iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cne-026911

Ensembl Protein ID

AAW41360

UniProt Accession

Q5KN24; Q55YQ3; Q5KN24_CRYNJ

Genbank Protein ID

AAW41360.1

Protein Name

Ribosomal large subunit assembly and maintenance-related protein, putative

Genbank Nucleotide ID

AE017341

Gene Name

CNA07990

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CNA07990	AAW41360	AAW41360

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.60e-27	90.9	141	171

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gHtdsv +  +  d  ++++G+ Dg++ vW 
   Q: 141  GHTDSVIAAGWsFDgEMVATGGMDGKVIVWQ 171
           8*******99**666***************4 PP

Organism

Cryptococcus neoformans

Protein Sequence
(Fasta)

MSVHEEDQLQ DPQLQEDDVV EIVEDDGDIP MDEDDDDNDK YDAEIIIGGP GPGEEDLMMN 60
EEEGEGEQRA DNSWGVNALH NQQQSIFTIS LHPAFPNPPL AISGGEDDAG FIFCPIPTDS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCTTGCAGA GTGAGGTTTG GTTTTCTAGC CTAGCTGCTC TATTCCCATC TCCTCTACCG 60
TTCCAGCACA TTTGTAAAAT ATGTCCGTCC ACGAGGAAGA CCAGCTGCAA GACCCTCAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0030687--C:preribosome, large subunit precursor
GO:0051082--F:unfolded protein binding
GO:0042273--P:ribosomal large subunit biogenesis

KEGG

cne:CNA07990

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000794	Aegilops tauschii	29.14	1.00e-38	152.00
IUUC-Aml-001781	Ailuropoda melanoleuca	27.18	8.00e-27	112.00
IUUC-Atr-003169	Amborella trichopoda	26.65	7.00e-30	122.00
IUUC-Aca-004594	Anolis carolinensis	25.61	3.00e-23	100.00
IUUC-Ath-007701	Arabidopsis thaliana	26.19	3.00e-32	130.00
IUUC-Ago-007790	Ashbya gossypii	25.91	7.00e-25	106.00
IUUC-Ame-011651	Astyanax mexicanus	26.32	4.00e-27	113.00
IUUC-Bta-012833	Bos taurus	26.67	1.00e-26	112.00
IUUC-Bdi-014831	Brachypodium distachyon	29.18	4.00e-39	153.00
IUUC-Bol-015389	Brassica oleracea	27.61	5.00e-32	130.00
IUUC-Bra-017115	Brassica rapa	26.19	2.00e-28	118.00
IUUC-Cja-019433	Callithrix jacchus	27.23	4.00e-27	113.00
IUUC-Cfa-020093	Canis familiaris	26.72	9.00e-27	112.00
IUUC-Cpo-021742	Cavia porcellus	27.23	2.00e-27	114.00
IUUC-Cre-022781	Chlamydomonas reinhardtii	26.60	1.00e-32	132.00
IUUC-Csa-023498	Chlorocebus sabaeus	27.48	4.00e-27	113.00
IUUC-Cho-024628	Choloepus hoffmanni	28.46	1.00e-21	95.50
IUUC-Dre-028528	Danio rerio	27.51	3.00e-29	120.00
IUUC-Dno-029297	Dasypus novemcinctus	26.67	5.00e-27	113.00
IUUC-Ete-033100	Echinops telfairi	27.64	5.00e-20	89.70
IUUC-Eca-034277	Equus caballus	27.23	1.00e-27	115.00
IUUC-Fca-036115	Felis catus	26.67	3.00e-27	114.00
IUUC-Fal-036864	Ficedula albicollis	26.56	5.00e-29	119.00
IUUC-Gac-042027	Gasterosteus aculeatus	26.46	2.00e-29	120.00
IUUC-Ggo-045036	Gorilla gorilla	27.23	3.00e-27	114.00
IUUC-Hsa-046749	Homo sapiens	27.23	3.00e-27	114.00
IUUC-Hvu-047217	Hordeum vulgare	28.72	3.00e-40	157.00
IUUC-Itr-048114	Ictidomys tridecemlineatus	27.23	2.00e-27	115.00
IUUC-Lch-049747	Latimeria chalumnae	26.98	1.00e-23	102.00
IUUC-Lpe-051433	Leersia perrieri	28.11	2.00e-35	141.00
IUUC-Loc-052406	Lepisosteus oculatus	27.73	2.00e-30	124.00
IUUC-Lma-053153	Leptosphaeria maculans	31.37	2.00e-20	91.70
IUUC-Laf-053901	Loxodonta africana	27.69	1.00e-27	115.00
IUUC-Mcc-054990	Macaca mulatta	27.23	5.00e-27	113.00
IUUC-Meu-056844	Macropus eugenii	26.67	1.00e-24	105.00
IUUC-Mor-056975	Magnaporthe oryzae	25.49	3.00e-13	68.20
IUUC-Mga-059749	Meleagris gallopavo	27.20	4.00e-28	116.00
IUUC-Mvi-060237	Microbotryum violaceum	39.32	7.00e-64	236.00
IUUC-Mmr-061270	Microcebus murinus	27.68	3.00e-27	114.00
IUUC-Mdo-062965	Monodelphis domestica	26.05	1.00e-25	108.00
IUUC-Mmu-064081	Mus musculus	26.92	2.00e-27	114.00
IUUC-Mac-065236	Musa acuminata	28.86	1.00e-37	148.00
IUUC-Mpu-066355	Mustela putorius furo	26.97	3.00e-27	114.00
IUUC-Mlu-067630	Myotis lucifugus	27.74	1.00e-27	115.00
IUUC-Nle-069701	Nomascus leucogenys	27.23	3.00e-27	114.00
IUUC-Opr-070337	Ochotona princeps	28.48	2.00e-23	101.00
IUUC-Ont-072614	Oreochromis niloticus	27.27	3.00e-32	130.00
IUUC-Ocu-073912	Oryctolagus cuniculus	27.23	3.00e-27	114.00
IUUC-Oba-075195	Oryza barthii	28.42	2.00e-35	141.00
IUUC-Obr-076059	Oryza brachyantha	28.02	4.00e-36	143.00
IUUC-Ogl-077318	Oryza glaberrima	28.28	1.00e-36	144.00
IUUC-Ogu-078579	Oryza glumaepatula	28.61	2.00e-36	144.00
IUUC-Oin-079340	Oryza indica	28.28	1.00e-36	144.00
IUUC-Olo-080813	Oryza longistaminata	28.35	2.00e-35	141.00
IUUC-Ome-081420	Oryza meridionalis	28.68	2.00e-35	140.00
IUUC-Oni-082650	Oryza nivara	28.42	2.00e-35	141.00
IUUC-Opu-083832	Oryza punctata	28.16	6.00e-37	146.00
IUUC-Oru-084207	Oryza rufipogon	28.42	2.00e-35	141.00
IUUC-Osa-085708	Oryza sativa	28.28	1.00e-36	144.00
IUUC-Ola-087164	Oryzias latipes	28.77	5.00e-29	120.00
IUUC-Oga-088864	Otolemur garnettii	27.23	2.00e-27	114.00
IUUC-Oar-090115	Ovis aries	26.92	1.00e-27	115.00
IUUC-Ptr-091398	Pan troglodytes	27.23	4.00e-27	114.00
IUUC-Pan-092002	Papio anubis	27.23	3.00e-27	114.00
IUUC-Pma-094618	Petromyzon marinus	23.96	7.00e-21	93.20
IUUC-Ppa-095351	Physcomitrella patens	27.99	1.00e-37	148.00
IUUC-Pfo-097078	Poecilia formosa	27.44	5.00e-31	126.00
IUUC-Pab-098540	Pongo abelii	27.23	3.00e-27	114.00
IUUC-Pca-101072	Procavia capensis	27.13	3.00e-26	110.00
IUUC-Pgr-103362	Puccinia graminis	31.89	1.00e-51	194.00
IUUC-Pte-104401	Pyrenophora teres	31.37	2.00e-18	85.10
IUUC-Rno-105672	Rattus norvegicus	26.92	1.00e-27	115.00
IUUC-Sce-106242	Saccharomyces cerevisiae	24.82	1.00e-19	89.00
IUUC-Sja-107693	Schizosaccharomyces japonicus	32.41	1.00e-53	201.00
IUUC-Spo-108208	Schizosaccharomyces pombe	32.91	6.00e-54	202.00
IUUC-Smo-109168	Selaginella moellendorffii	28.64	2.00e-37	147.00
IUUC-Sit-109978	Setaria italica	27.58	3.00e-36	144.00
IUUC-Sly-111316	Solanum lycopersicum	28.53	2.00e-35	140.00
IUUC-Sbi-114189	Sorghum bicolor	27.58	5.00e-32	129.00
IUUC-Sre-115029	Sporisorium reilianum	38.57	1.00e-76	278.00
IUUC-Tgu-117514	Taeniopygia guttata	26.82	3.00e-29	120.00
IUUC-Tru-117851	Takifugu rubripes	26.23	3.00e-29	120.00
IUUC-Tsy-119140	Tarsius syrichta	26.53	1.00e-21	95.10
IUUC-Tni-120248	Tetraodon nigroviridis	26.74	7.00e-30	122.00
IUUC-Tca-121686	Theobroma cacao	29.57	2.00e-36	144.00
IUUC-Tae-123968	Triticum aestivum	29.97	2.00e-41	161.00
IUUC-Tur-126174	Triticum urartu	29.54	3.00e-39	153.00
IUUC-Tme-127079	Tuber melanosporum	30.41	7.00e-16	76.60
IUUC-Ttr-128182	Tursiops truncatus	26.15	6.00e-25	106.00
IUUC-Uma-129624	Ustilago maydis	36.48	7.00e-76	275.00
IUUC-Xtr-132193	Xenopus tropicalis	27.57	2.00e-30	124.00
IUUC-Xma-133880	Xiphophorus maculatus	27.18	2.00e-30	124.00
IUUC-Yli-134520	Yarrowia lipolytica	26.43	8.00e-25	105.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence