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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Ath-007407
UUCD1 version UUC-ArT-00307
Ensembl Protein ID AT4G21530.1
UniProt Accession O65418; APC4_ARATH
Genbank Protein ID CAA18717.1; CAB81260.1; AEE84463.1; AT4G21530.1
Protein Name Anaphase-promoting complex subunit 4; Cyclosome subunit 4
Genbank Nucleotide ID AL022603; AL161555; CP002687; AK228871
Gene Name APC4; At4g21530; F18E5.150
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT4G21530 AT4G21530.1 AT4G21530.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
iRefIndexPINAHINT
Protein Expression/Proteomics
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 adaptor/Cullin RING/APC_C/APC_C 24.56 4.00e-36 151.00 IUUC-Hsa-046958
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description


     Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex controls several key steps in the cell cycle by mediating ubiquitination and subsequent degradation of target proteins such as cyclins. The APC/C complex is required for the female gametophyte development and is involved in several aspect of development by controlling cell division and cell elongation. Involved in the control of endoreduplication (By similarity).
 Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex controls several key steps in the cell cycle by mediating ubiquitination and subsequent degradation of target proteins such as cyclins. The APC/C complex is required for the female gametophyte development and is involved in several aspect of development by controlling cell division and cell elongation. Involved in the control of endoreduplication (By similarity).
Protein Sequence
(Fasta)
MSEMASDEEE NIIPFQLQFD KPIPFQIKIA EWNPEKDLLA MVTEDSKILL HRFNWQRLWT 60
ISPGKPVTSL CWRPDGKAIA VGLEDGTISL HDVENGKLLR NLKPHDVAVV CLNWEEDGQS 120
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Protein Fasta Sequence


>IUUC-Ath-007407|E3,APC_C|Arabidopsis thaliana
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Nucleotide Sequence
(Fasta)
CGCCAGGTTT GTCATTAGTG CGTCTCTCTC TTCTCCCGGC GGATCGGCGA ATCCCGGCGA 60
CCACCGTCTT CTTTCCTTTA TCCACTCTCT ACAGCTTTCT TCTCAAGTGT TTCTCTCTAG 120
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Nucleotide Fasta Sequence


>IUUC-Ath-007407|E3,APC_C|Arabidopsis thaliana
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Sequence Source Ensembl
Keyword

KW-0131--Cell cycle
KW-0132--Cell division
KW-0181--Complete proteome
KW-0498--Mitosis
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0833--Ubl conjugation pathway
KW-0853--WD repeat
Interpro

IPR024789--APC4
IPR024790--APC4_long_dom
IPR024977--Apc4_WD40_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
PROSITE

PS50294--WD_REPEATS_REGION
Pfam

PF12896--ANAPC4
PF12894--ANAPC4_WD40
SMART

SM00320--WD40
Gene Ontology

GO:0005680--C:anaphase-promoting complex
GO:0005634--C:nucleus
GO:0031145--P:anaphase-promoting complex-dependent catabolic process
GO:0051301--P:cell division
GO:0009793--P:embryo development ending in seed dormancy
GO:0007067--P:mitotic nuclear division
GO:0048481--P:plant ovule development
GO:0016567--P:protein ubiquitination
GO:0030071--P:regulation of mitotic metaphase/anaphase transition
KEGG ath:AT4G21530
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002338 Ailuropoda melanoleuca 24.34 2.00e-37 150.00
IUUC-Atr-003115 Amborella trichopoda 56.74 0.00e+00 822.00
IUUC-Apl-003682 Anas platyrhynchos 25.89 2.00e-32 133.00
IUUC-Aca-005052 Anolis carolinensis 27.07 3.00e-41 162.00
IUUC-Acl-008322 Aspergillus clavatus 21.76 3.00e-12 66.60
IUUC-Afl-008731 Aspergillus flavus 21.51 1.00e-14 75.10
IUUC-Afu-008986 Aspergillus fumigatus 24.54 3.00e-09 56.60
IUUC-Ani-009236 Aspergillus nidulans 21.13 4.00e-14 73.20
IUUC-Ang-009689 Aspergillus niger 19.42 4.00e-06 46.20
IUUC-Ate-010504 Aspergillus terreus 29.75 1.00e-07 51.20
IUUC-Ame-011676 Astyanax mexicanus 23.11 2.00e-38 153.00
IUUC-Bgr-012272 Blumeria graminis 21.26 5.00e-13 69.30
IUUC-Bta-013421 Bos taurus 24.56 1.00e-38 154.00
IUUC-Bdi-014507 Brachypodium distachyon 53.19 0.00e+00 785.00
IUUC-Bol-015675 Brassica oleracea 88.99 0.00e+00 1350.00
IUUC-Bra-017735 Brassica rapa 88.73 0.00e+00 1318.00
IUUC-Cja-019695 Callithrix jacchus 24.18 5.00e-36 145.00
IUUC-Cfa-020688 Canis familiaris 24.34 3.00e-37 149.00
IUUC-Cpo-022263 Cavia porcellus 24.40 2.00e-36 146.00
IUUC-Csa-023068 Chlorocebus sabaeus 24.34 1.00e-37 150.00
IUUC-Cho-024289 Choloepus hoffmanni 24.34 3.00e-17 82.80
IUUC-Cin-025329 Ciona intestinalis 24.52 8.00e-10 57.80
IUUC-Dre-028148 Danio rerio 25.76 1.00e-20 94.70
IUUC-Dno-028901 Dasypus novemcinctus 28.21 4.00e-14 72.40
IUUC-Dor-030642 Dipodomys ordii 25.28 1.00e-15 78.20
IUUC-Dse-031568 Dothistroma septosporum 35.00 1.00e-05 45.10
IUUC-Eca-033983 Equus caballus 24.34 2.00e-37 150.00
IUUC-Eeu-035203 Erinaceus europaeus 22.46 1.00e-21 98.20
IUUC-Fca-036269 Felis catus 24.34 7.00e-37 148.00
IUUC-Fal-036650 Ficedula albicollis 27.78 1.00e-41 164.00
IUUC-Fso-038390 Fusarium solani 21.05 3.00e-10 60.10
IUUC-Gmo-039161 Gadus morhua 25.16 3.00e-33 136.00
IUUC-Gga-041031 Gallus gallus 31.31 1.00e-16 79.00
IUUC-Gac-042424 Gasterosteus aculeatus 23.58 3.00e-36 146.00
IUUC-Gma-043402 Glycine max 66.45 0.00e+00 1004.00
IUUC-Ggo-045199 Gorilla gorilla 24.56 6.00e-38 152.00
IUUC-Hsa-046958 Homo sapiens 24.56 5.00e-38 152.00
IUUC-Itr-049044 Ictidomys tridecemlineatus 24.34 5.00e-38 152.00
IUUC-Kpa-049219 Komagataella pastoris 34.52 2.00e-10 60.10
IUUC-Lpe-050838 Leersia perrieri 51.92 0.00e+00 737.00
IUUC-Loc-052502 Lepisosteus oculatus 25.28 1.00e-38 154.00
IUUC-Lma-053262 Leptosphaeria maculans 33.70 2.00e-07 50.80
IUUC-Laf-054361 Loxodonta africana 24.56 7.00e-38 151.00
IUUC-Mcc-054893 Macaca mulatta 24.34 1.00e-37 150.00
IUUC-Mor-056950 Magnaporthe oryzae 20.58 4.00e-14 72.80
IUUC-Mpo-057479 Magnaporthe poae 20.83 8.00e-17 82.00
IUUC-Mtr-058751 Medicago truncatula 64.36 0.00e+00 988.00
IUUC-Mga-059591 Meleagris gallopavo 27.96 2.00e-34 140.00
IUUC-Mmr-060603 Microcebus murinus 24.34 1.00e-37 150.00
IUUC-Mdo-062137 Monodelphis domestica 24.30 1.00e-36 147.00
IUUC-Mmu-064358 Mus musculus 23.67 1.00e-35 144.00
IUUC-Mac-064679 Musa acuminata 58.76 2.00e-148 518.00
IUUC-Mpu-065751 Mustela putorius furo 24.34 3.00e-37 149.00
IUUC-Mlu-067502 Myotis lucifugus 23.99 5.00e-37 149.00
IUUC-Nfi-068257 Neosartorya fischeri 21.54 8.00e-16 78.60
IUUC-Ncr-068721 Neurospora crassa 20.62 5.00e-09 56.20
IUUC-Nle-069134 Nomascus leucogenys 24.34 1.00e-37 151.00
IUUC-Opr-071225 Ochotona princeps 24.18 9.00e-32 131.00
IUUC-Ont-072232 Oreochromis niloticus 23.76 3.00e-33 136.00
IUUC-Oan-073358 Ornithorhynchus anatinus 26.22 3.00e-37 149.00
IUUC-Oba-075232 Oryza barthii 50.20 0.00e+00 677.00
IUUC-Oin-079188 Oryza indica 49.39 0.00e+00 677.00
IUUC-Opu-083725 Oryza punctata 52.19 0.00e+00 734.00
IUUC-Osa-086145 Oryza sativa 74.78 5.00e-52 195.00
IUUC-Ola-086672 Oryzias latipes 25.89 3.00e-35 143.00
IUUC-Oga-088691 Otolemur garnettii 24.34 1.00e-37 150.00
IUUC-Oar-089607 Ovis aries 24.34 1.00e-37 150.00
IUUC-Ptr-090893 Pan troglodytes 24.56 5.00e-38 152.00
IUUC-Pan-092793 Papio anubis 24.34 2.00e-37 150.00
IUUC-Psi-093143 Pelodiscus sinensis 26.04 2.00e-35 143.00
IUUC-Pma-094645 Petromyzon marinus 24.51 2.00e-28 119.00
IUUC-Pno-094772 Phaeosphaeria nodorum 27.27 5.00e-05 42.40
IUUC-Ppa-095509 Physcomitrella patens 39.52 6.00e-131 461.00
IUUC-Pfo-096716 Poecilia formosa 25.95 8.00e-37 148.00
IUUC-Pab-098772 Pongo abelii 24.78 3.00e-38 153.00
IUUC-Pop-099247 Populus trichocarpa 70.32 0.00e+00 1037.00
IUUC-Pca-101083 Procavia capensis 22.46 3.00e-22 99.80
IUUC-Ppe-101619 Prunus persica 70.20 0.00e+00 1026.00
IUUC-Pva-103168 Pteropus vampyrus 24.34 2.00e-37 150.00
IUUC-Pyt-104524 Pyrenophora triticirepentis 30.69 7.00e-06 45.80
IUUC-Rno-105693 Rattus norvegicus 23.67 9.00e-36 144.00
IUUC-Sha-106567 Sarcophilus harrisii 23.46 5.00e-39 155.00
IUUC-Sja-107773 Schizosaccharomyces japonicus 22.17 8.00e-20 91.70
IUUC-Spo-108176 Schizosaccharomyces pombe 19.50 4.00e-10 59.30
IUUC-Ssl-108414 Sclerotinia sclerotiorum 20.09 7.00e-15 75.50
IUUC-Smo-108903 Selaginella moellendorffii 44.78 8.00e-34 137.00
IUUC-Sit-110467 Setaria italica 52.71 0.00e+00 754.00
IUUC-Sly-111734 Solanum lycopersicum 64.58 0.00e+00 972.00
IUUC-Sar-112993 Sorex araneus 24.79 1.00e-07 50.80
IUUC-Sbi-114693 Sorghum bicolor 51.00 0.00e+00 738.00
IUUC-Ssc-115237 Sus scrofa 24.34 2.00e-37 150.00
IUUC-Tgu-116897 Taeniopygia guttata 27.33 6.00e-41 162.00
IUUC-Tru-117802 Takifugu rubripes 25.60 2.00e-35 143.00
IUUC-Tsy-119583 Tarsius syrichta 25.93 2.00e-21 96.70
IUUC-Tni-120268 Tetraodon nigroviridis 23.66 1.00e-19 90.50
IUUC-Tca-121296 Theobroma cacao 70.20 0.00e+00 1083.00
IUUC-Tae-123786 Triticum aestivum 52.79 0.00e+00 774.00
IUUC-Tbe-127711 Tupaia belangeri 24.11 6.00e-31 128.00
IUUC-Ttr-128537 Tursiops truncatus 25.40 1.00e-20 94.40
IUUC-Vda-130028 Verticillium dahliae 21.54 1.00e-08 54.30
IUUC-Vpa-130111 Vicugna pacos 24.79 1.00e-07 50.80
IUUC-Vvi-131490 Vitis vinifera 69.28 0.00e+00 1044.00
IUUC-Xtr-132380 Xenopus tropicalis 28.51 2.00e-41 163.00
IUUC-Xma-133597 Xiphophorus maculatus 25.95 8.00e-37 148.00
IUUC-Yli-134609 Yarrowia lipolytica 28.28 6.00e-08 52.00
Created Date 25-Jun-2017

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