iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-049678

Ensembl Protein ID

ENSLACP00000002366.2

UniProt Accession

H2ZY95; H2ZY95_LATCH

Genbank Protein ID

ENSLACP00000002366

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01218296

Gene Name

wdr20a; WDR20

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000002115.2	ENSLACT00000002386.2	ENSLACP00000002366.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-12	47.6	271	300

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 7    tclaf.sd.tllvsGsdDgtikvWDlrtgv 34
            c+++ +d +++v+G+ D  + vW++ +++
   Q: 271  LCVCWsPDgKYIVTGGEDDLVTVWSFVDCR 300
           6*****999****************88776 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MLMFKMAAEG GGKEMNEIKT QFTTREGVYK LLTHSEYSRP NRVPFNSQGS NPVKVSFVNV 60
NDQSGNGDRI CFNVGRELYF YIYKGVRKAA DLSKPIDKRI YKGTQPTCHD FNHLTATAES 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TACGCATGCG CTGTGAGTTT GATCCGGGCT TGGGGCAGAA TGAATGCTAA TGTTCAAGAT 60
GGCGGCGGAG GGAGGAGGGA AGGAGATGAA CGAAATTAAA ACTCAGTTCA CCACCCGGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000844	Aegilops tauschii	33.11	1.00e-33	137.00
IUUC-Aml-001749	Ailuropoda melanoleuca	91.62	0.00e+00	1050.00
IUUC-Atr-002459	Amborella trichopoda	37.35	2.00e-55	210.00
IUUC-Apl-003710	Anas platyrhynchos	94.87	0.00e+00	975.00
IUUC-Aca-004914	Anolis carolinensis	94.06	0.00e+00	1094.00
IUUC-Aly-005833	Arabidopsis lyrata	36.59	1.00e-55	210.00
IUUC-Ath-006649	Arabidopsis thaliana	35.90	7.00e-56	211.00
IUUC-Acl-008348	Aspergillus clavatus	33.33	6.00e-57	214.00
IUUC-Ame-010700	Astyanax mexicanus	89.90	0.00e+00	1115.00
IUUC-Bta-013293	Bos taurus	92.13	0.00e+00	1012.00
IUUC-Bdi-014307	Brachypodium distachyon	36.49	9.00e-53	201.00
IUUC-Bol-015990	Brassica oleracea	36.59	8.00e-55	207.00
IUUC-Bra-017842	Brassica rapa	23.47	6.00e-15	75.50
IUUC-Cel-018407	Caenorhabditis elegans	38.72	9.00e-120	424.00
IUUC-Cja-019007	Callithrix jacchus	90.24	0.00e+00	1101.00
IUUC-Cfa-020697	Canis familiaris	92.31	0.00e+00	725.00
IUUC-Cpo-022464	Cavia porcellus	86.46	0.00e+00	937.00
IUUC-Csa-023594	Chlorocebus sabaeus	94.57	0.00e+00	1138.00
IUUC-Cho-024294	Choloepus hoffmanni	95.27	3.00e-171	594.00
IUUC-Cin-025617	Ciona intestinalis	50.45	2.00e-89	322.00
IUUC-Csv-026120	Ciona savignyi	51.55	2.00e-54	204.00
IUUC-Cgl-026394	Colletotrichum gloeosporioides	32.00	7.00e-54	204.00
IUUC-Cne-026940	Cryptococcus neoformans	27.70	1.00e-30	128.00
IUUC-Cme-027228	Cyanidioschyzon merolae	27.63	8.00e-21	96.30
IUUC-Dre-027892	Danio rerio	88.29	0.00e+00	1071.00
IUUC-Dno-029016	Dasypus novemcinctus	92.97	0.00e+00	1084.00
IUUC-Dor-030179	Dipodomys ordii	85.23	0.00e+00	1003.00
IUUC-Dse-031362	Dothistroma septosporum	30.50	5.00e-46	178.00
IUUC-Dme-031790	Drosophila melanogaster	53.17	3.00e-111	396.00
IUUC-Eca-033704	Equus caballus	93.84	0.00e+00	880.00
IUUC-Eeu-034912	Erinaceus europaeus	90.14	0.00e+00	644.00
IUUC-Fca-036140	Felis catus	93.38	0.00e+00	1084.00
IUUC-Fal-037163	Ficedula albicollis	94.13	0.00e+00	1117.00
IUUC-Fso-038140	Fusarium solani	33.13	9.00e-54	204.00
IUUC-Gmo-039220	Gadus morhua	87.60	0.00e+00	1080.00
IUUC-Gga-040768	Gallus gallus	94.63	0.00e+00	1120.00
IUUC-Gac-042612	Gasterosteus aculeatus	90.08	0.00e+00	1104.00
IUUC-Gma-044186	Glycine max	37.03	1.00e-56	214.00
IUUC-Ggo-045322	Gorilla gorilla	90.22	0.00e+00	1118.00
IUUC-Hsa-046440	Homo sapiens	89.84	0.00e+00	1122.00
IUUC-Hvu-047057	Hordeum vulgare	32.24	1.00e-23	103.00
IUUC-Itr-048055	Ictidomys tridecemlineatus	95.03	0.00e+00	1118.00
IUUC-Lpe-051378	Leersia perrieri	36.73	1.00e-52	200.00
IUUC-Loc-051970	Lepisosteus oculatus	93.46	0.00e+00	1135.00
IUUC-Laf-053660	Loxodonta africana	93.87	0.00e+00	1083.00
IUUC-Mcc-055671	Macaca mulatta	93.76	0.00e+00	973.00
IUUC-Meu-056346	Macropus eugenii	93.84	0.00e+00	649.00
IUUC-Mtr-058649	Medicago truncatula	37.83	1.00e-55	211.00
IUUC-Mla-059179	Melampsora laricipopulina	30.77	6.00e-29	122.00
IUUC-Mga-059701	Meleagris gallopavo	94.69	0.00e+00	944.00
IUUC-Mmr-060982	Microcebus murinus	89.84	0.00e+00	1144.00
IUUC-Mdo-062998	Monodelphis domestica	94.23	0.00e+00	1071.00
IUUC-Mmu-064199	Mus musculus	94.58	0.00e+00	1132.00
IUUC-Mac-065546	Musa acuminata	35.43	9.00e-52	197.00
IUUC-Mpu-066310	Mustela putorius furo	92.48	0.00e+00	1034.00
IUUC-Mlu-068216	Myotis lucifugus	92.83	0.00e+00	1073.00
IUUC-Nle-069233	Nomascus leucogenys	94.23	0.00e+00	1134.00
IUUC-Opr-071024	Ochotona princeps	92.36	0.00e+00	1046.00
IUUC-Ont-072202	Oreochromis niloticus	89.36	0.00e+00	1071.00
IUUC-Oan-073075	Ornithorhynchus anatinus	94.27	0.00e+00	941.00
IUUC-Ocu-073978	Oryctolagus cuniculus	94.93	0.00e+00	1132.00
IUUC-Oba-075973	Oryza barthii	35.92	2.00e-53	203.00
IUUC-Obr-076346	Oryza brachyantha	37.03	1.00e-52	201.00
IUUC-Ogl-077048	Oryza glaberrima	36.44	5.00e-52	198.00
IUUC-Ogu-078225	Oryza glumaepatula	35.61	1.00e-48	187.00
IUUC-Oin-079597	Oryza indica	36.34	2.00e-56	214.00
IUUC-Olo-080349	Oryza longistaminata	41.54	1.00e-23	103.00
IUUC-Oni-082556	Oryza nivara	35.92	2.00e-53	203.00
IUUC-Opu-083344	Oryza punctata	36.20	9.00e-55	207.00
IUUC-Oru-085085	Oryza rufipogon	36.34	9.00e-57	214.00
IUUC-Osa-085527	Oryza sativa	36.34	2.00e-56	213.00
IUUC-Ola-086647	Oryzias latipes	89.66	0.00e+00	1093.00
IUUC-Olu-087793	Ostreococcus lucimarinus	31.22	2.00e-21	96.30
IUUC-Oga-088879	Otolemur garnettii	92.81	0.00e+00	1122.00
IUUC-Oar-089333	Ovis aries	91.68	0.00e+00	1029.00
IUUC-Ptr-090538	Pan troglodytes	89.84	0.00e+00	1141.00
IUUC-Pan-092473	Papio anubis	95.45	0.00e+00	1139.00
IUUC-Psi-094013	Pelodiscus sinensis	96.63	0.00e+00	1156.00
IUUC-Ppa-095812	Physcomitrella patens	37.22	8.00e-56	211.00
IUUC-Pfo-096913	Poecilia formosa	87.40	0.00e+00	1025.00
IUUC-Pab-098503	Pongo abelii	95.11	0.00e+00	1136.00
IUUC-Pop-099670	Populus trichocarpa	35.44	3.00e-53	202.00
IUUC-Pca-100287	Procavia capensis	92.19	0.00e+00	1112.00
IUUC-Ppe-101841	Prunus persica	35.31	3.00e-55	209.00
IUUC-Pva-102826	Pteropus vampyrus	93.21	0.00e+00	1101.00
IUUC-Pgr-103681	Puccinia graminis	25.09	7.00e-35	142.00
IUUC-Rno-106076	Rattus norvegicus	94.41	0.00e+00	1130.00
IUUC-Sha-107220	Sarcophilus harrisii	93.71	0.00e+00	1068.00
IUUC-Spo-108343	Schizosaccharomyces pombe	31.10	2.00e-40	159.00
IUUC-Smo-108846	Selaginella moellendorffii	38.40	7.00e-60	224.00
IUUC-Sit-109904	Setaria italica	37.30	7.00e-56	211.00
IUUC-Sly-111715	Solanum lycopersicum	36.47	4.00e-55	209.00
IUUC-Stu-112818	Solanum tuberosum	36.47	2.00e-55	209.00
IUUC-Sbi-114804	Sorghum bicolor	38.00	1.00e-54	207.00
IUUC-Sre-115177	Sporisorium reilianum	38.80	2.00e-32	134.00
IUUC-Ssc-116048	Sus scrofa	92.01	0.00e+00	1051.00
IUUC-Tgu-116514	Taeniopygia guttata	94.90	0.00e+00	945.00
IUUC-Tru-117529	Takifugu rubripes	88.91	0.00e+00	1098.00
IUUC-Tsy-119611	Tarsius syrichta	94.06	0.00e+00	1150.00
IUUC-Tni-120859	Tetraodon nigroviridis	90.09	0.00e+00	1025.00
IUUC-Tca-121339	Theobroma cacao	37.12	5.00e-56	212.00
IUUC-Tvi-122377	Trichoderma virens	34.47	6.00e-48	185.00
IUUC-Tae-124346	Triticum aestivum	37.14	1.00e-52	200.00
IUUC-Tur-126428	Triticum urartu	30.49	8.00e-34	137.00
IUUC-Tme-126969	Tuber melanosporum	34.58	9.00e-56	211.00
IUUC-Tbe-127985	Tupaia belangeri	89.18	0.00e+00	982.00
IUUC-Ttr-128936	Tursiops truncatus	92.19	0.00e+00	1098.00
IUUC-Vda-129875	Verticillium dahliae	32.09	9.00e-53	201.00
IUUC-Vvi-131155	Vitis vinifera	37.65	1.00e-55	210.00
IUUC-Xtr-131864	Xenopus tropicalis	93.72	0.00e+00	1118.00
IUUC-Xma-133459	Xiphophorus maculatus	87.27	0.00e+00	1051.00
IUUC-Yli-134475	Yarrowia lipolytica	28.66	2.00e-32	134.00
IUUC-Zma-135634	Zea mays	37.61	8.00e-55	207.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence