iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cme-027211

Ensembl Protein ID

CMR028CT

UniProt Accession

M1VL15; M1VL15_CYAM1

Genbank Protein ID

BAM82313.1

Protein Name

Replication factor C subunit 1

Genbank Nucleotide ID

AP006500

Gene Name

CYME_CMR028C

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CMR028C	CMR028CT	CMR028CT

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	36.11	1.60e+00	26.60	IUUC-Ots-000053

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Cyanidioschyzon merolae

Protein Sequence
(Fasta)

MPGPSRKSSV SRRRVIIDDD EEDALGADWE PESASAATAQ ARETTPRKRA RQSAVEEAEA 60
RSTGLEQSPQ RSLVNVDEHL VTPPRVTQAR AGAPRGSSPG ENVAEAETPT PSRESIRQRV 120

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Nucleotide Sequence
(Fasta)

ATGCCGGGCC CGAGCCGCAA GTCAAGCGTT TCCAGGAGGC GCGTCATCAT CGACGATGAC 60
GAGGAGGATG CCCTTGGTGC AGACTGGGAA CCGGAGTCGG CCTCAGCGGC TACAGCGCAA 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR003593--AAA+_ATPase
IPR003959--ATPase_AAA_core
IPR001357--BRCT_dom
IPR008921--DNA_pol3_clamp-load_cplx_C
IPR013725--DNA_replication_fac_RFC1_C
IPR027417--P-loop_NTPase
IPR012178--RFC1

PROSITE

PS50172--BRCT

Pfam

PF00004--AAA
PF00533--BRCT
PF08519--RFC1

SMART

SM00382--AAA
SM00292--BRCT

Gene Ontology

GO:0005663--C:DNA replication factor C complex
GO:0005524--F:ATP binding
GO:0003689--F:DNA clamp loader activity
GO:0006281--P:DNA repair
GO:0006260--P:DNA replication

KEGG

cme:CYME_CMR028C

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence