iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Psi-093020

Ensembl Protein ID

ENSPSIP00000011859.1

UniProt Accession

K7FUZ9; K7FUZ9_PELSI

Genbank Protein ID

ENSPSIP00000011859

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGCU01047927

Gene Name

PRPF4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000010713.1	ENSPSIT00000011916.1	ENSPSIP00000011859.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-38	129.5	452	490
UBD/Beta-Prp	1.90e-58	198.0	374	566

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH  ++++++f ++  ++++Gs+D+t+kvWDlr+ +++ 
   Q: 452  GHLKEIYGINFsPNgYHIATGSGDNTCKVWDLRQRRCVY 490
           7999********77799*****************99985 PP

UBD/Beta-Prp

   S: 14   tcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsf 102
           + v ++p++++l t+++d++ ++wd++ +  +   +gh+++v+++ f++dg++  tg+ D++ +vwdl+tg c++ l+gh ++++ ++f
   Q: 374  SRVMWHPSGRFLGTTCYDHSWRLWDLQAQEEILHQEGHSKGVYDIAFHSDGSLAGTGGMDAFGRVWDLRTGRCIMFLEGHLKEIYGINF 462
           55788************************************************************************************ PP
   S: 103  spsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfds 190
           sp+g+++++Gs d+t +vwdl+++ c++ t   h+ +v++v++ p+  n l +G++D+t ++W  +  + l+tl g h+++v  l+++ 
   Q: 463  SPNGYHIATGSGDNTCKVWDLRQRRCVY-TIPAHQNLVTGVKFEPSHgNFLLTGAYDNTAKIWTHPGWSPLKTLAG-HEGKVMGLDISC 549
           ****************************.999******************************************99.************ PP
   S: 191  ngkelvsgsldgtvklw 207
           +g+ ++++s+d+t klw
   Q: 550  DGQLIATCSYDRTFKLW 566
           ***************** PP

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

MPLALGGVFP RRLFCPPLRL VHVYRWALST RAVSCARSTV RAQNLVCCLH CARVLVQGTK 60
NKLSEDSDAP LPKRSHIFYG SLEEKERERL AKGESGLLGR ERVRAAIEAG NINITSGEVF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCCCTGG CACTGGGAGG AGTCTTCCCG CGGAGGCTCT TTTGCCCACC CCTGCGGTTG 60
GTGCATGTAT ACAGATGGGC TCTGTCTACA CGGGCAGTTT CTTGTGCAAG ATCAACTGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR014906--PRP4-like
IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08799--PRP4
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00500--SFM
SM00320--WD40

Gene Ontology

GO:0015030--C:Cajal body
GO:0016607--C:nuclear speck
GO:0071001--C:U4/U6 snRNP

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000771	Aegilops tauschii	43.46	2.00e-99	355.00
IUUC-Aml-001737	Ailuropoda melanoleuca	91.88	0.00e+00	946.00
IUUC-Atr-002828	Amborella trichopoda	43.11	3.00e-103	368.00
IUUC-Apl-003723	Anas platyrhynchos	92.20	0.00e+00	968.00
IUUC-Aca-004972	Anolis carolinensis	89.87	0.00e+00	907.00
IUUC-Aly-006531	Arabidopsis lyrata	42.02	3.00e-93	335.00
IUUC-Ath-007367	Arabidopsis thaliana	42.57	5.00e-107	381.00
IUUC-Ago-007893	Ashbya gossypii	33.55	2.00e-58	219.00
IUUC-Acl-008236	Aspergillus clavatus	38.25	6.00e-90	324.00
IUUC-Afl-008522	Aspergillus flavus	40.21	2.00e-98	352.00
IUUC-Afu-008904	Aspergillus fumigatus	38.52	6.00e-95	340.00
IUUC-Ani-009198	Aspergillus nidulans	39.38	3.00e-98	352.00
IUUC-Ang-009662	Aspergillus niger	42.07	4.00e-100	358.00
IUUC-Aor-009881	Aspergillus oryzae	40.21	1.00e-98	353.00
IUUC-Ate-010333	Aspergillus terreus	37.81	5.00e-88	318.00
IUUC-Ame-011697	Astyanax mexicanus	79.29	0.00e+00	818.00
IUUC-Bgr-012254	Blumeria graminis	38.76	3.00e-99	355.00
IUUC-Bta-012615	Bos taurus	91.02	0.00e+00	919.00
IUUC-Bci-013720	Botrytis cinerea	39.27	7.00e-101	360.00
IUUC-Bdi-014302	Brachypodium distachyon	44.29	3.00e-107	381.00
IUUC-Bol-015594	Brassica oleracea	42.36	2.00e-97	349.00
IUUC-Bra-017465	Brassica rapa	42.14	2.00e-97	349.00
IUUC-Cel-018632	Caenorhabditis elegans	44.94	1.00e-110	393.00
IUUC-Cja-019747	Callithrix jacchus	91.05	0.00e+00	957.00
IUUC-Cfa-020288	Canis familiaris	91.88	0.00e+00	947.00
IUUC-Cpo-021440	Cavia porcellus	89.92	0.00e+00	928.00
IUUC-Cre-022716	Chlamydomonas reinhardtii	47.06	1.00e-86	312.00
IUUC-Csa-023139	Chlorocebus sabaeus	94.28	0.00e+00	669.00
IUUC-Cho-024481	Choloepus hoffmanni	90.71	0.00e+00	827.00
IUUC-Cin-025106	Ciona intestinalis	59.11	2.00e-175	608.00
IUUC-Csv-026087	Ciona savignyi	59.11	3.00e-175	607.00
IUUC-Cgl-026538	Colletotrichum gloeosporioides	37.28	8.00e-93	334.00
IUUC-Cne-026793	Cryptococcus neoformans	38.78	1.00e-106	379.00
IUUC-Dre-028723	Danio rerio	78.70	0.00e+00	797.00
IUUC-Dno-029299	Dasypus novemcinctus	91.88	0.00e+00	947.00
IUUC-Dor-030345	Dipodomys ordii	64.89	2.00e-82	299.00
IUUC-Dse-031562	Dothistroma septosporum	37.37	2.00e-90	326.00
IUUC-Dme-031783	Drosophila melanogaster	57.33	3.00e-141	494.00
IUUC-Ete-032669	Echinops telfairi	89.90	0.00e+00	942.00
IUUC-Eca-033566	Equus caballus	91.88	0.00e+00	946.00
IUUC-Eeu-034524	Erinaceus europaeus	93.72	3.00e-140	491.00
IUUC-Fca-036215	Felis catus	91.88	0.00e+00	947.00
IUUC-Fal-037018	Ficedula albicollis	92.31	0.00e+00	810.00
IUUC-Fox-037936	Fusarium oxysporum	36.58	5.00e-86	311.00
IUUC-Fso-038366	Fusarium solani	37.23	6.00e-91	327.00
IUUC-Gmo-038966	Gadus morhua	66.39	2.00e-140	491.00
IUUC-Ggr-039942	Gaeumannomyces graminis	36.95	1.00e-84	306.00
IUUC-Gga-040797	Gallus gallus	92.46	0.00e+00	955.00
IUUC-Gac-042598	Gasterosteus aculeatus	67.71	0.00e+00	660.00
IUUC-Gma-044220	Glycine max	43.78	8.00e-101	360.00
IUUC-Ggo-044682	Gorilla gorilla	91.50	0.00e+00	939.00
IUUC-Hsa-045804	Homo sapiens	90.86	0.00e+00	954.00
IUUC-Hvu-047567	Hordeum vulgare	43.95	2.00e-94	339.00
IUUC-Itr-047882	Ictidomys tridecemlineatus	90.15	0.00e+00	951.00
IUUC-Kpa-049369	Komagataella pastoris	32.61	3.00e-60	225.00
IUUC-Lch-050074	Latimeria chalumnae	79.38	0.00e+00	825.00
IUUC-Lpe-051333	Leersia perrieri	43.09	4.00e-98	351.00
IUUC-Loc-052164	Lepisosteus oculatus	80.87	0.00e+00	837.00
IUUC-Lma-053088	Leptosphaeria maculans	37.30	1.00e-85	310.00
IUUC-Laf-053460	Loxodonta africana	91.23	0.00e+00	951.00
IUUC-Mcc-055859	Macaca mulatta	91.88	0.00e+00	947.00
IUUC-Meu-056134	Macropus eugenii	90.41	0.00e+00	947.00
IUUC-Mor-057251	Magnaporthe oryzae	37.39	2.00e-87	315.00
IUUC-Mpo-057375	Magnaporthe poae	39.60	3.00e-53	201.00
IUUC-Mtr-057656	Medicago truncatula	42.29	7.00e-91	327.00
IUUC-Mla-059145	Melampsora laricipopulina	40.88	2.00e-102	365.00
IUUC-Mga-059855	Meleagris gallopavo	91.96	0.00e+00	956.00
IUUC-Mvi-060372	Microbotryum violaceum	42.75	6.00e-95	341.00
IUUC-Mmr-060826	Microcebus murinus	91.09	0.00e+00	943.00
IUUC-Mdo-062748	Monodelphis domestica	91.29	0.00e+00	946.00
IUUC-Mmu-063351	Mus musculus	91.49	0.00e+00	943.00
IUUC-Mac-064846	Musa acuminata	43.78	7.00e-95	340.00
IUUC-Mpu-066006	Mustela putorius furo	91.88	0.00e+00	947.00
IUUC-Mlu-067398	Myotis lucifugus	91.49	0.00e+00	943.00
IUUC-Nfi-068399	Neosartorya fischeri	38.52	2.00e-100	359.00
IUUC-Ncr-068711	Neurospora crassa	37.08	3.00e-93	335.00
IUUC-Nle-069982	Nomascus leucogenys	91.05	0.00e+00	957.00
IUUC-Opr-070596	Ochotona princeps	90.86	0.00e+00	956.00
IUUC-Ont-072374	Oreochromis niloticus	75.93	0.00e+00	752.00
IUUC-Oan-073166	Ornithorhynchus anatinus	91.56	0.00e+00	737.00
IUUC-Ocu-074371	Oryctolagus cuniculus	92.08	0.00e+00	948.00
IUUC-Oba-075083	Oryza barthii	42.73	3.00e-101	362.00
IUUC-Obr-076405	Oryza brachyantha	42.86	9.00e-98	350.00
IUUC-Ogl-077683	Oryza glaberrima	42.73	4.00e-101	361.00
IUUC-Ogu-078486	Oryza glumaepatula	42.95	8.00e-101	360.00
IUUC-Oin-079679	Oryza indica	42.92	4.00e-104	371.00
IUUC-Olo-080243	Oryza longistaminata	45.10	3.00e-89	321.00
IUUC-Ome-081230	Oryza meridionalis	42.73	6.00e-104	370.00
IUUC-Oni-082961	Oryza nivara	42.73	6.00e-104	370.00
IUUC-Opu-083189	Oryza punctata	42.11	9.00e-101	360.00
IUUC-Oru-084353	Oryza rufipogon	42.99	8.00e-102	363.00
IUUC-Osa-085458	Oryza sativa	42.73	6.00e-104	370.00
IUUC-Ola-086940	Oryzias latipes	74.61	0.00e+00	754.00
IUUC-Olu-087580	Ostreococcus lucimarinus	34.98	1.00e-64	240.00
IUUC-Oga-088703	Otolemur garnettii	86.10	0.00e+00	902.00
IUUC-Oar-089829	Ovis aries	87.92	0.00e+00	922.00
IUUC-Ptr-090838	Pan troglodytes	90.86	0.00e+00	954.00
IUUC-Pan-092261	Papio anubis	90.68	0.00e+00	949.00
IUUC-Pno-094858	Phaeosphaeria nodorum	37.15	2.00e-80	292.00
IUUC-Ppa-095531	Physcomitrella patens	46.14	4.00e-117	414.00
IUUC-Pfo-096812	Poecilia formosa	69.47	0.00e+00	665.00
IUUC-Pab-097805	Pongo abelii	81.45	0.00e+00	820.00
IUUC-Pop-100051	Populus trichocarpa	44.05	2.00e-102	366.00
IUUC-Pca-100152	Procavia capensis	91.05	0.00e+00	950.00
IUUC-Ppe-101244	Prunus persica	45.77	8.00e-106	377.00
IUUC-Pva-102529	Pteropus vampyrus	87.55	0.00e+00	907.00
IUUC-Pgr-103550	Puccinia graminis	37.08	2.00e-101	362.00
IUUC-Ptt-103951	Puccinia triticina	36.68	1.00e-72	267.00
IUUC-Pte-104151	Pyrenophora teres	37.58	2.00e-81	296.00
IUUC-Pyt-104571	Pyrenophora triticirepentis	38.01	2.00e-82	299.00
IUUC-Rno-105747	Rattus norvegicus	91.29	0.00e+00	942.00
IUUC-Sce-106418	Saccharomyces cerevisiae	33.85	5.00e-70	258.00
IUUC-Sha-107334	Sarcophilus harrisii	91.49	0.00e+00	947.00
IUUC-Sja-107794	Schizosaccharomyces japonicus	34.96	2.00e-71	263.00
IUUC-Spo-108189	Schizosaccharomyces pombe	37.89	5.00e-82	298.00
IUUC-Ssl-108550	Sclerotinia sclerotiorum	38.41	7.00e-99	353.00
IUUC-Smo-108924	Selaginella moellendorffii	46.34	1.00e-111	396.00
IUUC-Sit-110102	Setaria italica	43.67	6.00e-103	367.00
IUUC-Sly-111668	Solanum lycopersicum	44.84	7.00e-106	377.00
IUUC-Stu-111928	Solanum tuberosum	44.70	2.00e-105	375.00
IUUC-Sar-113266	Sorex araneus	80.40	0.00e+00	776.00
IUUC-Sbi-114134	Sorghum bicolor	42.99	1.00e-102	366.00
IUUC-Sre-115114	Sporisorium reilianum	41.02	1.00e-105	376.00
IUUC-Ssc-115443	Sus scrofa	91.88	0.00e+00	945.00
IUUC-Tgu-117157	Taeniopygia guttata	92.29	0.00e+00	907.00
IUUC-Tru-118587	Takifugu rubripes	74.46	0.00e+00	737.00
IUUC-Tsy-119157	Tarsius syrichta	93.59	0.00e+00	746.00
IUUC-Tni-120427	Tetraodon nigroviridis	76.18	0.00e+00	749.00
IUUC-Tca-121368	Theobroma cacao	43.81	1.00e-104	373.00
IUUC-Tre-122074	Trichoderma reesei	37.45	3.00e-89	322.00
IUUC-Tvi-122349	Trichoderma virens	36.52	1.00e-87	316.00
IUUC-Tae-125651	Triticum aestivum	43.18	1.00e-101	363.00
IUUC-Tur-126532	Triticum urartu	42.56	2.00e-87	315.00
IUUC-Tme-126951	Tuber melanosporum	40.42	1.00e-102	366.00
IUUC-Tbe-128136	Tupaia belangeri	82.68	0.00e+00	847.00
IUUC-Ttr-129169	Tursiops truncatus	92.95	1.00e-157	549.00
IUUC-Uma-129399	Ustilago maydis	42.61	8.00e-104	370.00
IUUC-Vda-129842	Verticillium dahliae	37.34	5.00e-94	338.00
IUUC-Vpa-130440	Vicugna pacos	90.86	0.00e+00	954.00
IUUC-Vvi-131075	Vitis vinifera	46.49	8.00e-107	380.00
IUUC-Xtr-132713	Xenopus tropicalis	50.29	6.00e-110	390.00
IUUC-Xma-133002	Xiphophorus maculatus	80.78	2.00e-174	604.00
IUUC-Yli-134569	Yarrowia lipolytica	35.90	2.00e-78	286.00
IUUC-Zma-135799	Zea mays	41.33	6.00e-100	357.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence