iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-098977

Ensembl Protein ID

POPTR_0005s09740.2

UniProt Accession

B9H605; B9H606; B9H605_POPTR

Genbank Protein ID

EEE93390.2; EEE93391.2; ERP60755.1; ERP60756.1; ERP60757.1; ERP60758.1; ERP60759.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000341; CM000341; CM000341; CM000341; CM000341; CM000341; CM000341

Gene Name

POPTRDRAFT_558713; POPTR_0005s09740g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0005s09740	POPTR_0005s09740.2	POPTR_0005s09740.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	5.70e-08	33.6	741	801

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 14   tlkvnpsdtVaeLKekiekklgippeqqrLiykGkiLeddktLadyglkdgstihllekksg 75
           t++ + s+tV+ LKeki ++  +p+++q+L  k   L+d+ +La+y++ +g  + l ++++g
   Q: 741  TMQ-SLSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDNMSLAYYNVGPGELLALSLRERG 801
           333.8899***********************9999****************99999888876 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSSTAILPLP APPVNGDGSP PPPSQVVEQQ PREDRPASEE QSRAPVATHT RTIGIIHPPP 60
DIRSIVDKTS QFVAKNGPEF EKRIIANNAN NAKFNFLNSS DPYHAYYQHR LAEFRAQNQA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAAAATCTTC ACTGGATCTC TCTTACACTC TCTGTCTTTC TCTCTCTTTG TATAAAACCC 60
TAGCAGATCG AAATTCCCTA ATCTCAATCC TTTCTACTCC ATAGTAAGTT ATCTTTCCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR022030--SF3A1
IPR000061--Surp
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50128--SURP
PS50053--UBIQUITIN_2

Pfam

PF12230--PRP21_like_P
PF01805--Surp
PF00240--ubiquitin

SMART

SM00648--SWAP
SM00213--UBQ

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0005686--C:U2 snRNP
GO:0071004--C:U2-type prespliceosome
GO:0003723--F:RNA binding
GO:0000389--P:mRNA 3'-splice site recognition
GO:0000381--P:regulation of alternative mRNA splicing, via spliceosome

KEGG

pop:POPTR_0005s09740g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007275	Arabidopsis thaliana	73.30	0.00e+00	738.00
IUUC-Ani-009307	Aspergillus nidulans	38.46	4.00e-39	155.00
IUUC-Bol-015903	Brassica oleracea	64.43	0.00e+00	824.00
IUUC-Bra-017856	Brassica rapa	65.88	0.00e+00	739.00
IUUC-Cho-024581	Choloepus hoffmanni	44.33	1.00e-54	207.00
IUUC-Cin-025640	Ciona intestinalis	39.33	4.00e-60	226.00
IUUC-Csv-025855	Ciona savignyi	42.47	1.00e-60	227.00
IUUC-Cne-026952	Cryptococcus neoformans	31.12	1.00e-49	191.00
IUUC-Dme-031975	Drosophila melanogaster	37.07	6.00e-68	251.00
IUUC-Ggr-039932	Gaeumannomyces graminis	35.04	3.00e-28	119.00
IUUC-Gma-043382	Glycine max	76.97	0.00e+00	981.00
IUUC-Lma-053219	Leptosphaeria maculans	29.39	2.00e-27	116.00
IUUC-Mor-057214	Magnaporthe oryzae	37.09	4.00e-29	122.00
IUUC-Mpo-057385	Magnaporthe poae	28.48	1.00e-06	46.60
IUUC-Mac-065644	Musa acuminata	66.96	0.00e+00	890.00
IUUC-Oan-073616	Ornithorhynchus anatinus	54.90	1.00e-09	55.50
IUUC-Pno-095106	Phaeosphaeria nodorum	30.27	5.00e-21	95.10
IUUC-Ppa-095510	Physcomitrella patens	65.38	2.00e-162	565.00
IUUC-Pca-100776	Procavia capensis	44.25	1.00e-18	88.20
IUUC-Ppe-101595	Prunus persica	76.83	0.00e+00	941.00
IUUC-Pte-104226	Pyrenophora teres	31.16	2.00e-27	116.00
IUUC-Pyt-104732	Pyrenophora triticirepentis	31.69	2.00e-29	122.00
IUUC-Stu-112703	Solanum tuberosum	83.30	0.00e+00	714.00
IUUC-Sre-115196	Sporisorium reilianum	31.02	5.00e-45	175.00
IUUC-Tca-121156	Theobroma cacao	79.90	0.00e+00	988.00
IUUC-Tvi-122326	Trichoderma virens	38.54	7.00e-41	161.00
IUUC-Tur-126352	Triticum urartu	72.68	2.00e-146	512.00
IUUC-Tme-126996	Tuber melanosporum	36.69	1.00e-42	166.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence