iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007031

UUCD1 version

UUC-ArT-01272

Ensembl Protein ID

AT4G12210.1

UniProt Accession

Q9STJ0; Q9STJ0_ARATH

Genbank Protein ID

AEE83104.1; CAB45968.1; CAB78264.1

Protein Name

Putative uncharacterized protein AT4g12210; Putative uncharacterized protein T4C9.50; RING/U-box superfamily protein

Genbank Nucleotide ID

CP002687; AL080318; AL161533

Gene Name

At4g12210; T4C9.50; T4C9_50

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT4G12210	AT4G12210.1	AT4G12210.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.90e-07	31.1	153	197

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf......kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCle +      +d +  + C Hvfh  Cl  w       +++ +CPlCr
   Q: 153  CSICLENLvsgpkpSD-LTRMTCSHVFHNPCLLEW------FMRKNTCPLCR 197
           ********66655444.33466*************......99999*****8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MNSRKVEFRF TNLQRKLSSP SHANSVIVEI DTKSEEIFVN QTTDHQTRRS TPATLSCLDT 60
INLSSSSHDH IRSLLRTRFA SHHWLCDDLA SEISTAAIDL GFGRNGFTIT VVVTVTYRTV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAATTCTC GCAAAGTGGA ATTTCGCTTC ACCAATCTTC AAAGGAAACT CTCTTCTCCA 60
TCACATGCAA ACTCAGTCAT CGTTGAGATC GATACCAAAT CTGAAGAGAT CTTTGTAAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

ath:AT4G12210

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Pno-095103	Phaeosphaeria nodorum	39.68	6.00e-09	52.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence