iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrt 32
           H+++++++af   +d +l+++s D+ti +WDlr 
   Q: 280  HSGPIHSVAFnphNDFILATCSTDKTIALWDLRN 313
           ***********7655778*************986 PP

Organism

Schizosaccharomyces pombe

Functional Description
(View)

Has a role in chromatin assembly and chromosome segregation. Involved in the deacetylation of histones.

Protein Sequence
(Fasta)

MAVSAVPHPS KQAQASEEGI NQEKCINEEY KIWKKNSPFL YDLIITRALE WPCMSLQWYP 60
EQQIFAEHGY TEQKMFLGVR ADVGKYLLAV ASIQLPYLNQ TVPPTTMEGA SAGDESSLRV 120

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Nucleotide Sequence
(Fasta)

TTAAGAACAC TTAGTGTGCA CATTAGCGCT GCACGCGTCT ACTCACCATC CACCAAAAAG 60
CAGATTCAAT CATTTTAACT AGAACATAAT GGCTGTATCA GCTGTTCCCC ATCCTTCCAA 120

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Sequence Source

Ensembl

Keyword

KW-0156--Chromatin regulator
KW-0181--Complete proteome
KW-0903--Direct protein sequencing
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:1990483--C:Clr6 histone deacetylase complex I''
GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0033698--C:Rpd3L complex
GO:0070210--C:Rpd3L-Expanded complex
GO:0032221--C:Rpd3S complex
GO:0006342--P:chromatin silencing
GO:0016575--P:histone deacetylation
GO:0007076--P:mitotic chromosome condensation
GO:0006351--P:transcription, DNA-templated

KEGG

spo:SPAC29A4.18

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Dor-030733	Dipodomys ordii	35.58	1.00e-68	251.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence