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Tag Content
UUCD2 ID IUUC-Zma-135865
UUCD1 version UUC-ZeM-00731
Ensembl Protein ID Zm00001d036161_T001
UniProt Accession A0A1D6LKZ7; A0A1D6LKZ7_MAIZE
Genbank Protein ID AQK80384.1
Protein Name Coatomer subunit beta'
Genbank Nucleotide ID CM000782
Gene Name ZEAMMB73_Zm00001d036161
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Zm00001d036161 Zm00001d036161_T003 Zm00001d036161_T003
Zm00001d036161 Zm00001d036161_T016 Zm00001d036161_T016
Zm00001d036161 Zm00001d036161_T001 Zm00001d036161_T001
Zm00001d036161 Zm00001d036161_T030 Zm00001d036161_T030
Zm00001d036161 Zm00001d036161_T018 Zm00001d036161_T018
Zm00001d036161 Zm00001d036161_T029 Zm00001d036161_T029
Zm00001d036161 Zm00001d036161_T005 Zm00001d036161_T005
Zm00001d036161 Zm00001d036161_T010 Zm00001d036161_T010
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 6.90e-32 110.1 183 224
UBD/Beta-Prp 3.00e-67 228.9 10 288
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sd.tllvsGsdDgtikvWDlrtgvllks 38
    gH+ +v+c+++ d ++l++GsdD t kvWD+ t ++++
   Q: 183 GHQKGVNCVDYftgGDrPYLITGSDDSTAKVWDYQTKSCVQT 224
    8********966*9778*******************999986 PP
   


   UBD/Beta-Prp

   S: 5    lkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghe 94
    ++++++++++v+ +p +++++++ ++g++ +wd++ + +++s++ e +v++ kf++++++ v g++D++i+v++++t + v ++++h+
   Q: 10 KFAQRSERVKSVDLHPTEPWILSSLYSGSVCIWDYQAQAMVKSFEVSELPVRSAKFISRKQWVVAGADDMFIRVYNYNTMDKVKVFEAHT 99
    567788999********************************************************************************* PP
   S: 95 dsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsv 183
    d++++++++p+ +++s s+d i++wd+++g+ ++++gh++ v+ v+++p++ n ++s+slDrt ++W+l + + tl g h++ v
   Q: 100 DYIRCVAVHPTLPYVLSSSDDMLIKLWDWDKGWMCTQIFEGHSHYVMQVTFNPKDiNTFASASLDRTTKIWSLGSPDPNFTLDG-HQKGV 188
    *********************************9999**********************************************9.***** PP
   S: 184 ysls..fdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisva 271
    ++++ ++++l++gs+d+t k+wd+qt++cv+tl+ght n++ v f+p+ ++++gs+Dg++riW +++ l +tl++ ++v++v
   Q: 189 NCVDyfTGGDRPYLITGSDDSTAKVWDYQTKSCVQTLEGHTHNISAVCFHPELPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAVG 278
    ****7445566******************************************************************************9 PP
   S: 272 vlsfgdnvlvl 282
    +++ +++++
   Q: 279 YMKGSRRMV-I 288
    955554444.3 PP
   

Organism Zea mays
Functional Description
(View)

Functional Description



     The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
Protein Sequence
(Fasta)
MPLRLEIKRK FAQRSERVKS VDLHPTEPWI LSSLYSGSVC IWDYQAQAMV KSFEVSELPV 60
RSAKFISRKQ WVVAGADDMF IRVYNYNTMD KVKVFEAHTD YIRCVAVHPT LPYVLSSSDD 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Zma-135865|E3,WD_repeat;UBD,Beta-Prp|Zea mays
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GTCGCTCGCC GGTCCTGGCT CCGCGCCTGC GCCACCGGGT TCGCGTCGGA TTCGCTCCCT 60
CTTCGCCGCG CCCCACCACT CCATCGTCGC TGGGGGATCT CTAGGGTTTA GCGCAGTCGC 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Zma-135865|E3,WD_repeat;UBD,Beta-Prp|Zea mays
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0968--Cytoplasmic vesicle
KW-0931--ER-Golgi transport
KW-0333--Golgi apparatus
KW-0472--Membrane
KW-0653--Protein transport
KW-1185--Reference proteome
KW-0813--Transport
KW-0853--WD repeat

Interpro

IPR006692--Coatomer_WD-assoc_reg
IPR016453--COPB2
IPR003143--Cyt_cd1_C
IPR020472--G-protein_beta_WD-40_rep
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04053--Coatomer_WDAD
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030663--C:COPI-coated vesicle membrane
GO:0000139--C:Golgi membrane
GO:0030117--C:membrane coat
GO:0005198--F:structural molecule activity
GO:0006886--P:intracellular protein transport
GO:0016192--P:vesicle-mediated transport

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Oin-079211 Oryza indica 89.98 0.00e+00 1639.00
IUUC-Ome-081762 Oryza meridionalis 84.70 0.00e+00 1544.00
IUUC-Opu-083433 Oryza punctata 91.58 0.00e+00 1584.00
IUUC-Osa-086026 Oryza sativa 92.17 0.00e+00 1697.00
Created Date 25-Jun-2017

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