iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114792

Ensembl Protein ID

Sb08g020980.1

UniProt Accession

C5YRJ4; C5YRJ4_SORBI

Genbank Protein ID

EES16340.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000767

Gene Name

SORBI_008G163500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb08g020980	Sb08g020980.1	Sb08g020980.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.90e-11	43.0	275	309

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           H++sv  l+f sd  +l sG+  g+i vW l+tg+
   Q: 275  HSSSVKFLKFsSDgAYLFSGGLEGVIVVWQLDTGK 309
           9999999999*999*****************9986 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MITGGQSYVS APPAFSADGR LLLVCSGRAV SVFSTATAML VSELEGHEGD VTAVVVVAPP 60
AQATAAAKLA SYCWTAGLDG VLIYWDFLAA EVVRKVQVGL PVHSMVVPNI CRTSKGAEVP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATCACCG GCGGCCAGAG CTACGTCTCC GCGCCGCCGG CCTTCTCGGC CGACGGGCGC 60
CTCCTCCTCG TCTGCTCCGG CCGCGCCGTC TCCGTCTTCA GCACCGCCAC CGCCATGCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011044--Quino_amine_DH_bsu
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

sbi:SORBI_08g020980

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001159	Aegilops tauschii	67.35	0.00e+00	983.00
IUUC-Aml-001772	Ailuropoda melanoleuca	24.21	7.00e-49	188.00
IUUC-Atr-003057	Amborella trichopoda	49.45	0.00e+00	761.00
IUUC-Apl-004225	Anas platyrhynchos	22.01	4.00e-39	155.00
IUUC-Aca-004528	Anolis carolinensis	24.72	2.00e-53	203.00
IUUC-Aly-005971	Arabidopsis lyrata	48.24	0.00e+00	768.00
IUUC-Ath-007216	Arabidopsis thaliana	47.87	0.00e+00	770.00
IUUC-Afu-009094	Aspergillus fumigatus	24.60	6.00e-20	91.70
IUUC-Ani-009273	Aspergillus nidulans	26.73	4.00e-21	95.90
IUUC-Ate-010477	Aspergillus terreus	24.56	3.00e-19	89.70
IUUC-Ame-011596	Astyanax mexicanus	23.62	6.00e-50	191.00
IUUC-Bta-013087	Bos taurus	23.31	7.00e-50	191.00
IUUC-Bdi-014281	Brachypodium distachyon	81.02	0.00e+00	1266.00
IUUC-Bol-015950	Brassica oleracea	48.16	0.00e+00	766.00
IUUC-Bra-016891	Brassica rapa	48.41	0.00e+00	780.00
IUUC-Cja-019291	Callithrix jacchus	24.09	2.00e-46	180.00
IUUC-Cfa-020826	Canis familiaris	24.51	7.00e-50	191.00
IUUC-Cpo-022075	Cavia porcellus	24.21	2.00e-52	199.00
IUUC-Cre-022871	Chlamydomonas reinhardtii	28.30	2.00e-07	47.40
IUUC-Csa-023922	Chlorocebus sabaeus	24.79	3.00e-52	199.00
IUUC-Cho-025070	Choloepus hoffmanni	24.18	5.00e-45	175.00
IUUC-Cin-025661	Ciona intestinalis	23.63	2.00e-19	90.10
IUUC-Cgl-026473	Colletotrichum gloeosporioides	36.36	2.00e-12	67.80
IUUC-Cne-026862	Cryptococcus neoformans	23.57	2.00e-26	113.00
IUUC-Cme-027187	Cyanidioschyzon merolae	28.11	1.00e-12	67.80
IUUC-Dre-028194	Danio rerio	22.70	4.00e-51	195.00
IUUC-Dno-029393	Dasypus novemcinctus	23.66	2.00e-43	170.00
IUUC-Dor-030476	Dipodomys ordii	21.80	2.00e-37	149.00
IUUC-Dse-031561	Dothistroma septosporum	27.82	4.00e-22	99.80
IUUC-Dme-031625	Drosophila melanogaster	24.61	1.00e-29	124.00
IUUC-Ete-033185	Echinops telfairi	25.83	2.00e-40	160.00
IUUC-Eca-034192	Equus caballus	23.66	6.00e-46	178.00
IUUC-Eeu-034737	Erinaceus europaeus	27.84	1.00e-18	87.80
IUUC-Fca-036473	Felis catus	24.72	4.00e-53	202.00
IUUC-Fal-037083	Ficedula albicollis	22.31	1.00e-40	160.00
IUUC-Fox-037801	Fusarium oxysporum	23.16	1.00e-12	67.80
IUUC-Fso-038117	Fusarium solani	22.89	4.00e-13	69.70
IUUC-Gmo-038612	Gadus morhua	22.79	2.00e-44	173.00
IUUC-Ggr-040067	Gaeumannomyces graminis	23.35	3.00e-13	70.50
IUUC-Gga-040173	Gallus gallus	25.78	2.00e-25	109.00
IUUC-Gac-042628	Gasterosteus aculeatus	24.20	2.00e-50	193.00
IUUC-Gma-043929	Glycine max	51.55	0.00e+00	758.00
IUUC-Ggo-044723	Gorilla gorilla	24.33	1.00e-49	190.00
IUUC-Hsa-045976	Homo sapiens	24.66	9.00e-52	197.00
IUUC-Itr-048873	Ictidomys tridecemlineatus	24.29	5.00e-49	188.00
IUUC-Lch-049534	Latimeria chalumnae	22.97	2.00e-45	177.00
IUUC-Lpe-050961	Leersia perrieri	77.78	0.00e+00	1238.00
IUUC-Loc-052545	Lepisosteus oculatus	23.96	3.00e-44	172.00
IUUC-Laf-053408	Loxodonta africana	23.68	9.00e-52	197.00
IUUC-Mcc-055400	Macaca mulatta	24.91	7.00e-53	201.00
IUUC-Meu-056448	Macropus eugenii	27.38	1.00e-18	87.80
IUUC-Mor-057047	Magnaporthe oryzae	23.45	7.00e-13	68.90
IUUC-Mpo-057552	Magnaporthe poae	35.23	4.00e-12	66.20
IUUC-Mtr-058588	Medicago truncatula	47.07	0.00e+00	711.00
IUUC-Mla-059102	Melampsora laricipopulina	22.79	1.00e-16	81.60
IUUC-Mga-059364	Meleagris gallopavo	22.58	2.00e-37	150.00
IUUC-Mvi-060387	Microbotryum violaceum	26.49	3.00e-37	149.00
IUUC-Mmr-061240	Microcebus murinus	24.46	8.00e-51	194.00
IUUC-Mdo-062461	Monodelphis domestica	25.03	2.00e-51	196.00
IUUC-Mmu-063820	Mus musculus	24.29	3.00e-49	189.00
IUUC-Mac-064657	Musa acuminata	57.32	0.00e+00	891.00
IUUC-Mpu-066642	Mustela putorius furo	24.34	8.00e-48	184.00
IUUC-Mlu-067113	Myotis lucifugus	23.36	2.00e-39	157.00
IUUC-Ncr-068881	Neurospora crassa	22.99	2.00e-19	90.50
IUUC-Nle-069700	Nomascus leucogenys	24.79	1.00e-51	197.00
IUUC-Opr-070788	Ochotona princeps	25.25	4.00e-42	166.00
IUUC-Ont-071934	Oreochromis niloticus	24.60	5.00e-55	208.00
IUUC-Oan-073397	Ornithorhynchus anatinus	24.67	7.00e-11	60.50
IUUC-Ocu-074934	Oryctolagus cuniculus	24.30	7.00e-52	197.00
IUUC-Oba-075556	Oryza barthii	79.34	0.00e+00	1129.00
IUUC-Obr-076321	Oryza brachyantha	78.53	0.00e+00	1264.00
IUUC-Ogl-077721	Oryza glaberrima	79.65	0.00e+00	1278.00
IUUC-Ogu-078969	Oryza glumaepatula	79.28	0.00e+00	1269.00
IUUC-Oin-079774	Oryza indica	79.53	0.00e+00	1276.00
IUUC-Olo-080797	Oryza longistaminata	70.26	0.00e+00	959.00
IUUC-Ome-081288	Oryza meridionalis	80.27	0.00e+00	1281.00
IUUC-Oni-082679	Oryza nivara	79.53	0.00e+00	1276.00
IUUC-Opu-083382	Oryza punctata	79.58	0.00e+00	1268.00
IUUC-Oru-085008	Oryza rufipogon	79.15	0.00e+00	1273.00
IUUC-Osa-086286	Oryza sativa	79.28	0.00e+00	1276.00
IUUC-Ola-087159	Oryzias latipes	23.28	9.00e-50	191.00
IUUC-Olu-087737	Ostreococcus lucimarinus	26.96	1.00e-65	243.00
IUUC-Oga-087932	Otolemur garnettii	24.18	9.00e-49	187.00
IUUC-Oar-090087	Ovis aries	23.44	2.00e-48	186.00
IUUC-Ptr-090836	Pan troglodytes	24.54	3.00e-51	196.00
IUUC-Pan-091703	Papio anubis	25.06	2.00e-48	186.00
IUUC-Psi-093289	Pelodiscus sinensis	24.20	1.00e-45	177.00
IUUC-Pma-094549	Petromyzon marinus	26.27	9.00e-21	94.70
IUUC-Ppa-095363	Physcomitrella patens	35.41	1.00e-129	456.00
IUUC-Pfo-096805	Poecilia formosa	22.97	5.00e-47	182.00
IUUC-Pab-098646	Pongo abelii	24.54	1.00e-51	197.00
IUUC-Pop-099099	Populus trichocarpa	53.72	0.00e+00	833.00
IUUC-Pca-100866	Procavia capensis	23.93	1.00e-46	180.00
IUUC-Ppe-101421	Prunus persica	56.36	0.00e+00	627.00
IUUC-Pva-103237	Pteropus vampyrus	24.29	2.00e-23	103.00
IUUC-Pgr-103514	Puccinia graminis	22.25	5.00e-11	62.80
IUUC-Pte-104266	Pyrenophora teres	22.89	7.00e-20	92.00
IUUC-Pyt-104657	Pyrenophora triticirepentis	23.50	3.00e-21	96.70
IUUC-Rno-105785	Rattus norvegicus	24.72	2.00e-50	193.00
IUUC-Sha-107623	Sarcophilus harrisii	24.75	7.00e-50	191.00
IUUC-Sja-107756	Schizosaccharomyces japonicus	39.08	2.00e-08	53.50
IUUC-Spo-108237	Schizosaccharomyces pombe	21.23	9.00e-15	75.10
IUUC-Smo-108802	Selaginella moellendorffii	32.42	5.00e-112	397.00
IUUC-Sit-110013	Setaria italica	88.53	0.00e+00	1390.00
IUUC-Sly-111872	Solanum lycopersicum	48.95	0.00e+00	756.00
IUUC-Sar-113336	Sorex araneus	31.91	9.00e-10	58.20
IUUC-Sre-114923	Sporisorium reilianum	26.95	2.00e-43	170.00
IUUC-Ssc-115517	Sus scrofa	23.90	3.00e-48	186.00
IUUC-Tgu-116868	Taeniopygia guttata	23.39	2.00e-43	170.00
IUUC-Tru-118503	Takifugu rubripes	23.35	2.00e-46	180.00
IUUC-Tsy-119349	Tarsius syrichta	24.57	2.00e-50	193.00
IUUC-Tni-120437	Tetraodon nigroviridis	23.62	2.00e-46	180.00
IUUC-Tca-121127	Theobroma cacao	50.06	0.00e+00	776.00
IUUC-Tvi-122323	Trichoderma virens	20.98	5.00e-12	65.90
IUUC-Tae-123418	Triticum aestivum	76.57	0.00e+00	1214.00
IUUC-Tme-127167	Tuber melanosporum	24.68	1.00e-22	101.00
IUUC-Tbe-127376	Tupaia belangeri	28.87	2.00e-19	90.10
IUUC-Ttr-128949	Tursiops truncatus	23.53	3.00e-45	176.00
IUUC-Uma-129522	Ustilago maydis	25.86	1.00e-42	167.00
IUUC-Vda-129794	Verticillium dahliae	20.72	1.00e-07	51.60
IUUC-Vpa-130282	Vicugna pacos	23.33	2.00e-42	166.00
IUUC-Xtr-132078	Xenopus tropicalis	25.95	6.00e-41	161.00
IUUC-Xma-133958	Xiphophorus maculatus	23.51	2.00e-49	189.00
IUUC-Zma-135807	Zea mays	91.06	0.00e+00	1440.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence