iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sja-107870

Ensembl Protein ID

EEB05732

UniProt Accession

B6JWI1; B6JWI1_SCHJY

Genbank Protein ID

EEB05732.1

Protein Name

Rik1-associated factor Raf1

Genbank Nucleotide ID

KE651166

Gene Name

SJAG_00756

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SJAG_00756	EEB05732	EEB05732

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-09	35.6	556	577

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 11   f.sd.tllvsGsdDgtikvWDl 30
           + +d   +++G+ Dg++k WD+
   Q: 556  WqPDgSVFITGGSDGVVKAWDP 577
           8989899**************6 PP

Organism

Schizosaccharomyces japonicus

Protein Sequence
(Fasta)

MNVHEKRPHT LSPEHKLTAS KTQKLDDYFL DSEEVNDEFE VYDPLDDIPI PKTRPREAVA 60
LVHPAPNGPL KNGEDELAFT LSAGDFAPAS RPYLSKRARE MPWSFSSEKT HAKLQGKIIH 120

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Nucleotide Sequence
(Fasta)

ATGAACGTTC ACGAGAAACG GCCGCACACG CTGTCTCCAG AGCATAAACT CACGGCTTCA 60
AAAACCCAAA AACTTGATGA CTATTTCCTC GACTCAGAAG AAGTTAACGA CGAATTTGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0034507--C:chromosome, centromeric outer repeat region
GO:0000781--C:chromosome, telomeric region
GO:0043494--C:CLRC ubiquitin ligase complex
GO:0005829--C:cytosol
GO:0034613--P:cellular protein localization
GO:1990141--P:chromatin silencing at centromere outer repeat region
GO:0030466--P:chromatin silencing at silent mating-type cassette
GO:0006348--P:chromatin silencing at telomere
GO:0031048--P:chromatin silencing by small RNA
GO:0045141--P:meiotic telomere clustering
GO:0051572--P:negative regulation of histone H3-K4 methylation
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:0051574--P:positive regulation of histone H3-K9 methylation
GO:0031494--P:regulation of mating type switching

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000846	Aegilops tauschii	22.49	9.00e-11	60.10
IUUC-Atr-002668	Amborella trichopoda	21.70	8.00e-12	63.90
IUUC-Acl-008065	Aspergillus clavatus	37.91	2.00e-19	88.20
IUUC-Afl-008436	Aspergillus flavus	26.40	8.00e-24	104.00
IUUC-Afu-009043	Aspergillus fumigatus	25.35	2.00e-23	102.00
IUUC-Ani-009382	Aspergillus nidulans	25.80	5.00e-26	111.00
IUUC-Ang-009753	Aspergillus niger	26.48	1.00e-19	90.50
IUUC-Aor-010020	Aspergillus oryzae	25.84	7.00e-24	103.00
IUUC-Ate-010564	Aspergillus terreus	26.65	6.00e-26	111.00
IUUC-Bci-013668	Botrytis cinerea	21.98	6.00e-18	85.10
IUUC-Bdi-014501	Brachypodium distachyon	24.57	1.00e-11	63.50
IUUC-Cgl-026459	Colletotrichum gloeosporioides	31.34	2.00e-23	102.00
IUUC-Dse-031276	Dothistroma septosporum	22.94	2.00e-14	72.00
IUUC-Fox-037886	Fusarium oxysporum	21.79	1.00e-20	93.20
IUUC-Fso-038210	Fusarium solani	28.57	2.00e-22	99.80
IUUC-Ggr-039952	Gaeumannomyces graminis	36.76	7.00e-17	81.30
IUUC-Lpe-051545	Leersia perrieri	23.05	1.00e-10	60.10
IUUC-Lma-053206	Leptosphaeria maculans	29.10	2.00e-19	90.10
IUUC-Mor-057085	Magnaporthe oryzae	36.13	4.00e-15	75.10
IUUC-Mpo-057324	Magnaporthe poae	34.81	5.00e-16	78.20
IUUC-Mac-064887	Musa acuminata	24.26	4.00e-08	50.40
IUUC-Nfi-068408	Neosartorya fischeri	23.86	9.00e-23	100.00
IUUC-Obr-076372	Oryza brachyantha	23.46	3.00e-09	55.10
IUUC-Ogl-076950	Oryza glaberrima	23.74	2.00e-10	59.70
IUUC-Ogu-078500	Oryza glumaepatula	21.25	8.00e-07	47.40
IUUC-Oni-082022	Oryza nivara	21.25	5.00e-07	47.80
IUUC-Opu-083211	Oryza punctata	23.46	2.00e-10	58.90
IUUC-Osa-085998	Oryza sativa	23.74	1.00e-10	59.70
IUUC-Pno-095108	Phaeosphaeria nodorum	23.04	3.00e-26	112.00
IUUC-Pte-104227	Pyrenophora teres	24.04	8.00e-24	104.00
IUUC-Pyt-104536	Pyrenophora triticirepentis	23.20	1.00e-22	100.00
IUUC-Spo-108270	Schizosaccharomyces pombe	46.42	4.00e-154	536.00
IUUC-Ssl-108569	Sclerotinia sclerotiorum	24.00	2.00e-18	86.30
IUUC-Smo-108929	Selaginella moellendorffii	25.12	1.00e-10	59.30
IUUC-Sit-110580	Setaria italica	22.42	1.00e-08	53.10
IUUC-Sbi-114718	Sorghum bicolor	23.32	2.00e-14	72.40
IUUC-Tre-122228	Trichoderma reesei	34.59	5.00e-17	81.30
IUUC-Tvi-122460	Trichoderma virens	36.44	8.00e-19	87.40
IUUC-Tae-125712	Triticum aestivum	24.29	2.00e-10	59.30
IUUC-Tur-126661	Triticum urartu	23.20	3.00e-10	58.50
IUUC-Vda-129672	Verticillium dahliae	25.41	2.00e-25	109.00
IUUC-Zma-135703	Zea mays	23.63	3.00e-15	75.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence