iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099861

UUCD1 version

UUC-PoT-01574

Ensembl Protein ID

POPTR_0018s00610.1

UniProt Accession

A9PEE9; A9PEE9_POPTR

Genbank Protein ID

ABK94752.1; EEF03375.1

Protein Name

Ubiquitin-conjugating enzyme family protein

Genbank Nucleotide ID

EF146699; CM000354

Gene Name

POPTRDRAFT_835782; POPTR_0018s00610g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0018s00610	POPTR_0018s00610.1	POPTR_0018s00610.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	1.70e-41	142.3	7	143

Active Site

Position(s)	Description	Evidence
90	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    Rlkkelkelekdpp..egisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyen.GkvClsilke 88
           Rl ke+ke++++++  + i++ ++d  ++++w +li Gp++tp+eggvF+l +++pe+YP++PP+v+fltkifhPnv+ + G++Cl+ilk 
   Q: 7    RLFKEYKEVQREKVadPDIQIACDDT-NIFKWTALIKGPSETPFEGGVFQLVFSVPEQYPLQPPQVRFLTKIFHPNVHFKtGEICLDILK- 95
           899******99988557888888888.9**************************************************888********9. PP
   S: 89   eekWspalsvesvllsiqsllaepnpesplneeaaellkknre.eykkk 136
            ++Wspa++++sv+ +i++l+a+p+p+spln ++ +ll++ +   y+++
   Q: 96   -NAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVrGYQSM 143
           .*********************************999987654256665 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MQASRARLFK EYKEVQREKV ADPDIQIACD DTNIFKWTAL IKGPSETPFE GGVFQLVFSV 60
PEQYPLQPPQ VRFLTKIFHP NVHFKTGEIC LDILKNAWSP AWTLQSVCRA IIALMAHPEP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACTAATTAT CGAATCGAAT CGAAGAAGCT CCTCCTCCTC CTCCTCCACC CTCTCTTCTC 60
AATAACTATT AGGTGAGATT CTAATTCTAA TCCTAATCTA CTTCTTAATT ACTTTCAATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005524--F:ATP binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0031625--F:ubiquitin protein ligase binding

KEGG

pop:POPTR_0018s00610g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ppa-095796	Physcomitrella patens	78.06	4.00e-73	266.00
IUUC-Sce-106171	Saccharomyces cerevisiae	38.96	8.00e-29	119.00
IUUC-Sja-107788	Schizosaccharomyces japonicus	48.78	1.00e-37	148.00
IUUC-Spo-108341	Schizosaccharomyces pombe	47.10	5.00e-40	155.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence