iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017340

Ensembl Protein ID

Bra007267.1-P

UniProt Accession

M4CSS5; M4CSS5_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra007267	Bra007267.1	Bra007267.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.40e-09	38.8	247	284

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLld 40
           +e++++ lv+MGFdr++a+qaL  a n+++aA++ Ll+
   Q: 247  SEEAIATLVSMGFDRNAARQALVHARNDVNAATNILLE 284
           699*********************************96 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MNGGPSGFHN APVTKAFVIT SALFTVLFGI QGRSSKLGLS YQDIFEKFRI WKLITSSFVF 60
SSTPELMFGL YLLYYFRVFE RQIGSNKYSV FILFSGTLSL LLEVTLLSLL KDTTENLLTS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACGGCG GTCCCTCCGG TTTCCGTACG TATCGCAACC ACCGTCCTCA TCTCGCTTGA 60
TCAGTTTCTT CTCACACTCG TGATCTTTTT TTTGGTGTTA ATTGAACTTT TGTGGAGTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR022764--Peptidase_S54_rhomboid_dom
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50030--UBA

Pfam

PF01694--Rhomboid
PF00627--UBA

SMART

SM00165--UBA

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0004252--F:serine-type endopeptidase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-004075	Anas platyrhynchos	33.49	4.00e-18	85.50
IUUC-Aca-004595	Anolis carolinensis	27.90	8.00e-20	90.50
IUUC-Aly-006411	Arabidopsis lyrata	91.81	3.00e-126	444.00
IUUC-Ath-007083	Arabidopsis thaliana	92.15	3.00e-136	477.00
IUUC-Ang-009777	Aspergillus niger	28.28	3.00e-08	51.60
IUUC-Ame-011242	Astyanax mexicanus	34.57	6.00e-07	47.40
IUUC-Bci-013918	Botrytis cinerea	30.05	1.00e-15	76.30
IUUC-Bdi-014098	Brachypodium distachyon	62.33	3.00e-87	314.00
IUUC-Cre-022898	Chlamydomonas reinhardtii	36.82	2.00e-22	99.80
IUUC-Cho-024706	Choloepus hoffmanni	26.90	1.00e-09	56.60
IUUC-Fso-038343	Fusarium solani	25.94	1.00e-11	63.20
IUUC-Gga-041116	Gallus gallus	33.33	8.00e-17	80.90
IUUC-Gma-043400	Glycine max	73.24	2.00e-112	397.00
IUUC-Hvu-047737	Hordeum vulgare	65.07	3.00e-95	341.00
IUUC-Kpa-049248	Komagataella pastoris	26.37	3.00e-07	48.90
IUUC-Lpe-050798	Leersia perrieri	64.73	1.00e-83	302.00
IUUC-Mor-057083	Magnaporthe oryzae	26.64	1.00e-13	69.70
IUUC-Mtr-057918	Medicago truncatula	69.97	1.00e-109	389.00
IUUC-Mvi-060380	Microbotryum violaceum	25.93	8.00e-07	47.80
IUUC-Mac-065099	Musa acuminata	66.55	2.00e-95	341.00
IUUC-Oba-075447	Oryza barthii	65.31	8.00e-94	336.00
IUUC-Obr-076812	Oryza brachyantha	63.61	3.00e-86	310.00
IUUC-Ogl-077322	Oryza glaberrima	60.42	6.00e-78	283.00
IUUC-Ogu-078221	Oryza glumaepatula	64.97	4.00e-89	320.00
IUUC-Oin-080171	Oryza indica	60.00	3.00e-85	307.00
IUUC-Olo-081041	Oryza longistaminata	53.51	5.00e-72	265.00
IUUC-Ome-081856	Oryza meridionalis	63.95	4.00e-87	313.00
IUUC-Oni-082795	Oryza nivara	65.31	2.00e-89	321.00
IUUC-Opu-083755	Oryza punctata	63.27	2.00e-86	311.00
IUUC-Oru-084198	Oryza rufipogon	65.31	2.00e-89	321.00
IUUC-Osa-085870	Oryza sativa	65.31	2.00e-89	321.00
IUUC-Olu-087791	Ostreococcus lucimarinus	31.58	4.00e-11	61.20
IUUC-Ppa-095918	Physcomitrella patens	58.22	2.00e-73	268.00
IUUC-Pop-098933	Populus trichocarpa	72.16	3.00e-111	394.00
IUUC-Ppe-101164	Prunus persica	75.09	1.00e-114	405.00
IUUC-Sce-106268	Saccharomyces cerevisiae	26.09	4.00e-03	35.40
IUUC-Sha-106739	Sarcophilus harrisii	31.98	6.00e-13	68.20
IUUC-Spo-108285	Schizosaccharomyces pombe	22.40	5.00e-09	55.10
IUUC-Smo-108945	Selaginella moellendorffii	56.62	1.00e-68	253.00
IUUC-Sit-109805	Setaria italica	63.95	7.00e-88	316.00
IUUC-Sly-111445	Solanum lycopersicum	67.01	5.00e-96	343.00
IUUC-Stu-112541	Solanum tuberosum	68.37	2.00e-98	351.00
IUUC-Sbi-113948	Sorghum bicolor	64.63	9.00e-90	322.00
IUUC-Tca-121053	Theobroma cacao	72.45	1.00e-111	395.00
IUUC-Tae-124394	Triticum aestivum	66.78	3.00e-98	350.00
IUUC-Tme-127059	Tuber melanosporum	24.77	2.00e-14	72.40
IUUC-Vvi-131299	Vitis vinifera	74.49	2.00e-113	401.00
IUUC-Xtr-132867	Xenopus tropicalis	28.71	1.00e-17	83.60
IUUC-Yli-134415	Yarrowia lipolytica	27.54	6.00e-11	60.80
IUUC-Zma-135390	Zea mays	64.41	2.00e-88	318.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence