iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Spo-108152

Ensembl Protein ID

SPAC25H1.06.1:pep

UniProt Accession

Q9Y825; YEC6_SCHPO

Genbank Protein ID

CAB11602.1

Protein Name

Uncharacterized WD repeat-containing protein C25H1.06

Genbank Nucleotide ID

CU329670

Gene Name

pcf3; SPAC25H1.06

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SPAC25H1.06	SPAC25H1.06.1	SPAC25H1.06.1:pep

Annotation

mRNA Expression
GEO
Protein-protein Interaction
iRefIndex	Mentha
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-10	38.7	371	402

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWD 29
           gH++ v+ ++f   +   ++s +dD+ +++W 
   Q: 371  GHKGTVNEVDFdpFEaQCIASVADDNELHIWK 402
           8**********8744567*************8 PP

Organism

Schizosaccharomyces pombe

Protein Sequence
(Fasta)

MNTELDMQNF EHIKFLENQI SEDHFRWKKN SKHLYNLLIT RTLTWPSLSI QWLSAMESIT 60
EKAVLKNRLL LGTHAAEGMP NFLQLADLDL PDFNQTILDP VKHYNEDTGE LGGYSMQHSC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGGTAATCCA TATTTCGTAC TAAGCGCTTC GTCTACCGAC GTTGTAGGTT CAACCTTCCA 60
TGTACATACC TTCCAACAAA ACTTTCTTAC ATATTGATGG CAAATAGTGG CTTATAGACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd

SMART

SM00320--WD40

Gene Ontology

GO:0033186--C:CAF-1 complex
GO:0005737--C:cytoplasm
GO:0005829--C:cytosol
GO:0043596--C:nuclear replication fork
GO:0005634--C:nucleus
GO:0006335--P:DNA replication-dependent nucleosome assembly
GO:0070829--P:heterochromatin maintenance
GO:1990426--P:mitotic recombination-dependent replication fork processing

KEGG

spo:SPAC25H1.06

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence