iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Olo-080716

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
KN538778.1_FG007	KN538778.1_FGT007	KN538778.1_FGP007

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.30e-21	75.6	274	308
E3 adaptor/Cullin RING/APC_C/CDC20	8.30e-129	429.8	140	427

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           gH ++v++l++ +d + l+sG++D+++ vW+ r++
   Q: 274  GHRSEVCGLKWsHDdRELASGGNDNQLLVWNQRSQ 308
           8***********55599**************7776 PP

E3 adaptor/Cullin RING/APC_C/CDC20

   S: 1    pekvldapelrddfylnLldWssknvlavaLgssvylwsaktgdvskladleekdlvtsvswieegtllavGtkkgeveiyDveekkkvrtl 92
           p+kvldap+l+ddfylnL+dWss+n+lav+Lg++vylwsa++ +v+kl+dl ++d+v++v+w++eg++la+Gt+ g v+i+D +++k++r++
   Q: 140  PHKVLDAPSLQDDFYLNLVDWSSQNTLAVGLGNCVYLWSASNCKVTKLCDLGPRDSVCAVHWTREGSYLAIGTSLGDVQIWDSSRCKRIRNM 231
           689***************************************************************************************** PP
   S: 93   tghsarvgaLsWnaevlssGsrdgeilhrdvrvkelklstlqahaqevCGlkwnedaklLasGGnDnsvsvwdasssePlkkfkehkaavka 184
            gh++r g L+W + +lssGsrd++il++d+rv+   +s++++h++evCGlkw++d+++LasGGnDn++ vw+++s++P+ + +eh+aavka
   Q: 232  GGHQTRTGVLAWSSRILSSGSRDKNILQHDIRVPSDYISKFSGHRSEVCGLKWSHDDRELASGGNDNQLLVWNQRSQQPILRLTEHTAAVKA 323
           ******************************************************************************************** PP
   S: 185  iawsPwqkslLasGGGtaDrcikfwntltgalleeidtgsqvcsllwskkskelvsthGfaenkitlwkypslskvaelkgheaRvlslals 276
           iawsP+q++lLasGGGtaDrci+fwnt              vc+l+w k+ +elvsthG+++n+i++wkyps+skva+l+gh++Rvl+la+s
   Q: 324  IAWSPHQQGLLASGGGTADRCIRFWNT--------------VCNLAWCKNVNELVSTHGYSQNQIMVWKYPSMSKVATLTGHTLRVLYLAMS 401
           **************************8..............8************************************************** PP
   S: 277  pdgeaivtaagDetlrfwklfdkkka 302
           pdg++ivt+agDetlrfw++f + k+
   Q: 402  PDGQTIVTGAGDETLRFWNIFPSMKT 427
           *********************88766 PP

Organism

Oryza longistaminata

Protein Sequence
(Fasta)

MAGGLRLDPT VASPARLLLD VPKTPSPSKT TYSDRFIPCR SSSRLHNFAL LDRDRASPSS 60
TTDDAPYSRL LRAEIFGPDS PSPAPSSPNT NLFRFKTDHP SPKSPFAASA AATAGHYDCT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTGGGG GGCTCCGCCT CGATCCCACC GTCGCCTCCC CGGCCCGCCT CCTCCTCGAC 60
GTCCCCAAGA CGCCATCCCC TTCCAAGACC ACGTACAGCG ACCGCTTCAT CCCCTGCCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003035	Amborella trichopoda	70.41	2.00e-174	604.00
IUUC-Aly-006009	Arabidopsis lyrata	69.12	9.00e-161	558.00
IUUC-Ath-007167	Arabidopsis thaliana	70.75	1.00e-161	561.00
IUUC-Bdi-015033	Brachypodium distachyon	76.04	0.00e+00	669.00
IUUC-Bol-016159	Brassica oleracea	67.76	3.00e-160	557.00
IUUC-Bra-017745	Brassica rapa	67.61	2.00e-159	554.00
IUUC-Cre-022944	Chlamydomonas reinhardtii	47.22	8.00e-101	359.00
IUUC-Gma-043563	Glycine max	69.32	1.00e-166	578.00
IUUC-Hvu-047486	Hordeum vulgare	88.81	3.00e-149	519.00
IUUC-Lpe-051568	Leersia perrieri	87.05	0.00e+00	751.00
IUUC-Mtr-057760	Medicago truncatula	66.96	4.00e-164	570.00
IUUC-Mac-064942	Musa acuminata	72.93	0.00e+00	643.00
IUUC-Oba-075417	Oryza barthii	99.72	0.00e+00	647.00
IUUC-Obr-076033	Oryza brachyantha	92.91	0.00e+00	725.00
IUUC-Ogl-077441	Oryza glaberrima	96.61	0.00e+00	779.00
IUUC-Ogu-078877	Oryza glumaepatula	98.83	0.00e+00	799.00
IUUC-Oin-079461	Oryza indica	99.77	0.00e+00	790.00
IUUC-Ome-081663	Oryza meridionalis	95.48	0.00e+00	1373.00
IUUC-Oni-083097	Oryza nivara	99.77	0.00e+00	788.00
IUUC-Opu-083464	Oryza punctata	98.83	0.00e+00	779.00
IUUC-Oru-084848	Oryza rufipogon	99.77	0.00e+00	788.00
IUUC-Osa-085451	Oryza sativa	96.61	0.00e+00	779.00
IUUC-Ppa-095366	Physcomitrella patens	63.21	2.00e-158	551.00
IUUC-Pop-099269	Populus trichocarpa	73.38	2.00e-168	584.00
IUUC-Ppe-101285	Prunus persica	69.21	5.00e-166	576.00
IUUC-Sja-107900	Schizosaccharomyces japonicus	45.96	3.00e-108	384.00
IUUC-Sit-110550	Setaria italica	82.52	0.00e+00	721.00
IUUC-Sly-111395	Solanum lycopersicum	73.16	2.00e-167	581.00
IUUC-Stu-112356	Solanum tuberosum	73.10	1.00e-169	588.00
IUUC-Sbi-114386	Sorghum bicolor	81.24	0.00e+00	670.00
IUUC-Tca-121682	Theobroma cacao	74.40	2.00e-170	591.00
IUUC-Tae-123028	Triticum aestivum	80.80	0.00e+00	681.00
IUUC-Tur-126545	Triticum urartu	79.18	3.00e-142	496.00
IUUC-Vvi-131748	Vitis vinifera	73.46	4.00e-170	590.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence