iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098843

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitin-conjugating enzyme family protein

Genbank Nucleotide ID

CM000342

Gene Name

POPTRDRAFT_716764; POPTR_0006s25760g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0006s25760	POPTR_0006s25760.1	POPTR_0006s25760.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	9.40e-42	143.2	7	143

Active Site

Position(s)	Description	Evidence
90	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    Rlkkelkelekdpp..egisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyen.GkvClsilke 88
           Rl ke+ke++++++  + i++ ++d+ ++++w +li Gp++tp+eggvF+l +++pe+YP++PP+v+fltkifhPnv+ + G++Cl+ilk 
   Q: 7    RLLKEYKEVQREKVadPDIQLVCDDS-NIFKWTALIKGPSETPFEGGVFQLAFSVPEQYPLQPPQVRFLTKIFHPNVHFKtGEICLDILK- 95
           899******99998446677777777.9**************************************************888********9. PP
   S: 89   eekWspalsvesvllsiqsllaepnpesplneeaaellkknre.eykkk 136
            ++Wspa++++sv+ +i++l+a+p+p+spln ++ +ll++ +   y+++
   Q: 96   -NAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVrGYQSM 143
           .*********************************999987654256665 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MQASRARLLK EYKEVQREKV ADPDIQLVCD DSNIFKWTAL IKGPSETPFE GGVFQLAFSV 60
PEQYPLQPPQ VRFLTKIFHP NVHFKTGEIC LDILKNAWSP AWTLQSVCRA IIALMAHPEP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGTCATCTGA CAATCCTCAT CCGTTGATAT TCTCATCAAC GGTGAAGATA GTCAGATACC 60
AAACCGCTTC AAAAAGAAAA ATCTGTAAAC CGCGATCCGC ATACCAAAAA CTCCTGCTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005524--F:ATP binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0031625--F:ubiquitin protein ligase binding

KEGG

pop:POPTR_0006s25760g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000555	Aegilops tauschii	92.90	2.00e-86	310.00
IUUC-Atr-002740	Amborella trichopoda	92.99	2.00e-87	313.00
IUUC-Aly-006113	Arabidopsis lyrata	94.90	2.00e-88	317.00
IUUC-Ath-007486	Arabidopsis thaliana	94.27	4.00e-88	315.00
IUUC-Acl-008222	Aspergillus clavatus	40.00	4.00e-30	123.00
IUUC-Afl-008430	Aspergillus flavus	42.57	2.00e-32	131.00
IUUC-Afu-009088	Aspergillus fumigatus	40.79	3.00e-32	130.00
IUUC-Ani-009452	Aspergillus nidulans	43.71	1.00e-33	135.00
IUUC-Aor-010187	Aspergillus oryzae	42.57	2.00e-32	131.00
IUUC-Bdi-014648	Brachypodium distachyon	94.23	9.00e-88	314.00
IUUC-Bol-016138	Brassica oleracea	93.63	5.00e-87	312.00
IUUC-Bra-017259	Brassica rapa	94.16	3.00e-86	309.00
IUUC-Cre-022583	Chlamydomonas reinhardtii	70.27	5.00e-64	235.00
IUUC-Cme-027300	Cyanidioschyzon merolae	59.68	4.00e-38	149.00
IUUC-Gma-043907	Glycine max	97.45	2.00e-90	323.00
IUUC-Kpa-049387	Komagataella pastoris	33.51	6.00e-29	119.00
IUUC-Lpe-051399	Leersia perrieri	94.70	9.00e-86	308.00
IUUC-Lma-053321	Leptosphaeria maculans	45.26	1.00e-31	128.00
IUUC-Mtr-058439	Medicago truncatula	96.18	2.00e-89	320.00
IUUC-Mvi-060238	Microbotryum violaceum	55.56	7.00e-39	152.00
IUUC-Mac-064623	Musa acuminata	94.27	1.00e-87	315.00
IUUC-Nfi-068258	Neosartorya fischeri	41.45	4.00e-33	133.00
IUUC-Oba-075919	Oryza barthii	94.84	1.00e-86	311.00
IUUC-Obr-076554	Oryza brachyantha	95.54	2.00e-89	320.00
IUUC-Ogu-078897	Oryza glumaepatula	95.89	7.00e-83	299.00
IUUC-Oni-082318	Oryza nivara	78.21	6.00e-78	283.00
IUUC-Opu-083715	Oryza punctata	95.39	2.00e-86	310.00
IUUC-Oru-084851	Oryza rufipogon	95.48	2.00e-87	314.00
IUUC-Osa-085417	Oryza sativa	95.54	2.00e-89	320.00
IUUC-Pno-095034	Phaeosphaeria nodorum	45.89	8.00e-29	119.00
IUUC-Ppe-101953	Prunus persica	96.18	1.00e-89	320.00
IUUC-Pte-104310	Pyrenophora teres	51.72	3.00e-32	130.00
IUUC-Pyt-104497	Pyrenophora triticirepentis	44.76	5.00e-32	129.00
IUUC-Sit-110558	Setaria italica	95.54	2.00e-89	320.00
IUUC-Sly-111535	Solanum lycopersicum	94.90	4.00e-89	319.00
IUUC-Stu-112232	Solanum tuberosum	94.90	4.00e-89	319.00
IUUC-Sbi-113774	Sorghum bicolor	94.27	9.00e-89	317.00
IUUC-Sre-114982	Sporisorium reilianum	49.08	1.00e-43	168.00
IUUC-Tca-121736	Theobroma cacao	96.79	9.00e-90	321.00
IUUC-Tvi-122646	Trichoderma virens	36.91	3.00e-30	123.00
IUUC-Tae-124241	Triticum aestivum	93.59	2.00e-87	313.00
IUUC-Tur-126566	Triticum urartu	92.90	4.00e-86	310.00
IUUC-Tme-127194	Tuber melanosporum	39.86	1.00e-32	131.00
IUUC-Uma-129494	Ustilago maydis	49.70	1.00e-38	151.00
IUUC-Vvi-131056	Vitis vinifera	96.82	2.00e-90	323.00
IUUC-Yli-134417	Yarrowia lipolytica	46.10	5.00e-41	159.00
IUUC-Zma-135372	Zea mays	94.27	9.00e-89	317.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence