iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111827

Ensembl Protein ID

Solyc12g008480.1.1

UniProt Accession

K4DBT6; K4DBT6_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc12g008480.1	Solyc12g008480.1.1	Solyc12g008480.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.10e-10	40.8	270	311

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iC+e++ ++  ++++pC Hvfh+dC+ kw        +  +CP+Cr
   Q: 270  CVICFEELGKEgsVMCTPCSHVFHEDCIAKW------LANGNSCPICR 311
           ********55556888***************......999*******8 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

METMFYHSLP SSDACVVFSQ IETPKEELNI DKDSNISSPL PLLSIRFHLR KVELCWYKPL 60
HEPQQFQYYS PMFVNSLHLE YNPSIYASYD LFYNALRENM ENLGEEFEDN YRSDIIRYII 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAACTA TGTTCTATCA CAGTCTTCCC TCCTCAGACG CTTGCGTAGT ATTTAGTCAA 60
ATCGAAACAC CAAAAGAAGA ATTAAACATT GATAAAGATA GCAATATTTC TTCTCCTTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING
SM00744--RINGv

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011513	Astyanax mexicanus	32.67	2.00e-10	60.50
IUUC-Oin-079213	Oryza indica	48.94	8.00e-10	56.60
IUUC-Pno-095103	Phaeosphaeria nodorum	37.70	6.00e-08	49.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence