iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Kpa-049195

Ensembl Protein ID

CAY72028

UniProt Accession

C4R8V3; C4R8V3_KOMPG

Genbank Protein ID

CAY72028.1

Protein Name

Splicing factor associated with the spliceosome

Genbank Nucleotide ID

FN392322

Gene Name

PAS_chr4_0764

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PAS_chr4_0764	CAY72028	CAY72028

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.90e-09	35.0	2	52

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 7    lCpIslelMrdPvvlp.sGitydrssIekwlasggktcPvtrqplteedlv 56
            C++s+++ ++Pv++p s   +dr ++  +l+s+++t+P+t+++ltee+l+
   Q: 2    FCSLSGKPTTNPVISPkSKRIFDRDTLLGYLKSNNNTDPITEESLTEEELI 52
           6***********************************************996 PP

Organism

Komagataella pastoris

Protein Sequence
(Fasta)

MFCSLSGKPT TNPVISPKSK RIFDRDTLLG YLKSNNNTDP ITEESLTEEE LIIVDTDPIP 60
LVKHTTATSI PSLLSSLQNE WDALALEVFQ LRKQLVTAKE ELSVALYHHD AAVRVAAKAI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTCTGTT CTTGTAAGTA TTTCAATGTC CGGTCAAAAT AGTGACGTAT ACTAACAAAT 60
CAAATAGTGT CTGGGAAACC AACTACGAAC CCGGTCATCT CTCCCAAAAG CAAAAGAATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR013915--Pre-mRNA_splic_Prp19
IPR011047--Quinoprotein_ADH-like_supfam
IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom

PROSITE

PS51698--U_BOX

Pfam

PF08606--Prp19
PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

ppa:PAS_chr4_0764

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000890	Aegilops tauschii	38.18	4.00e-20	89.70
IUUC-Aly-006002	Arabidopsis lyrata	25.05	3.00e-23	100.00
IUUC-Ath-007696	Arabidopsis thaliana	25.90	1.00e-23	102.00
IUUC-Ago-007879	Ashbya gossypii	30.21	5.00e-31	126.00
IUUC-Acl-008335	Aspergillus clavatus	25.84	6.00e-27	113.00
IUUC-Afl-008527	Aspergillus flavus	27.31	4.00e-29	120.00
IUUC-Afu-008957	Aspergillus fumigatus	25.82	1.00e-32	132.00
IUUC-Ani-009280	Aspergillus nidulans	39.29	7.00e-29	119.00
IUUC-Ang-009746	Aspergillus niger	28.82	2.00e-32	131.00
IUUC-Aor-009905	Aspergillus oryzae	28.19	4.00e-31	127.00
IUUC-Ate-010412	Aspergillus terreus	47.37	1.00e-26	111.00
IUUC-Ame-011561	Astyanax mexicanus	42.65	8.00e-17	78.60
IUUC-Bgr-012283	Blumeria graminis	30.11	3.00e-34	137.00
IUUC-Bci-013901	Botrytis cinerea	29.35	2.00e-38	151.00
IUUC-Bdi-014277	Brachypodium distachyon	25.72	8.00e-25	106.00
IUUC-Bol-016207	Brassica oleracea	26.68	6.00e-23	100.00
IUUC-Bra-017650	Brassica rapa	26.36	5.00e-22	97.10
IUUC-Cho-025065	Choloepus hoffmanni	42.65	9.00e-17	78.60
IUUC-Cgl-026507	Colletotrichum gloeosporioides	29.00	2.00e-38	151.00
IUUC-Cne-026860	Cryptococcus neoformans	26.06	4.00e-26	110.00
IUUC-Dse-031220	Dothistroma septosporum	27.09	4.00e-33	133.00
IUUC-Fox-037922	Fusarium oxysporum	28.83	1.00e-41	161.00
IUUC-Fso-038256	Fusarium solani	28.02	9.00e-42	162.00
IUUC-Ggr-039854	Gaeumannomyces graminis	40.60	3.00e-21	94.70
IUUC-Gma-044273	Glycine max	43.18	9.00e-20	89.40
IUUC-Hvu-047479	Hordeum vulgare	44.09	6.00e-23	99.00
IUUC-Lpe-050976	Leersia perrieri	26.80	6.00e-23	100.00
IUUC-Lma-053143	Leptosphaeria maculans	27.71	1.00e-33	136.00
IUUC-Mor-057215	Magnaporthe oryzae	41.54	1.00e-20	92.00
IUUC-Mpo-057419	Magnaporthe poae	40.77	2.00e-20	91.30
IUUC-Mla-059085	Melampsora laricipopulina	29.91	4.00e-24	103.00
IUUC-Mvi-060441	Microbotryum violaceum	41.43	2.00e-24	105.00
IUUC-Mac-064754	Musa acuminata	48.03	3.00e-22	97.40
IUUC-Nfi-068504	Neosartorya fischeri	26.83	2.00e-34	137.00
IUUC-Ncr-068729	Neurospora crassa	28.75	1.00e-30	125.00
IUUC-Oba-075509	Oryza barthii	26.80	1.00e-24	105.00
IUUC-Obr-076480	Oryza brachyantha	26.39	1.00e-23	102.00
IUUC-Ogl-077052	Oryza glaberrima	26.80	1.00e-24	105.00
IUUC-Ogu-078919	Oryza glumaepatula	26.80	1.00e-24	105.00
IUUC-Oin-079357	Oryza indica	27.75	5.00e-25	106.00
IUUC-Oni-082849	Oryza nivara	26.80	8.00e-25	106.00
IUUC-Opu-083243	Oryza punctata	26.80	5.00e-25	107.00
IUUC-Oru-084613	Oryza rufipogon	26.80	1.00e-24	105.00
IUUC-Osa-085407	Oryza sativa	26.80	1.00e-24	105.00
IUUC-Olu-087757	Ostreococcus lucimarinus	27.91	4.00e-30	123.00
IUUC-Pno-095115	Phaeosphaeria nodorum	27.86	8.00e-36	142.00
IUUC-Ppa-095841	Physcomitrella patens	47.69	4.00e-24	103.00
IUUC-Pop-099854	Populus trichocarpa	41.45	1.00e-19	89.00
IUUC-Pgr-103304	Puccinia graminis	26.83	8.00e-25	106.00
IUUC-Ptt-103984	Puccinia triticina	26.37	1.00e-25	109.00
IUUC-Pte-104385	Pyrenophora teres	26.77	5.00e-33	133.00
IUUC-Pyt-104697	Pyrenophora triticirepentis	26.01	7.00e-33	132.00
IUUC-Sce-106147	Saccharomyces cerevisiae	44.29	7.00e-19	86.30
IUUC-Sja-107697	Schizosaccharomyces japonicus	29.17	3.00e-30	124.00
IUUC-Spo-108315	Schizosaccharomyces pombe	27.56	3.00e-33	134.00
IUUC-Ssl-108628	Sclerotinia sclerotiorum	29.61	2.00e-38	151.00
IUUC-Smo-109648	Selaginella moellendorffii	26.50	6.00e-26	110.00
IUUC-Sly-111673	Solanum lycopersicum	45.67	2.00e-19	88.20
IUUC-Stu-112125	Solanum tuberosum	45.67	2.00e-19	88.20
IUUC-Sre-115134	Sporisorium reilianum	39.61	8.00e-23	99.80
IUUC-Tre-121920	Trichoderma reesei	28.95	7.00e-37	145.00
IUUC-Tvi-122294	Trichoderma virens	27.20	2.00e-29	121.00
IUUC-Tae-124231	Triticum aestivum	27.48	2.00e-27	115.00
IUUC-Tur-126199	Triticum urartu	37.34	1.00e-19	89.40
IUUC-Tme-127026	Tuber melanosporum	28.28	5.00e-35	139.00
IUUC-Uma-129626	Ustilago maydis	27.31	8.00e-28	116.00
IUUC-Vda-129699	Verticillium dahliae	28.90	4.00e-36	143.00
IUUC-Yli-134607	Yarrowia lipolytica	53.28	1.00e-31	126.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence