iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Fox-037973

Ensembl Protein ID

FOXG_10250P0

UniProt Accession

A0A0D2Y1V7; A0A0D2Y1V7_FUSO4

Genbank Protein ID

KNB09736.1

Protein Name

Ribosome biogenesis protein ERB1; Eukaryotic ribosome biogenesis protein 1

Genbank Nucleotide ID

DS231708

Gene Name

ERB1; FOXG_10250

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
FOXG_10250	FOXG_10250T0	FOXG_10250P0

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-15	56.5	416	447

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gH ++v++++f +d  +++sG+dDgt++vW l
   Q: 416  GHDGRVRSVSFsPDgEFVASGGDDGTVRVWAL 447
           8***********999***************75 PP

Organism

Fusarium oxysporum

Functional Description
(View)

Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.

Protein Sequence
(Fasta)

MAPTLASRKR KVLAEPAPVD DELAGVELDG VLSQSEDGSD FEESDLEDGL DGQDTNEHDG 60
DDDDEDDDDE DDDAYSEDAS SDVDDSFTAP PPLDIDNSEP NYRVVKDANG GERYEYAEVD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCACCAA CATTGGCATC ACGCAAGCGA AAGGTTCTCG CGGAACCTGC TCCCGTTGAT 60
GACGAGCTCG CCGGCGTGGA ATTGGACGGA GTTTTGTCAC AGAGCGAAGA TGGATCTGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08145--BOP1NT
PF00400--WD40

SMART

SM01035--BOP1NT
SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0005654--C:nucleoplasm
GO:0030687--C:preribosome, large subunit precursor
GO:0043021--F:ribonucleoprotein complex binding
GO:0000466--P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000463--P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001158	Aegilops tauschii	39.34	2.00e-113	401.00
IUUC-Aml-001507	Ailuropoda melanoleuca	40.60	7.00e-134	469.00
IUUC-Atr-003141	Amborella trichopoda	36.08	2.00e-70	258.00
IUUC-Apl-003545	Anas platyrhynchos	40.72	7.00e-124	435.00
IUUC-Aly-005649	Arabidopsis lyrata	42.20	3.00e-139	487.00
IUUC-Ath-007625	Arabidopsis thaliana	42.20	5.00e-133	466.00
IUUC-Ago-007958	Ashbya gossypii	51.56	0.00e+00	718.00
IUUC-Acl-008344	Aspergillus clavatus	63.66	0.00e+00	828.00
IUUC-Afl-008616	Aspergillus flavus	64.22	0.00e+00	860.00
IUUC-Afu-009083	Aspergillus fumigatus	64.40	0.00e+00	818.00
IUUC-Ani-009365	Aspergillus nidulans	63.52	0.00e+00	845.00
IUUC-Ang-009796	Aspergillus niger	63.34	0.00e+00	840.00
IUUC-Aor-010015	Aspergillus oryzae	64.22	0.00e+00	860.00
IUUC-Ate-010537	Aspergillus terreus	62.90	0.00e+00	858.00
IUUC-Ame-011767	Astyanax mexicanus	47.15	4.00e-70	256.00
IUUC-Bgr-012286	Blumeria graminis	70.64	0.00e+00	977.00
IUUC-Bta-013569	Bos taurus	44.08	1.00e-148	518.00
IUUC-Bci-013820	Botrytis cinerea	74.26	0.00e+00	980.00
IUUC-Bdi-014477	Brachypodium distachyon	41.98	1.00e-140	491.00
IUUC-Bol-016099	Brassica oleracea	42.23	1.00e-140	491.00
IUUC-Bra-017174	Brassica rapa	42.07	5.00e-140	490.00
IUUC-Cel-018201	Caenorhabditis elegans	37.25	9.00e-113	399.00
IUUC-Cja-019009	Callithrix jacchus	42.57	2.00e-90	324.00
IUUC-Cfa-020173	Canis familiaris	40.31	3.00e-133	467.00
IUUC-Cpo-021796	Cavia porcellus	43.76	3.00e-148	517.00
IUUC-Cre-022650	Chlamydomonas reinhardtii	40.80	4.00e-127	446.00
IUUC-Csa-023440	Chlorocebus sabaeus	43.13	9.00e-153	531.00
IUUC-Cin-025782	Ciona intestinalis	42.33	9.00e-151	525.00
IUUC-Csv-026352	Ciona savignyi	41.90	2.00e-146	510.00
IUUC-Cgl-026393	Colletotrichum gloeosporioides	69.54	0.00e+00	925.00
IUUC-Cne-027004	Cryptococcus neoformans	48.42	0.00e+00	644.00
IUUC-Cme-027242	Cyanidioschyzon merolae	35.33	3.00e-113	400.00
IUUC-Dre-028658	Danio rerio	44.27	3.00e-157	546.00
IUUC-Dno-028883	Dasypus novemcinctus	43.67	2.00e-150	524.00
IUUC-Dor-031031	Dipodomys ordii	43.57	1.00e-151	528.00
IUUC-Dse-031443	Dothistroma septosporum	61.20	0.00e+00	825.00
IUUC-Dme-031786	Drosophila melanogaster	42.41	3.00e-155	540.00
IUUC-Eca-033677	Equus caballus	44.08	8.00e-149	518.00
IUUC-Eeu-035310	Erinaceus europaeus	40.35	6.00e-111	392.00
IUUC-Fca-035888	Felis catus	43.13	7.00e-150	522.00
IUUC-Fal-037438	Ficedula albicollis	42.88	1.00e-123	435.00
IUUC-Fso-038187	Fusarium solani	89.15	0.00e+00	1311.00
IUUC-Gmo-039114	Gadus morhua	42.52	3.00e-142	496.00
IUUC-Ggr-039746	Gaeumannomyces graminis	68.97	0.00e+00	1031.00
IUUC-Gga-040631	Gallus gallus	41.60	7.00e-81	292.00
IUUC-Gac-042582	Gasterosteus aculeatus	43.19	6.00e-147	512.00
IUUC-Gma-044307	Glycine max	41.12	3.00e-142	497.00
IUUC-Ggo-045587	Gorilla gorilla	43.29	6.00e-153	532.00
IUUC-Hsa-046319	Homo sapiens	43.13	1.00e-152	531.00
IUUC-Hvu-047526	Hordeum vulgare	40.97	1.00e-132	464.00
IUUC-Itr-048683	Ictidomys tridecemlineatus	43.92	2.00e-149	520.00
IUUC-Kpa-049221	Komagataella pastoris	48.45	0.00e+00	649.00
IUUC-Lch-049640	Latimeria chalumnae	43.72	7.00e-164	568.00
IUUC-Lpe-051135	Leersia perrieri	39.81	3.00e-119	420.00
IUUC-Loc-051930	Lepisosteus oculatus	44.39	9.00e-162	561.00
IUUC-Lma-053290	Leptosphaeria maculans	66.71	0.00e+00	906.00
IUUC-Laf-053903	Loxodonta africana	40.54	3.00e-128	450.00
IUUC-Mcc-055471	Macaca mulatta	42.97	8.00e-153	532.00
IUUC-Meu-056190	Macropus eugenii	42.97	5.00e-148	516.00
IUUC-Mor-057135	Magnaporthe oryzae	70.09	0.00e+00	1003.00
IUUC-Mpo-057475	Magnaporthe poae	74.52	0.00e+00	978.00
IUUC-Mtr-058689	Medicago truncatula	39.24	3.00e-125	440.00
IUUC-Mla-059149	Melampsora laricipopulina	47.83	3.00e-176	610.00
IUUC-Mga-059645	Meleagris gallopavo	35.16	6.00e-44	168.00
IUUC-Mvi-060485	Microbotryum violaceum	45.68	9.00e-155	540.00
IUUC-Mmr-061674	Microcebus murinus	43.30	3.00e-145	506.00
IUUC-Mdo-062973	Monodelphis domestica	43.13	6.00e-154	536.00
IUUC-Mmu-064180	Mus musculus	43.44	3.00e-151	527.00
IUUC-Mac-064535	Musa acuminata	34.00	7.00e-75	273.00
IUUC-Mpu-066406	Mustela putorius furo	43.44	2.00e-153	534.00
IUUC-Mlu-067795	Myotis lucifugus	43.76	5.00e-141	493.00
IUUC-Nfi-068516	Neosartorya fischeri	63.96	0.00e+00	789.00
IUUC-Ncr-068767	Neurospora crassa	75.56	0.00e+00	972.00
IUUC-Opr-071084	Ochotona princeps	43.20	5.00e-61	226.00
IUUC-Ont-071614	Oreochromis niloticus	44.08	6.00e-158	549.00
IUUC-Oba-075980	Oryza barthii	39.84	1.00e-119	421.00
IUUC-Obr-076799	Oryza brachyantha	41.86	6.00e-135	473.00
IUUC-Ogl-077134	Oryza glaberrima	42.34	8.00e-130	455.00
IUUC-Ogu-078655	Oryza glumaepatula	40.13	3.00e-121	427.00
IUUC-Oin-079654	Oryza indica	42.34	1.00e-129	455.00
IUUC-Olo-080706	Oryza longistaminata	40.60	1.00e-119	422.00
IUUC-Ome-081716	Oryza meridionalis	35.89	9.00e-67	246.00
IUUC-Oni-082508	Oryza nivara	39.18	7.00e-115	405.00
IUUC-Opu-083707	Oryza punctata	39.65	4.00e-118	417.00
IUUC-Oru-084453	Oryza rufipogon	40.60	1.00e-119	422.00
IUUC-Osa-085811	Oryza sativa	42.18	2.00e-129	454.00
IUUC-Ola-087361	Oryzias latipes	44.50	4.00e-158	550.00
IUUC-Oga-088015	Otolemur garnettii	42.97	6.00e-153	532.00
IUUC-Oar-090058	Ovis aries	52.10	1.00e-50	192.00
IUUC-Ptr-090631	Pan troglodytes	43.63	4.00e-66	243.00
IUUC-Pan-092306	Papio anubis	43.06	1.00e-151	528.00
IUUC-Pma-094622	Petromyzon marinus	43.49	4.00e-159	552.00
IUUC-Pno-094794	Phaeosphaeria nodorum	62.22	0.00e+00	851.00
IUUC-Ppa-095528	Physcomitrella patens	35.64	4.00e-75	273.00
IUUC-Pfo-096682	Poecilia formosa	42.42	1.00e-157	548.00
IUUC-Pab-097939	Pongo abelii	43.28	6.00e-138	482.00
IUUC-Pop-099043	Populus trichocarpa	42.48	5.00e-127	446.00
IUUC-Pca-100333	Procavia capensis	43.29	9.00e-151	525.00
IUUC-Ppe-102078	Prunus persica	41.67	3.00e-134	470.00
IUUC-Pgr-103525	Puccinia graminis	45.30	2.00e-162	564.00
IUUC-Ptt-103929	Puccinia triticina	46.34	4.00e-157	546.00
IUUC-Pte-104029	Pyrenophora teres	67.07	0.00e+00	939.00
IUUC-Pyt-104446	Pyrenophora triticirepentis	66.57	0.00e+00	938.00
IUUC-Rno-105248	Rattus norvegicus	44.71	2.00e-152	530.00
IUUC-Sce-106381	Saccharomyces cerevisiae	51.75	0.00e+00	720.00
IUUC-Sha-106519	Sarcophilus harrisii	43.04	6.00e-155	538.00
IUUC-Sja-107908	Schizosaccharomyces japonicus	45.81	1.00e-162	564.00
IUUC-Spo-108071	Schizosaccharomyces pombe	45.69	6.00e-157	546.00
IUUC-Smo-109604	Selaginella moellendorffii	41.10	1.00e-121	428.00
IUUC-Sit-109742	Setaria italica	41.98	2.00e-138	484.00
IUUC-Sly-110970	Solanum lycopersicum	42.74	4.00e-68	250.00
IUUC-Stu-112593	Solanum tuberosum	42.07	8.00e-136	475.00
IUUC-Sar-113123	Sorex araneus	48.09	2.00e-60	224.00
IUUC-Sbi-113945	Sorghum bicolor	41.98	3.00e-136	477.00
IUUC-Sre-115188	Sporisorium reilianum	43.79	2.00e-160	557.00
IUUC-Ssc-115352	Sus scrofa	43.64	9.00e-151	525.00
IUUC-Tru-117685	Takifugu rubripes	45.17	3.00e-163	566.00
IUUC-Tni-119982	Tetraodon nigroviridis	43.44	3.00e-154	536.00
IUUC-Tca-121664	Theobroma cacao	41.20	8.00e-136	475.00
IUUC-Tre-122229	Trichoderma reesei	81.63	0.00e+00	1039.00
IUUC-Tvi-122576	Trichoderma virens	84.03	0.00e+00	1064.00
IUUC-Tae-124110	Triticum aestivum	41.51	2.00e-127	447.00
IUUC-Tur-126781	Triticum urartu	39.02	3.00e-109	387.00
IUUC-Tme-127080	Tuber melanosporum	63.08	0.00e+00	858.00
IUUC-Ttr-128514	Tursiops truncatus	40.18	4.00e-92	330.00
IUUC-Uma-129556	Ustilago maydis	43.27	7.00e-155	539.00
IUUC-Vda-129715	Verticillium dahliae	81.70	0.00e+00	1098.00
IUUC-Vvi-131211	Vitis vinifera	40.70	4.00e-127	446.00
IUUC-Xma-133883	Xiphophorus maculatus	42.26	1.00e-152	531.00
IUUC-Yli-134438	Yarrowia lipolytica	51.45	0.00e+00	666.00
IUUC-Zma-135341	Zea mays	37.95	3.00e-125	440.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence