iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pfo-096083

Ensembl Protein ID

ENSPFOP00000003124.1

UniProt Accession

A0A087XBH1; A0A087XBH1_POEFO

Genbank Protein ID

ENSPFOP00000003124

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AYCK01012806

Gene Name

DDB1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPFOG00000002768.1	ENSPFOT00000003128.1	ENSPFOP00000003124.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DDB1	0	1737.8	1	1141

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DDB1

   S: 2    mldrYvvtarkpsavvklvvgnftshkelNLliaksnrieiflvtpeglrpvvevklegsiavlrlfrpknekkdllfilteryntl 88
           m+++Yvvta+kp+av+++++g+fts+++lNLliak++r+ei++vt+eglrpv+ev ++g+iav++lfrpk+e+kdllfilt +yn++
   Q: 1    MSYNYVVTAQKPTAVNACITGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTSKYNAC 87
           799************************************************************************************ PP
   S: 89   ilelrdidessevvtradgevlDdigrssdsGlinviepkirlialelyqglfklIvldndikelkafnirleelnvsdvkflillt 175
           ile+++ +es++++tra+g+v+D+igr+s++G+i++++p++r+i+l+ly+glfk+I+ld+d+ elkafnirleel+v+dv+fl++++
   Q: 88   ILEYKQNGESIDIITRAHGNVQDRIGRPSETGIIGIVDPECRMIGLRLYDGLFKVIPLDRDNRELKAFNIRLEELQVIDVHFLYGCQ 174
           *************************************************************************************** PP
   S: 176  qptgrvlviyqdddgkhlktyelslkdKeFvkis.kqesiekeaellipvpsqlvgvlvlgeesivyksadnykdvdPylirqstai 261
           +pt  v++iyqd++g+h+ktye+sl++KeF+k++ kqe++e+ea+++ipvp++++g++++g+esi+y+++d+y +++P++i+qst++
   Q: 175  APT--VCFIYQDPQGRHVKTYEVSLREKEFNKGPwKQENVEAEASMVIPVPEPFGGAIIIGQESITYHNGDKYLAIAPPTIKQSTIV 259
           ***..********************************************************************************** PP
   S: 262  ryervdnngirylLgdfdGelkllllsaeeemsG.vevkslkielLgeisiaesisyldngllfvgsrfgdsQlvklisestgkgsy 347
           +++rvd ng+rylLgd++G+l++lll++ee m+G v +k+l++elLge+siae+++yldng++fvgsr+gdsQlvkl+++s+++gsy
   Q: 260  CHNRVDPNGSRYLLGDMEGRLFMLLLEKEELMDGtVALKDLHVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSY 346
           *************************************************************************************** PP
   S: 348  vvilerfknlkpIvdlvvvdldrrgqgqvvtvsgaskdGslRvirlgigieelasvdlkgvigllslkstidestdnslvlafvset 434
           v ++e+f+nl+pIvd++vvdl+r+gqgq+vt+sga+k+GslR+ir+gigi+e+as+dl+g++gl++l+s+  ++td++lvl+fv++t
   Q: 347  VTVMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSEAGRETDDMLVLSFVGQT 433
           *************************************************************************************** PP
   S: 435  kvlnlntgeeledtelsgvlsdlqtlltqdvidykqllqvTsqsvrLvssqikrllkeWkaknleiigvassNteqvliaatsndlv 521
           +vl+l+ gee+e+tel g+++++qt+ + +v ++kql+q+Ts svrLv ++ k+l++eWk++++++i+va +N +qv++a+ +++l+
   Q: 434  RVLMLS-GEEVEETELPGFVDNQQTFYCGNV-AHKQLIQITSGSVRLVVQDSKALVSEWKEPQGKNISVAACNHTQVVLAV-GRALY 517
           ******.************************.************************************************9.***** PP
   S: 522  yleigdgeldltstttlenevavldlinieddpnlsdleavglltdiskrililpdletiykeklggeiipRsilltefEnvtYlLi 608
           yl+i +gel+++stt++e+eva+ld++++++  n s+l+avgl+tdis+r+l+lp ++ ++ke+lggeiipRsil+t+fE+  YlL+
   Q: 518  YLQILAGELKQISTTEMEHEVACLDITPLGEGGNESTLCAVGLWTDISARVLKLPCFTALHKEMLGGEIIPRSILMTTFEGSYYLLC 604
           *************************************************************************************** PP
   S: 609  algdGalvsyildidtgdesdakksnlgtspgtlktfkslsttqvfassDrPtvIyssskkLvfSnVnlkeVqylCsldseaypdsl 695
           algdGal+++ ld +tg +s++kk++lgt+p++l+tf+slst +vfa+sDrPtvIyss++kLvfSnVnlkeV+y+C+l+se+ypdsl
   Q: 605  ALGDGALFYFGLDLQTGALSERKKVTLGTQPTVLRTFRSLSTSNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSEGYPDSL 691
           *************************************************************************************** PP
   S: 696  alanngslvigtvddiqklkiRsiplgeslrriayqesvitfgvisdrreldf.klklkalrnnasilalvpdiennklfsdglril 781
           alann++l+igt+d+iqkl+iR++pl+es+rri+yqe++++fgv+s+r e+++ ++ + a r++as++al+++++++klf +++  +
   Q: 692  ALANNSTLTIGTIDEIQKLHIRTVPLYESPRRICYQEVSQCFGVLSSRVEIQDvSGTTSAVRPSASTQALSSSVSSSKLFPSSTSPH 778
           *****************************************************9********************************* PP
   S: 782  elseleenevnfllvlDkntfelllaqdlrewEtavsllSqklkdDseeyyvvktalvlpeenelkkgrilvfsvedslklkLltva 868
           e+s++ee+ev++llv+D++tfe+l+a+++ + E+ +s++S++l++D+++y++v+ta+v+pee+e+k+gri+vf+++d+   kL+tva
   Q: 779  ETSFGEEVEVHSLLVVDQHTFEVLHAHQFLPSEYSLSIVSCRLGKDPSVYFIVGTAMVYPEEPEPKQGRIIVFHYTDG---KLQTVA 862
           ******************************************************************************...****** PP
   S: 869  ekkvkgavidlvklNgkllaainseirlyewkvmgtdekelrkeCernntilaLtlktrkdfivVgDlmrsvtLllykdlegsfeEs 955
           ek+vkgav+++v++Ngklla+ins++rlyew    t ekelr+eC+++n+i+aL+lkt++dfi+VgDlmrsv Ll+yk +eg+feE+
   Q: 863  EKEVKGAVYSMVEFNGKLLASINSTVRLYEW----TAEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEI 945
           *******************************....**************************************************** PP
   S: 956  ardynlewmsaveilnddiflgaencgNlfvvkkdikagltdeerslleevgefrlgefvevfrfgtlvlqdvgerevnrssevifg 1042
           ard+n++wmsaveil+dd+flgaen++Nlfv++kd +a++tdeer++l+evg f+lgefv+vf++g+lvlq++ge++++++++v+fg
   Q: 946  ARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKD-SAATTDEERQHLQEVGVFHLGEFVNVFCHGSLVLQNLGESSTPTQGSVLFG 1031
           ***********************************.*************************************************** PP
   S: 1043 tengeigvilrlrrellkflrnlestlkkvikrvakieHs.syRsFetekrterasgfvdgdLiesilDlsrdkavdilkvl.yekr 1127
           t+ng+ig++++l++ ++++l +l+++l kvik+v+kieHs  +RsF+te++te+ +gf+dgdLies+lDlsr k+++++++l  +++
   Q: 1032 TVNGMIGLVTSLSEGWYSLLLDLQNRLTKVIKSVGKIEHSdTWRSFHTERKTEQG

Organism

Poecilia formosa

Protein Sequence
(Fasta)

MSYNYVVTAQ KPTAVNACIT GHFTSAEDLN LLIAKNTRLE IYVVTAEGLR PVKEVGMYGK 60
IAVMELFRPK GESKDLLFIL TSKYNACILE YKQNGESIDI ITRAHGNVQD RIGRPSETGI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTGCGCCAA CATCTCAAAC GTACCCTGTA AAACACCCTC CAGTACGTAG GGGGCGCTCC 60
AACTCTGGAT TAGTGCACGT CGTTAACCTA AACGACTTCC CCAACTGTTT CCGGAAGTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004871--Cleavage/polyA-sp_fac_asu_C
IPR031297--DDB1
IPR015943--WD40/YVTN_repeat-like_dom
IPR017986--WD40_repeat_dom

Pfam

PF03178--CPSF_A

Gene Ontology

GO:0005634--C:nucleus
GO:0003676--F:nucleic acid binding
GO:0006281--P:DNA repair

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000120	Aegilops tauschii	49.29	0.00e+00	1120.00
IUUC-Aml-002096	Ailuropoda melanoleuca	90.89	0.00e+00	2121.00
IUUC-Atr-002742	Amborella trichopoda	52.57	0.00e+00	1178.00
IUUC-Apl-003624	Anas platyrhynchos	89.65	0.00e+00	2063.00
IUUC-Aca-005085	Anolis carolinensis	90.27	0.00e+00	2107.00
IUUC-Aly-005857	Arabidopsis lyrata	52.83	0.00e+00	1184.00
IUUC-Ath-006658	Arabidopsis thaliana	52.92	0.00e+00	1181.00
IUUC-Acl-008149	Aspergillus clavatus	27.28	1.00e-107	385.00
IUUC-Afl-008549	Aspergillus flavus	28.05	1.00e-110	395.00
IUUC-Afu-009076	Aspergillus fumigatus	27.59	4.00e-117	416.00
IUUC-Ani-009302	Aspergillus nidulans	27.30	6.00e-91	329.00
IUUC-Ang-009636	Aspergillus niger	28.22	5.00e-83	303.00
IUUC-Aor-010073	Aspergillus oryzae	28.10	1.00e-115	411.00
IUUC-Ate-010422	Aspergillus terreus	26.81	1.00e-104	374.00
IUUC-Ame-011643	Astyanax mexicanus	85.43	0.00e+00	1919.00
IUUC-Bgr-012164	Blumeria graminis	27.15	1.00e-101	365.00
IUUC-Bta-012494	Bos taurus	90.80	0.00e+00	2120.00
IUUC-Bci-013957	Botrytis cinerea	26.29	4.00e-88	320.00
IUUC-Bdi-014186	Brachypodium distachyon	52.09	0.00e+00	1160.00
IUUC-Bol-015922	Brassica oleracea	53.18	0.00e+00	1196.00
IUUC-Bra-017300	Brassica rapa	53.18	0.00e+00	1190.00
IUUC-Cel-018239	Caenorhabditis elegans	37.13	0.00e+00	768.00
IUUC-Cja-019165	Callithrix jacchus	90.80	0.00e+00	2118.00
IUUC-Cfa-020406	Canis familiaris	90.89	0.00e+00	2121.00
IUUC-Cpo-022154	Cavia porcellus	90.71	0.00e+00	2118.00
IUUC-Cre-022557	Chlamydomonas reinhardtii	41.76	0.00e+00	800.00
IUUC-Csa-024061	Chlorocebus sabaeus	90.80	0.00e+00	2118.00
IUUC-Cho-024554	Choloepus hoffmanni	83.90	0.00e+00	860.00
IUUC-Cin-025466	Ciona intestinalis	61.32	0.00e+00	1461.00
IUUC-Csv-026370	Ciona savignyi	60.31	0.00e+00	1308.00
IUUC-Cgl-026595	Colletotrichum gloeosporioides	26.03	1.00e-98	355.00
IUUC-Cme-027342	Cyanidioschyzon merolae	27.55	6.00e-112	399.00
IUUC-Dre-027448	Danio rerio	95.69	0.00e+00	1049.00
IUUC-Dno-029794	Dasypus novemcinctus	91.60	0.00e+00	2009.00
IUUC-Dor-030789	Dipodomys ordii	76.03	0.00e+00	885.00
IUUC-Dse-031491	Dothistroma septosporum	28.37	1.00e-115	411.00
IUUC-Dme-031940	Drosophila melanogaster	60.47	0.00e+00	1354.00
IUUC-Ete-032913	Echinops telfairi	73.20	0.00e+00	788.00
IUUC-Eca-033777	Equus caballus	90.36	0.00e+00	2105.00
IUUC-Eeu-034900	Erinaceus europaeus	87.04	0.00e+00	1022.00
IUUC-Fca-035869	Felis catus	90.89	0.00e+00	2121.00
IUUC-Fal-036777	Ficedula albicollis	90.29	0.00e+00	2104.00
IUUC-Fox-037954	Fusarium oxysporum	26.19	3.00e-103	370.00
IUUC-Fso-038292	Fusarium solani	26.23	6.00e-106	379.00
IUUC-Gmo-038815	Gadus morhua	89.50	0.00e+00	1035.00
IUUC-Ggr-039907	Gaeumannomyces graminis	25.96	8.00e-93	335.00
IUUC-Gga-040995	Gallus gallus	90.53	0.00e+00	2117.00
IUUC-Gac-042390	Gasterosteus aculeatus	96.70	0.00e+00	2104.00
IUUC-Gma-042743	Glycine max	52.61	0.00e+00	1157.00
IUUC-Ggo-044891	Gorilla gorilla	90.73	0.00e+00	2121.00
IUUC-Hsa-046709	Homo sapiens	90.80	0.00e+00	2118.00
IUUC-Hvu-047504	Hordeum vulgare	51.48	0.00e+00	1145.00
IUUC-Itr-048678	Ictidomys tridecemlineatus	90.80	0.00e+00	2120.00
IUUC-Lch-050565	Latimeria chalumnae	90.72	0.00e+00	2110.00
IUUC-Lpe-051260	Leersia perrieri	52.75	0.00e+00	1170.00
IUUC-Loc-052091	Lepisosteus oculatus	87.24	0.00e+00	1551.00
IUUC-Lma-053246	Leptosphaeria maculans	26.25	5.00e-104	372.00
IUUC-Laf-053502	Loxodonta africana	90.71	0.00e+00	2119.00
IUUC-Mcc-054802	Macaca mulatta	90.81	0.00e+00	2102.00
IUUC-Meu-056808	Macropus eugenii	88.81	0.00e+00	1352.00
IUUC-Mor-057253	Magnaporthe oryzae	25.55	3.00e-78	287.00
IUUC-Mpo-057562	Magnaporthe poae	25.72	6.00e-92	332.00
IUUC-Mtr-057743	Medicago truncatula	51.83	0.00e+00	1158.00
IUUC-Mla-059154	Melampsora laricipopulina	24.98	1.00e-80	295.00
IUUC-Mga-059824	Meleagris gallopavo	89.94	0.00e+00	1978.00
IUUC-Mvi-060279	Microbotryum violaceum	27.07	7.00e-111	395.00
IUUC-Mmr-061215	Microcebus murinus	90.45	0.00e+00	2105.00
IUUC-Mdo-062028	Monodelphis domestica	88.76	0.00e+00	1740.00
IUUC-Mmu-064327	Mus musculus	90.97	0.00e+00	2122.00
IUUC-Mac-065445	Musa acuminata	53.00	0.00e+00	1154.00
IUUC-Mpu-065814	Mustela putorius furo	87.82	0.00e+00	2026.00
IUUC-Mlu-067136	Myotis lucifugus	90.97	0.00e+00	2115.00
IUUC-Nfi-068355	Neosartorya fischeri	27.42	2.00e-110	394.00
IUUC-Ncr-068620	Neurospora crassa	25.85	7.00e-90	325.00
IUUC-Nle-069566	Nomascus leucogenys	90.72	0.00e+00	2091.00
IUUC-Opr-070915	Ochotona princeps	82.17	0.00e+00	1698.00
IUUC-Ont-071753	Oreochromis niloticus	98.07	0.00e+00	2236.00
IUUC-Oan-073187	Ornithorhynchus anatinus	90.51	0.00e+00	1910.00
IUUC-Ocu-074619	Oryctolagus cuniculus	90.97	0.00e+00	2124.00
IUUC-Oba-075091	Oryza barthii	50.36	0.00e+00	810.00
IUUC-Obr-076425	Oryza brachyantha	53.18	0.00e+00	1164.00
IUUC-Ogu-078794	Oryza glumaepatula	52.83	0.00e+00	1170.00
IUUC-Oin-079725	Oryza indica	52.66	0.00e+00	1157.00
IUUC-Olo-080842	Oryza longistaminata	50.72	0.00e+00	1073.00
IUUC-Ome-081818	Oryza meridionalis	52.92	0.00e+00	1174.00
IUUC-Oni-082879	Oryza nivara	52.14	0.00e+00	1149.00
IUUC-Opu-083361	Oryza punctata	52.15	0.00e+00	1164.00
IUUC-Oru-084781	Oryza rufipogon	52.83	0.00e+00	1172.00
IUUC-Osa-086293	Oryza sativa	52.83	0.00e+00	1172.00
IUUC-Ola-086881	Oryzias latipes	97.29	0.00e+00	2225.00
IUUC-Olu-087674	Ostreococcus lucimarinus	46.09	0.00e+00	944.00
IUUC-Oga-089056	Otolemur garnettii	90.97	0.00e+00	2122.00
IUUC-Oar-089457	Ovis aries	91.01	0.00e+00	2090.00
IUUC-Ptr-091179	Pan troglodytes	90.65	0.00e+00	2081.00
IUUC-Pan-092019	Papio anubis	90.57	0.00e+00	2117.00
IUUC-Psi-093407	Pelodiscus sinensis	90.04	0.00e+00	2070.00
IUUC-Pma-094272	Petromyzon marinus	87.03	0.00e+00	1852.00
IUUC-Pno-094864	Phaeosphaeria nodorum	27.05	2.00e-111	397.00
IUUC-Ppa-095885	Physcomitrella patens	53.34	0.00e+00	1167.00
IUUC-Pab-098652	Pongo abelii	86.74	0.00e+00	2006.00
IUUC-Pop-099593	Populus trichocarpa	52.97	0.00e+00	1134.00
IUUC-Pca-100189	Procavia capensis	88.38	0.00e+00	1191.00
IUUC-Ppe-101987	Prunus persica	52.70	0.00e+00	1119.00
IUUC-Pva-102605	Pteropus vampyrus	90.71	0.00e+00	2116.00
IUUC-Pgr-103659	Puccinia graminis	24.98	3.00e-77	284.00
IUUC-Ptt-103884	Puccinia triticina	23.39	7.00e-60	226.00
IUUC-Pte-104233	Pyrenophora teres	26.72	2.00e-116	414.00
IUUC-Pyt-104454	Pyrenophora triticirepentis	27.30	5.00e-115	409.00
IUUC-Rno-106004	Rattus norvegicus	90.97	0.00e+00	2122.00
IUUC-Sha-106726	Sarcophilus harrisii	88.33	0.00e+00	1919.00
IUUC-Sja-107864	Schizosaccharomyces japonicus	24.42	5.00e-76	279.00
IUUC-Spo-108029	Schizosaccharomyces pombe	26.43	1.00e-101	365.00
IUUC-Ssl-108441	Sclerotinia sclerotiorum	25.59	8.00e-82	299.00
IUUC-Smo-108808	Selaginella moellendorffii	53.01	0.00e+00	1212.00
IUUC-Sit-109735	Setaria italica	53.17	0.00e+00	1164.00
IUUC-Sly-111520	Solanum lycopersicum	52.43	0.00e+00	1152.00
IUUC-Sar-113606	Sorex araneus	84.65	5.00e-118	419.00
IUUC-Sbi-114539	Sorghum bicolor	52.19	0.00e+00	1152.00
IUUC-Sre-114936	Sporisorium reilianum	25.32	1.00e-64	242.00
IUUC-Ssc-116038	Sus scrofa	90.80	0.00e+00	2118.00
IUUC-Tgu-117512	Taeniopygia guttata	90.27	0.00e+00	2105.00
IUUC-Tru-117593	Takifugu rubripes	97.02	0.00e+00	2216.00
IUUC-Tsy-119513	Tarsius syrichta	85.94	0.00e+00	1084.00
IUUC-Tni-120551	Tetraodon nigroviridis	92.12	0.00e+00	1813.00
IUUC-Tca-121505	Theobroma cacao	53.31	0.00e+00	1157.00
IUUC-Tre-122136	Trichoderma reesei	26.28	4.00e-104	373.00
IUUC-Tvi-122512	Trichoderma virens	25.65	4.00e-103	369.00
IUUC-Tae-124186	Triticum aestivum	51.39	0.00e+00	1144.00
IUUC-Tur-126451	Triticum urartu	51.81	0.00e+00	1040.00
IUUC-Tme-127057	Tuber melanosporum	29.56	2.00e-116	414.00
IUUC-Ttr-128891	Tursiops truncatus	84.75	0.00e+00	1337.00
IUUC-Uma-129583	Ustilago maydis	25.64	4.00e-52	200.00
IUUC-Vda-129870	Verticillium dahliae	25.54	7.00e-92	332.00
IUUC-Vpa-130117	Vicugna pacos	86.57	0.00e+00	1603.00
IUUC-Vvi-131033	Vitis vinifera	52.53	0.00e+00	1156.00
IUUC-Xtr-131987	Xenopus tropicalis	88.12	0.00e+00	2037.00
IUUC-Xma-134117	Xiphophorus maculatus	97.99	0.00e+00	2231.00
IUUC-Zma-134758	Zea mays	52.75	0.00e+00	1170.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence