iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114587

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000766

Gene Name

SORBI_007G008300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb07g000880	Sb07g000880.1	Sb07g000880.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.20e-23	81.6	67	98

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           H++ v+ l+f ++  +l+sG+d g i +W l+
   Q: 67   HSSAVNVLRFsPSgEYLASGADGGGIILWKLH 98
           9**********666***************985 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MRGGTLQINW HDQQPVLSLD FHPASRRLAT AGADHDIKIW EVASDGSDDK LPTATFKYAL 60
VPNNTAHSSA VNVLRFSPSG EYLASGADGG GIILWKLHPA DDGEAWKIHK TLLFHHKDVL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCGGGGCG GGACGCTGCA GATCAACTGG CACGACCAGC AGCCGGTGCT CAGCCTCGAC 60
TTCCACCCCG CCTCCCGCCG CCTCGCCACC GCCGGCGCCG ACCACGACAT CAAGGTTGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR003143--Cyt_cd1_C
IPR001632--Gprotein_B
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00319--GPROTEINB

SMART

SM00320--WD40

Gene Ontology

GO:0033186--C:CAF-1 complex
GO:0005634--C:nucleus
GO:0042393--F:histone binding
GO:0008283--P:cell proliferation
GO:0000724--P:double-strand break repair via homologous recombination
GO:0031507--P:heterochromatin assembly
GO:0048366--P:leaf development
GO:0009933--P:meristem structural organization
GO:0006334--P:nucleosome assembly
GO:0009555--P:pollen development
GO:0010026--P:trichome differentiation

KEGG

sbi:SORBI_07g000880

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000474	Aegilops tauschii	74.16	0.00e+00	761.00
IUUC-Aml-001755	Ailuropoda melanoleuca	41.07	1.00e-83	303.00
IUUC-Atr-002674	Amborella trichopoda	55.69	4.00e-157	546.00
IUUC-Apl-003701	Anas platyrhynchos	41.03	2.00e-82	298.00
IUUC-Aca-004692	Anolis carolinensis	41.38	2.00e-85	308.00
IUUC-Aly-006286	Arabidopsis lyrata	55.05	2.00e-162	564.00
IUUC-Ath-007683	Arabidopsis thaliana	54.39	2.00e-160	558.00
IUUC-Ago-007940	Ashbya gossypii	32.67	8.00e-61	227.00
IUUC-Acl-008070	Aspergillus clavatus	40.30	8.00e-39	154.00
IUUC-Afl-008414	Aspergillus flavus	40.30	3.00e-39	155.00
IUUC-Ani-009399	Aspergillus nidulans	40.30	3.00e-38	152.00
IUUC-Aor-009937	Aspergillus oryzae	40.30	4.00e-39	155.00
IUUC-Ame-011094	Astyanax mexicanus	40.05	8.00e-87	313.00
IUUC-Bta-013423	Bos taurus	41.02	6.00e-84	304.00
IUUC-Bdi-014860	Brachypodium distachyon	75.54	0.00e+00	741.00
IUUC-Bol-016603	Brassica oleracea	54.01	5.00e-158	550.00
IUUC-Bra-017175	Brassica rapa	55.75	4.00e-154	536.00
IUUC-Cel-018272	Caenorhabditis elegans	30.67	3.00e-37	149.00
IUUC-Cja-019558	Callithrix jacchus	40.80	2.00e-84	305.00
IUUC-Cfa-020900	Canis familiaris	39.36	1.00e-81	296.00
IUUC-Cpo-022054	Cavia porcellus	40.21	5.00e-74	271.00
IUUC-Csa-023850	Chlorocebus sabaeus	40.79	1.00e-85	310.00
IUUC-Cho-024510	Choloepus hoffmanni	33.88	3.00e-42	165.00
IUUC-Cin-025178	Ciona intestinalis	37.47	5.00e-75	274.00
IUUC-Cme-027136	Cyanidioschyzon merolae	33.75	6.00e-61	227.00
IUUC-Dre-027879	Danio rerio	39.90	1.00e-85	309.00
IUUC-Dno-029335	Dasypus novemcinctus	41.63	2.00e-85	309.00
IUUC-Dor-030520	Dipodomys ordii	32.33	4.00e-53	201.00
IUUC-Dme-031838	Drosophila melanogaster	39.42	7.00e-77	281.00
IUUC-Eca-033563	Equus caballus	37.25	4.00e-86	311.00
IUUC-Fca-036052	Felis catus	41.87	1.00e-84	306.00
IUUC-Fal-037080	Ficedula albicollis	35.14	1.00e-86	313.00
IUUC-Fso-038115	Fusarium solani	40.50	5.00e-37	148.00
IUUC-Gmo-039461	Gadus morhua	39.49	2.00e-66	244.00
IUUC-Ggr-040100	Gaeumannomyces graminis	36.48	5.00e-36	145.00
IUUC-Gga-041133	Gallus gallus	34.51	4.00e-85	308.00
IUUC-Gac-041769	Gasterosteus aculeatus	41.38	1.00e-85	309.00
IUUC-Gma-043070	Glycine max	64.03	6.00e-152	530.00
IUUC-Ggo-044561	Gorilla gorilla	39.63	6.00e-86	310.00
IUUC-Hsa-046150	Homo sapiens	40.56	2.00e-86	312.00
IUUC-Hvu-047792	Hordeum vulgare	80.00	2.00e-132	464.00
IUUC-Itr-048630	Ictidomys tridecemlineatus	42.61	3.00e-86	311.00
IUUC-Kpa-049397	Komagataella pastoris	38.54	2.00e-70	258.00
IUUC-Lch-050365	Latimeria chalumnae	32.60	2.00e-51	196.00
IUUC-Lpe-050875	Leersia perrieri	73.82	0.00e+00	763.00
IUUC-Loc-052770	Lepisosteus oculatus	40.25	3.00e-86	311.00
IUUC-Laf-053505	Loxodonta africana	42.61	4.00e-86	311.00
IUUC-Mcc-054803	Macaca mulatta	40.79	1.00e-85	310.00
IUUC-Meu-056578	Macropus eugenii	42.42	3.00e-38	152.00
IUUC-Mor-057211	Magnaporthe oryzae	41.21	2.00e-37	149.00
IUUC-Mpo-057411	Magnaporthe poae	36.48	4.00e-36	145.00
IUUC-Mtr-058066	Medicago truncatula	59.63	3.00e-151	527.00
IUUC-Mga-059735	Meleagris gallopavo	41.52	2.00e-84	305.00
IUUC-Mmr-061343	Microcebus murinus	41.09	9.00e-86	310.00
IUUC-Mdo-062065	Monodelphis domestica	41.19	2.00e-84	305.00
IUUC-Mmu-063501	Mus musculus	40.89	7.00e-83	300.00
IUUC-Mac-064864	Musa acuminata	69.63	2.00e-164	571.00
IUUC-Mpu-066549	Mustela putorius furo	42.01	2.00e-86	312.00
IUUC-Mlu-067121	Myotis lucifugus	42.72	3.00e-86	311.00
IUUC-Nfi-068462	Neosartorya fischeri	40.80	1.00e-39	157.00
IUUC-Ncr-068838	Neurospora crassa	36.63	2.00e-37	150.00
IUUC-Nle-069854	Nomascus leucogenys	40.56	3.00e-86	311.00
IUUC-Opr-070803	Ochotona princeps	38.60	7.00e-73	267.00
IUUC-Ont-071642	Oreochromis niloticus	40.29	2.00e-85	308.00
IUUC-Oan-073675	Ornithorhynchus anatinus	41.98	3.00e-87	315.00
IUUC-Ocu-073863	Oryctolagus cuniculus	41.85	1.00e-83	302.00
IUUC-Oba-075682	Oryza barthii	74.66	0.00e+00	747.00
IUUC-Obr-076039	Oryza brachyantha	75.64	0.00e+00	742.00
IUUC-Ogu-078021	Oryza glumaepatula	75.83	0.00e+00	766.00
IUUC-Oin-079908	Oryza indica	64.03	3.00e-180	624.00
IUUC-Olo-081063	Oryza longistaminata	75.64	0.00e+00	764.00
IUUC-Ome-081930	Oryza meridionalis	76.03	0.00e+00	767.00
IUUC-Oni-082547	Oryza nivara	75.83	0.00e+00	765.00
IUUC-Opu-084089	Oryza punctata	75.71	0.00e+00	750.00
IUUC-Oru-084844	Oryza rufipogon	76.03	0.00e+00	768.00
IUUC-Osa-085582	Oryza sativa	76.03	0.00e+00	768.00
IUUC-Ola-087187	Oryzias latipes	40.89	2.00e-86	311.00
IUUC-Olu-087792	Ostreococcus lucimarinus	40.45	7.00e-77	280.00
IUUC-Oga-088390	Otolemur garnettii	42.11	1.00e-84	306.00
IUUC-Oar-089740	Ovis aries	39.67	3.00e-79	288.00
IUUC-Ptr-091581	Pan troglodytes	40.56	2.00e-86	312.00
IUUC-Pan-092258	Papio anubis	36.93	5.00e-74	271.00
IUUC-Psi-093761	Pelodiscus sinensis	41.28	4.00e-84	305.00
IUUC-Ppa-095428	Physcomitrella patens	54.04	4.00e-118	417.00
IUUC-Pfo-097357	Poecilia formosa	41.38	5.00e-88	317.00
IUUC-Pab-098520	Pongo abelii	40.56	5.00e-86	310.00
IUUC-Pop-099331	Populus trichocarpa	56.47	2.00e-161	560.00
IUUC-Ppe-101548	Prunus persica	53.14	7.00e-160	556.00
IUUC-Pva-103243	Pteropus vampyrus	42.58	9.00e-77	280.00
IUUC-Rno-105202	Rattus norvegicus	41.12	1.00e-84	306.00
IUUC-Sce-106250	Saccharomyces cerevisiae	34.81	7.00e-63	233.00
IUUC-Sha-107036	Sarcophilus harrisii	40.69	1.00e-84	306.00
IUUC-Sja-107912	Schizosaccharomyces japonicus	33.12	5.00e-67	247.00
IUUC-Spo-108050	Schizosaccharomyces pombe	34.56	7.00e-66	243.00
IUUC-Ssl-108607	Sclerotinia sclerotiorum	40.50	2.00e-37	149.00
IUUC-Sit-109838	Setaria italica	86.39	0.00e+00	905.00
IUUC-Sly-110872	Solanum lycopersicum	63.78	6.00e-152	529.00
IUUC-Stu-111933	Solanum tuberosum	62.81	4.00e-150	523.00
IUUC-Ssc-115462	Sus scrofa	40.05	1.00e-84	306.00
IUUC-Tgu-117186	Taeniopygia guttata	42.01	2.00e-86	312.00
IUUC-Tru-118310	Takifugu rubripes	39.37	1.00e-85	309.00
IUUC-Tsy-118927	Tarsius syrichta	36.20	1.00e-50	192.00
IUUC-Tni-120832	Tetraodon nigroviridis	38.86	7.00e-86	310.00
IUUC-Tca-121584	Theobroma cacao	57.56	5.00e-167	579.00
IUUC-Tre-122140	Trichoderma reesei	39.50	1.00e-37	150.00
IUUC-Tae-124063	Triticum aestivum	74.16	0.00e+00	760.00
IUUC-Tur-126239	Triticum urartu	73.96	0.00e+00	758.00
IUUC-Tme-127108	Tuber melanosporum	37.04	2.00e-69	256.00
IUUC-Ttr-129010	Tursiops truncatus	43.11	7.00e-86	310.00
IUUC-Vpa-130374	Vicugna pacos	41.57	2.00e-27	116.00
IUUC-Vvi-131136	Vitis vinifera	63.37	5.00e-156	543.00
IUUC-Xtr-132141	Xenopus tropicalis	41.23	1.00e-88	319.00
IUUC-Xma-133980	Xiphophorus maculatus	41.38	4.00e-86	311.00
IUUC-Yli-134457	Yarrowia lipolytica	36.11	4.00e-33	135.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence