iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sha-107563

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEFK01134682

Gene Name

RNF13

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000018871.1	ENSSHAT00000022475.1	ENSSHAP00000022297.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.50e-09	36.8	240	282

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl++++dg  +++lpC H++h +C+  w     +++++ +CP+C+
   Q: 240  CAICLDEYEDGdkLRILPCSHAYHCKCVDPW-----LTKTKKTCPVCK 282
           ********66666******************.....899********7 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

MLLSIGMLML SATQIYTILT VQLFAFFNLL PVEADILAYN FENVSQTFDD LPARFGYRLP 60
TEGLKGFLIN SKPENACEPI APPPLKDNSS SAFIVLIRRL DCNFDIKVLH AQKAGYKAAI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGATTAAGA TGCTGTTATC CATAGGAATG TTAATGTTGT CAGCCACGCA GATATATACT 60
ATTTTGACTG TCCAGCTGTT TGCATTCTTT AACTTATTAC CTGTGGAGGC AGACATTTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR003137--PA_domain
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF02225--PA
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005829--C:cytosol
GO:0016021--C:integral component of membrane
GO:0031902--C:late endosome membrane
GO:0005765--C:lysosomal membrane
GO:0005654--C:nucleoplasm
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0051865--P:protein autoubiquitination

KEGG

shr:100915937

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001909	Ailuropoda melanoleuca	92.15	1.00e-179	622.00
IUUC-Apl-004022	Anas platyrhynchos	89.27	2.00e-173	601.00
IUUC-Aca-004641	Anolis carolinensis	87.50	5.00e-168	583.00
IUUC-Acl-008256	Aspergillus clavatus	58.33	7.00e-14	71.20
IUUC-Afl-008548	Aspergillus flavus	60.00	2.00e-13	69.70
IUUC-Afu-008977	Aspergillus fumigatus	60.00	4.00e-13	68.90
IUUC-Ani-009337	Aspergillus nidulans	46.30	3.00e-13	68.20
IUUC-Ang-009734	Aspergillus niger	60.00	7.00e-14	71.60
IUUC-Aor-010134	Aspergillus oryzae	60.00	2.00e-13	70.10
IUUC-Ame-010635	Astyanax mexicanus	74.35	2.00e-137	481.00
IUUC-Bta-012593	Bos taurus	91.62	0.00e+00	642.00
IUUC-Bci-013936	Botrytis cinerea	35.14	7.00e-13	68.60
IUUC-Bra-017689	Brassica rapa	32.74	8.00e-34	137.00
IUUC-Cel-018181	Caenorhabditis elegans	31.72	9.00e-29	120.00
IUUC-Cja-019353	Callithrix jacchus	91.36	5.00e-178	616.00
IUUC-Cfa-020234	Canis familiaris	92.41	9.00e-180	622.00
IUUC-Cpo-021602	Cavia porcellus	90.12	4.00e-153	533.00
IUUC-Csa-023201	Chlorocebus sabaeus	91.88	1.00e-179	622.00
IUUC-Cho-024954	Choloepus hoffmanni	77.75	5.00e-144	503.00
IUUC-Cin-025554	Ciona intestinalis	42.66	4.00e-61	228.00
IUUC-Cgl-026762	Colletotrichum gloeosporioides	35.71	9.00e-14	71.20
IUUC-Dre-028744	Danio rerio	79.08	2.00e-138	484.00
IUUC-Dno-029675	Dasypus novemcinctus	91.88	1.00e-178	618.00
IUUC-Dor-030791	Dipodomys ordii	77.49	2.00e-134	471.00
IUUC-Dse-031406	Dothistroma septosporum	43.33	2.00e-12	68.20
IUUC-Dme-031765	Drosophila melanogaster	40.43	3.00e-51	196.00
IUUC-Ete-032577	Echinops telfairi	83.65	5.00e-136	476.00
IUUC-Eca-034148	Equus caballus	90.58	4.00e-177	613.00
IUUC-Eeu-034552	Erinaceus europaeus	90.58	2.00e-172	597.00
IUUC-Fca-036021	Felis catus	92.15	3.00e-179	620.00
IUUC-Fal-037621	Ficedula albicollis	89.27	7.00e-170	589.00
IUUC-Fox-038011	Fusarium oxysporum	35.79	1.00e-13	71.20
IUUC-Gmo-039485	Gadus morhua	78.50	4.00e-133	467.00
IUUC-Ggr-039824	Gaeumannomyces graminis	50.00	3.00e-12	67.40
IUUC-Gga-041166	Gallus gallus	90.05	6.00e-175	606.00
IUUC-Gac-042124	Gasterosteus aculeatus	77.50	3.00e-130	457.00
IUUC-Ggo-045344	Gorilla gorilla	91.62	4.00e-179	620.00
IUUC-Hsa-045960	Homo sapiens	91.62	4.00e-179	620.00
IUUC-Itr-048327	Ictidomys tridecemlineatus	91.62	2.00e-179	621.00
IUUC-Lch-050635	Latimeria chalumnae	81.88	9.00e-134	469.00
IUUC-Lpe-051526	Leersia perrieri	33.45	1.00e-29	124.00
IUUC-Loc-052869	Lepisosteus oculatus	79.20	9.00e-140	489.00
IUUC-Lma-053199	Leptosphaeria maculans	56.25	8.00e-14	71.60
IUUC-Laf-054477	Loxodonta africana	90.58	2.00e-177	614.00
IUUC-Mcc-055232	Macaca mulatta	91.88	1.00e-179	622.00
IUUC-Meu-056237	Macropus eugenii	87.50	5.00e-123	433.00
IUUC-Mor-057236	Magnaporthe oryzae	57.78	3.00e-13	69.70
IUUC-Mtr-058129	Medicago truncatula	33.85	3.00e-30	125.00
IUUC-Mla-059171	Melampsora laricipopulina	38.57	2.00e-10	60.50
IUUC-Mga-059780	Meleagris gallopavo	90.31	5.00e-175	606.00
IUUC-Mvi-060468	Microbotryum violaceum	46.00	3.00e-12	67.00
IUUC-Mmr-061384	Microcebus murinus	93.26	4.00e-175	607.00
IUUC-Mdo-062781	Monodelphis domestica	98.43	0.00e+00	652.00
IUUC-Mmu-063727	Mus musculus	89.01	2.00e-166	578.00
IUUC-Mpu-066497	Mustela putorius furo	92.15	9.00e-180	622.00
IUUC-Mlu-067654	Myotis lucifugus	93.99	2.00e-113	401.00
IUUC-Nfi-068514	Neosartorya fischeri	60.00	3.00e-13	69.30
IUUC-Nle-069368	Nomascus leucogenys	91.62	4.00e-179	620.00
IUUC-Opr-070934	Ochotona princeps	66.75	9.00e-109	386.00
IUUC-Ont-071868	Oreochromis niloticus	76.18	2.00e-127	448.00
IUUC-Oan-072733	Ornithorhynchus anatinus	90.04	1.00e-106	378.00
IUUC-Ocu-074083	Oryctolagus cuniculus	91.88	4.00e-179	620.00
IUUC-Ogu-078205	Oryza glumaepatula	35.18	4.00e-29	122.00
IUUC-Oru-085122	Oryza rufipogon	33.44	3.00e-29	122.00
IUUC-Ola-086440	Oryzias latipes	74.34	3.00e-115	408.00
IUUC-Oga-088291	Otolemur garnettii	88.17	1.00e-163	568.00
IUUC-Oar-089911	Ovis aries	91.36	0.00e+00	640.00
IUUC-Ptr-091166	Pan troglodytes	91.62	4.00e-179	620.00
IUUC-Pan-092154	Papio anubis	91.88	1.00e-179	622.00
IUUC-Psi-093062	Pelodiscus sinensis	89.53	1.00e-169	588.00
IUUC-Pma-094545	Petromyzon marinus	73.21	6.00e-26	108.00
IUUC-Pno-094907	Phaeosphaeria nodorum	60.00	7.00e-14	71.60
IUUC-Ppa-095928	Physcomitrella patens	34.47	3.00e-31	129.00
IUUC-Pfo-097232	Poecilia formosa	76.80	4.00e-131	461.00
IUUC-Pab-097909	Pongo abelii	91.36	2.00e-179	621.00
IUUC-Pca-100724	Procavia capensis	77.84	9.00e-137	479.00
IUUC-Pva-102624	Pteropus vampyrus	86.65	8.00e-159	552.00
IUUC-Pgr-103420	Puccinia graminis	46.88	2.00e-12	67.80
IUUC-Ptt-103943	Puccinia triticina	44.44	1.00e-10	61.20
IUUC-Pte-104044	Pyrenophora teres	47.27	2.00e-13	70.50
IUUC-Pyt-104748	Pyrenophora triticirepentis	60.00	1.00e-13	70.50
IUUC-Rno-105109	Rattus norvegicus	88.48	1.00e-159	555.00
IUUC-Ssl-108601	Sclerotinia sclerotiorum	41.07	6.00e-13	68.60
IUUC-Smo-109031	Selaginella moellendorffii	31.76	2.00e-38	152.00
IUUC-Sre-115097	Sporisorium reilianum	51.02	1.00e-12	68.20
IUUC-Ssc-116043	Sus scrofa	91.88	2.00e-178	617.00
IUUC-Tgu-116908	Taeniopygia guttata	87.73	1.00e-169	588.00
IUUC-Tru-118219	Takifugu rubripes	77.04	2.00e-132	464.00
IUUC-Tsy-119333	Tarsius syrichta	92.67	8.00e-179	619.00
IUUC-Tni-120332	Tetraodon nigroviridis	72.13	2.00e-86	311.00
IUUC-Tre-121885	Trichoderma reesei	55.56	2.00e-12	66.60
IUUC-Tvi-122495	Trichoderma virens	41.67	2.00e-12	67.00
IUUC-Tae-125320	Triticum aestivum	30.91	1.00e-28	119.00
IUUC-Tbe-127859	Tupaia belangeri	82.41	2.00e-160	557.00
IUUC-Ttr-129219	Tursiops truncatus	83.51	1.00e-152	532.00
IUUC-Uma-129559	Ustilago maydis	52.08	1.00e-12	67.80
IUUC-Vda-129899	Verticillium dahliae	43.40	7.00e-13	68.60
IUUC-Vpa-130314	Vicugna pacos	89.27	3.00e-168	584.00
IUUC-Vvi-131355	Vitis vinifera	34.62	4.00e-30	125.00
IUUC-Xtr-132114	Xenopus tropicalis	77.50	1.00e-135	476.00
IUUC-Xma-133474	Xiphophorus maculatus	76.80	3.00e-131	461.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence