg	EMJ23367	EMJ23367

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.00e-24	84.6	265	299

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtgv 34
           H++ vtcl +  s++ l+sGs Dg+++vWD ++++
   Q: 265  HSNTVTCLVYsiSGNCLISGSEDGVVRVWDAKSHN 299
           99******99998899**************87766 PP

Organism

Prunus persica

Protein Sequence
(Fasta)

MDVVVASSSI EAGIGCWDLH TGAEQLRYKL CASPPHGLVC VGQRFLASSQ LREPSASGSV 60
QYWSWSKPQV DVKSFPAEQI KPLAANSEGT YIVGGGLSGN IYLWEVASGR LLKKWHAHYR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATGTAG TGGTGGCTTC GTCGTCGATC GAAGCAGGCA TTGGCTGCTG GGACCTACAC 60
ACCGGCGCCG AGCAGCTCCG CTACAAGCTC TGCGCCTCTC CGCCTCACGG CCTTGTCTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR027295--Quinoprotein_ADH-like_fam
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

pper:PRUPE_ppa005814mg

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001040	Aegilops tauschii	49.31	8.00e-75	273.00
IUUC-Aml-001819	Ailuropoda melanoleuca	33.43	2.00e-36	145.00
IUUC-Atr-002688	Amborella trichopoda	51.31	2.00e-113	401.00
IUUC-Apl-004023	Anas platyrhynchos	29.88	8.00e-21	93.60
IUUC-Aca-004879	Anolis carolinensis	36.36	2.00e-11	60.50
IUUC-Aly-006061	Arabidopsis lyrata	57.24	1.00e-146	511.00
IUUC-Ath-007111	Arabidopsis thaliana	55.86	2.00e-144	504.00
IUUC-Acl-008357	Aspergillus clavatus	26.24	2.00e-21	96.70
IUUC-Afl-008564	Aspergillus flavus	26.55	2.00e-20	93.20
IUUC-Afu-009113	Aspergillus fumigatus	27.94	1.00e-22	100.00
IUUC-Ani-009132	Aspergillus nidulans	29.41	6.00e-24	104.00
IUUC-Ang-009586	Aspergillus niger	26.02	2.00e-21	95.90
IUUC-Aor-009882	Aspergillus oryzae	26.55	1.00e-20	94.00
IUUC-Ate-010249	Aspergillus terreus	26.40	1.00e-18	87.40
IUUC-Ame-010912	Astyanax mexicanus	33.54	2.00e-41	162.00
IUUC-Bta-013402	Bos taurus	34.00	9.00e-41	160.00
IUUC-Bci-013791	Botrytis cinerea	25.54	4.00e-18	84.70
IUUC-Bdi-015054	Brachypodium distachyon	42.42	2.00e-91	328.00
IUUC-Bol-016342	Brassica oleracea	57.55	2.00e-124	438.00
IUUC-Bra-016967	Brassica rapa	58.03	3.00e-125	441.00
IUUC-Cja-019758	Callithrix jacchus	32.43	7.00e-39	153.00
IUUC-Cfa-020495	Canis familiaris	35.91	3.00e-32	131.00
IUUC-Cpo-021438	Cavia porcellus	35.08	6.00e-40	157.00
IUUC-Csa-023416	Chlorocebus sabaeus	33.14	2.00e-39	155.00
IUUC-Csv-025918	Ciona savignyi	31.25	9.00e-26	110.00
IUUC-Cgl-026618	Colletotrichum gloeosporioides	27.73	3.00e-19	88.60
IUUC-Cne-026843	Cryptococcus neoformans	30.51	9.00e-20	90.50
IUUC-Dre-027560	Danio rerio	32.21	4.00e-42	164.00
IUUC-Dno-029315	Dasypus novemcinctus	33.93	9.00e-47	180.00
IUUC-Dor-030935	Dipodomys ordii	33.43	3.00e-44	171.00
IUUC-Dse-031492	Dothistroma septosporum	27.06	1.00e-21	97.40
IUUC-Dme-032059	Drosophila melanogaster	31.50	1.00e-38	152.00
IUUC-Fca-036068	Felis catus	33.43	1.00e-35	143.00
IUUC-Fal-037467	Ficedula albicollis	35.98	5.00e-40	157.00
IUUC-Fox-037903	Fusarium oxysporum	29.61	3.00e-22	98.60
IUUC-Gmo-039323	Gadus morhua	30.46	5.00e-32	130.00
IUUC-Ggr-040050	Gaeumannomyces graminis	25.93	1.00e-07	50.40
IUUC-Gga-040563	Gallus gallus	34.25	3.00e-34	138.00
IUUC-Gac-042641	Gasterosteus aculeatus	32.73	8.00e-40	156.00
IUUC-Gma-043856	Glycine max	66.29	1.00e-173	602.00
IUUC-Ggo-045137	Gorilla gorilla	33.33	1.00e-34	139.00
IUUC-Hsa-046335	Homo sapiens	33.63	4.00e-35	141.00
IUUC-Hvu-047685	Hordeum vulgare	42.20	3.00e-85	308.00
IUUC-Itr-048032	Ictidomys tridecemlineatus	29.61	2.00e-44	172.00
IUUC-Kpa-049129	Komagataella pastoris	27.17	3.00e-29	122.00
IUUC-Lch-049532	Latimeria chalumnae	35.13	8.00e-46	176.00
IUUC-Lpe-051321	Leersia perrieri	41.11	1.00e-76	279.00
IUUC-Loc-052471	Lepisosteus oculatus	29.76	9.00e-33	133.00
IUUC-Lma-053091	Leptosphaeria maculans	26.43	1.00e-21	97.10
IUUC-Laf-054331	Loxodonta africana	33.74	3.00e-37	148.00
IUUC-Mcc-055803	Macaca mulatta	33.14	2.00e-39	155.00
IUUC-Meu-056090	Macropus eugenii	33.33	4.00e-42	164.00
IUUC-Mor-057160	Magnaporthe oryzae	25.36	2.00e-17	82.40
IUUC-Mtr-058800	Medicago truncatula	63.88	3.00e-167	580.00
IUUC-Mla-058943	Melampsora laricipopulina	30.77	2.00e-21	96.30
IUUC-Mga-059282	Meleagris gallopavo	35.89	1.00e-37	149.00
IUUC-Mvi-060315	Microbotryum violaceum	38.33	2.00e-29	123.00
IUUC-Mmr-061127	Microcebus murinus	34.34	2.00e-41	162.00
IUUC-Mdo-062350	Monodelphis domestica	31.34	6.00e-42	164.00
IUUC-Mmu-063706	Mus musculus	33.33	3.00e-42	165.00
IUUC-Mac-065066	Musa acuminata	63.86	2.00e-76	277.00
IUUC-Mpu-066711	Mustela putorius furo	33.43	7.00e-44	170.00
IUUC-Mlu-068121	Myotis lucifugus	35.18	9.00e-36	143.00
IUUC-Nfi-068454	Neosartorya fischeri	27.94	2.00e-22	99.40
IUUC-Ncr-068914	Neurospora crassa	26.74	2.00e-19	89.40
IUUC-Nle-069518	Nomascus leucogenys	32.58	3.00e-33	135.00
IUUC-Ont-071435	Oreochromis niloticus	34.05	2.00e-39	155.00
IUUC-Oba-075873	Oryza barthii	51.06	5.00e-94	337.00
IUUC-Ogl-077840	Oryza glaberrima	44.52	2.00e-96	345.00
IUUC-Ogu-077988	Oryza glumaepatula	51.06	5.00e-94	337.00
IUUC-Oin-079237	Oryza indica	42.81	2.00e-61	228.00
IUUC-Olo-080415	Oryza longistaminata	42.19	8.00e-85	307.00
IUUC-Ome-081952	Oryza meridionalis	51.06	5.00e-93	333.00
IUUC-Oni-082300	Oryza nivara	51.06	5.00e-94	337.00
IUUC-Opu-083436	Oryza punctata	50.45	9.00e-59	220.00
IUUC-Oru-085164	Oryza rufipogon	51.36	2.00e-94	338.00
IUUC-Osa-086129	Oryza sativa	44.78	3.00e-94	337.00
IUUC-Ola-086571	Oryzias latipes	33.73	4.00e-38	151.00
IUUC-Oga-088561	Otolemur garnettii	32.11	3.00e-42	165.00
IUUC-Oar-090131	Ovis aries	33.94	5.00e-32	130.00
IUUC-Ptr-091301	Pan troglodytes	27.19	2.00e-20	92.00
IUUC-Pan-092810	Papio anubis	33.14	1.00e-39	156.00
IUUC-Psi-093091	Pelodiscus sinensis	33.20	3.00e-31	128.00
IUUC-Ppa-095317	Physcomitrella patens	42.82	2.00e-69	255.00
IUUC-Pfo-096996	Poecilia formosa	32.11	2.00e-39	155.00
IUUC-Pab-097747	Pongo abelii	32.80	1.00e-36	146.00
IUUC-Pop-099609	Populus trichocarpa	67.57	4.00e-180	623.00
IUUC-Pca-100972	Procavia capensis	34.78	3.00e-33	134.00
IUUC-Pva-102700	Pteropus vampyrus	34.67	3.00e-23	102.00
IUUC-Pgr-103616	Puccinia graminis	32.93	6.00e-21	94.70
IUUC-Ptt-103954	Puccinia triticina	29.33	1.00e-21	97.40
IUUC-Pte-104120	Pyrenophora teres	26.05	5.00e-22	98.60
IUUC-Pyt-104558	Pyrenophora triticirepentis	26.45	9.00e-22	97.40
IUUC-Rno-104933	Rattus norvegicus	33.63	3.00e-43	168.00
IUUC-Sha-107636	Sarcophilus harrisii	33.86	2.00e-43	169.00
IUUC-Sja-107783	Schizosaccharomyces japonicus	26.09	6.00e-31	127.00
IUUC-Spo-108192	Schizosaccharomyces pombe	25.52	9.00e-27	113.00
IUUC-Ssl-108384	Sclerotinia sclerotiorum	25.65	4.00e-19	88.60
IUUC-Smo-109498	Selaginella moellendorffii	42.48	3.00e-89	321.00
IUUC-Sit-110770	Setaria italica	44.39	7.00e-92	330.00
IUUC-Sly-111453	Solanum lycopersicum	64.25	7.00e-170	588.00
IUUC-Stu-112384	Solanum tuberosum	65.78	6.00e-149	520.00
IUUC-Sbi-113952	Sorghum bicolor	42.76	3.00e-90	324.00
IUUC-Ssc-115627	Sus scrofa	32.84	1.00e-38	153.00
IUUC-Tgu-117404	Taeniopygia guttata	37.10	4.00e-40	157.00
IUUC-Tru-117629	Takifugu rubripes	32.72	3.00e-37	148.00
IUUC-Tni-119839	Tetraodon nigroviridis	30.62	4.00e-30	124.00
IUUC-Tca-121766	Theobroma cacao	71.21	0.00e+00	649.00
IUUC-Tre-122047	Trichoderma reesei	25.28	5.00e-20	91.30
IUUC-Tvi-122668	Trichoderma virens	25.20	1.00e-20	93.20
IUUC-Tae-125742	Triticum aestivum	42.17	7.00e-87	313.00
IUUC-Tur-126673	Triticum urartu	39.36	1.00e-73	269.00
IUUC-Tme-127070	Tuber melanosporum	26.73	2.00e-27	116.00
IUUC-Tbe-127452	Tupaia belangeri	33.57	6.00e-16	77.80
IUUC-Ttr-128735	Tursiops truncatus	30.86	4.00e-34	138.00
IUUC-Vvi-130872	Vitis vinifera	67.12	4.00e-171	593.00
IUUC-Xtr-131838	Xenopus tropicalis	38.56	2.00e-39	155.00
IUUC-Xma-134106	Xiphophorus maculatus	31.88	5.00e-37	147.00
IUUC-Yli-134551	Yarrowia lipolytica	23.99	8.00e-22	97.40
IUUC-Zma-134703	Zea mays	42.99	4.00e-89	320.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence