iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114020

Ensembl Protein ID

Sb03g004650.1

UniProt Accession

C5XNH5; C5XNH5_SORBI

Genbank Protein ID

EES02395.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G053800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g004650	Sb03g004650.1	Sb03g004650.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-06	29.0	262	291

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           ++++++a+ ++   l+++sd gt+++++lr
   Q: 262  AEIYSIALsPNvQWLAVSSDKGTVHIFSLR 291
           579******99999*************986 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MSSQVSTSRG LHPPGKLGTF ESPHAWPLPA PTAQPEAGRG DDQEVRLLSV AWNQDCGCFA 60
AGTSNGFRIF NCEPFKETFR RDLKSGGFGI VEMLFRCNIL ALVGGGSNVQ YPPNKVMIWD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GATCCCCGAC TCCCCTTCCC TCGTACGGTA CCTCCCTCTC ATCCTTCTTC TCTCTGCCCT 60
TCCCTCGCTC GCCCGCTCCC CCCCGCCCTT CGCTTGCCGT CCCACTCCCC TTGCTTCCGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

sbi:SORBI_03g004650

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000966	Aegilops tauschii	87.72	0.00e+00	747.00
IUUC-Aml-001504	Ailuropoda melanoleuca	43.68	2.00e-65	241.00
IUUC-Atr-002710	Amborella trichopoda	72.93	3.00e-173	600.00
IUUC-Apl-003741	Anas platyrhynchos	43.30	1.00e-62	232.00
IUUC-Aca-004629	Anolis carolinensis	43.48	5.00e-65	240.00
IUUC-Aly-006355	Arabidopsis lyrata	68.22	5.00e-161	559.00
IUUC-Ath-007660	Arabidopsis thaliana	72.51	3.00e-159	553.00
IUUC-Ago-007948	Ashbya gossypii	30.77	3.00e-28	119.00
IUUC-Acl-008148	Aspergillus clavatus	31.84	3.00e-43	168.00
IUUC-Afl-008562	Aspergillus flavus	30.55	5.00e-42	164.00
IUUC-Afu-008936	Aspergillus fumigatus	30.41	2.00e-41	162.00
IUUC-Ani-009254	Aspergillus nidulans	30.75	3.00e-41	161.00
IUUC-Ang-009798	Aspergillus niger	30.38	3.00e-43	168.00
IUUC-Aor-010066	Aspergillus oryzae	30.55	5.00e-42	164.00
IUUC-Ate-010266	Aspergillus terreus	31.34	5.00e-44	171.00
IUUC-Ame-011233	Astyanax mexicanus	42.93	3.00e-64	238.00
IUUC-Bta-012842	Bos taurus	42.86	9.00e-64	236.00
IUUC-Bci-013627	Botrytis cinerea	29.81	6.00e-41	160.00
IUUC-Bdi-014739	Brachypodium distachyon	88.81	0.00e+00	772.00
IUUC-Bol-015492	Brassica oleracea	67.08	9.00e-161	558.00
IUUC-Cja-018855	Callithrix jacchus	42.77	2.00e-58	218.00
IUUC-Cfa-020539	Canis familiaris	43.06	1.00e-59	222.00
IUUC-Cpo-021981	Cavia porcellus	43.41	2.00e-64	238.00
IUUC-Csa-023140	Chlorocebus sabaeus	43.41	2.00e-64	238.00
IUUC-Cin-025655	Ciona intestinalis	40.44	1.00e-58	218.00
IUUC-Csv-025977	Ciona savignyi	41.81	7.00e-65	239.00
IUUC-Cgl-026425	Colletotrichum gloeosporioides	35.29	8.00e-14	70.50
IUUC-Dre-028091	Danio rerio	42.39	6.00e-63	233.00
IUUC-Dno-029987	Dasypus novemcinctus	43.53	9.00e-64	236.00
IUUC-Dse-031215	Dothistroma septosporum	26.01	3.00e-33	135.00
IUUC-Dme-031881	Drosophila melanogaster	40.76	1.00e-63	236.00
IUUC-Eca-033323	Equus caballus	43.22	7.00e-62	229.00
IUUC-Eeu-034479	Erinaceus europaeus	38.49	2.00e-34	138.00
IUUC-Fca-035675	Felis catus	43.50	4.00e-63	233.00
IUUC-Fal-037218	Ficedula albicollis	43.21	2.00e-64	238.00
IUUC-Fso-038422	Fusarium solani	38.43	2.00e-43	169.00
IUUC-Ggr-039909	Gaeumannomyces graminis	40.98	4.00e-48	184.00
IUUC-Gga-040977	Gallus gallus	43.48	2.00e-65	241.00
IUUC-Gac-042096	Gasterosteus aculeatus	42.58	5.00e-69	253.00
IUUC-Gma-043684	Glycine max	72.70	7.00e-173	598.00
IUUC-Ggo-045610	Gorilla gorilla	35.39	2.00e-51	195.00
IUUC-Hsa-046532	Homo sapiens	43.41	2.00e-64	238.00
IUUC-Hvu-047851	Hordeum vulgare	87.77	0.00e+00	780.00
IUUC-Itr-048277	Ictidomys tridecemlineatus	43.41	2.00e-64	238.00
IUUC-Kpa-049378	Komagataella pastoris	31.41	4.00e-39	155.00
IUUC-Lch-049800	Latimeria chalumnae	43.21	2.00e-65	241.00
IUUC-Lpe-051205	Leersia perrieri	89.88	0.00e+00	786.00
IUUC-Loc-052379	Lepisosteus oculatus	43.02	2.00e-62	231.00
IUUC-Laf-054084	Loxodonta africana	40.90	2.00e-62	231.00
IUUC-Mcc-055304	Macaca mulatta	42.77	2.00e-58	218.00
IUUC-Meu-056020	Macropus eugenii	43.20	2.00e-43	168.00
IUUC-Mor-057165	Magnaporthe oryzae	35.51	1.00e-40	159.00
IUUC-Mpo-057416	Magnaporthe poae	40.57	1.00e-47	183.00
IUUC-Mtr-058536	Medicago truncatula	72.66	3.00e-180	623.00
IUUC-Mga-060051	Meleagris gallopavo	42.66	9.00e-63	232.00
IUUC-Mvi-060462	Microbotryum violaceum	33.24	2.00e-44	172.00
IUUC-Mmr-061076	Microcebus murinus	40.74	3.00e-58	218.00
IUUC-Mdo-062465	Monodelphis domestica	43.48	8.00e-65	239.00
IUUC-Mmu-063289	Mus musculus	44.61	3.00e-63	234.00
IUUC-Mac-064838	Musa acuminata	76.13	0.00e+00	647.00
IUUC-Mpu-066052	Mustela putorius furo	42.42	6.00e-63	233.00
IUUC-Mlu-067972	Myotis lucifugus	43.41	1.00e-64	239.00
IUUC-Nfi-068596	Neosartorya fischeri	39.75	2.00e-46	179.00
IUUC-Nle-069047	Nomascus leucogenys	44.38	3.00e-63	234.00
IUUC-Ont-071875	Oreochromis niloticus	42.66	2.00e-69	254.00
IUUC-Ocu-074736	Oryctolagus cuniculus	38.50	7.00e-50	189.00
IUUC-Oba-075827	Oryza barthii	89.42	0.00e+00	785.00
IUUC-Obr-076476	Oryza brachyantha	88.01	0.00e+00	775.00
IUUC-Ogl-077630	Oryza glaberrima	89.42	0.00e+00	785.00
IUUC-Ogu-078126	Oryza glumaepatula	89.18	0.00e+00	783.00
IUUC-Oin-080115	Oryza indica	89.42	0.00e+00	785.00
IUUC-Olo-080657	Oryza longistaminata	91.01	0.00e+00	725.00
IUUC-Ome-081702	Oryza meridionalis	88.86	0.00e+00	769.00
IUUC-Oni-082884	Oryza nivara	90.23	0.00e+00	744.00
IUUC-Opu-083460	Oryza punctata	89.82	0.00e+00	744.00
IUUC-Oru-084193	Oryza rufipogon	89.42	0.00e+00	785.00
IUUC-Osa-085948	Oryza sativa	89.42	0.00e+00	785.00
IUUC-Ola-086628	Oryzias latipes	42.93	2.00e-70	258.00
IUUC-Olu-087808	Ostreococcus lucimarinus	47.11	4.00e-94	337.00
IUUC-Oga-088642	Otolemur garnettii	43.41	2.00e-64	238.00
IUUC-Oar-089538	Ovis aries	42.66	2.00e-61	228.00
IUUC-Ptr-091326	Pan troglodytes	43.41	2.00e-64	238.00
IUUC-Pan-091795	Papio anubis	43.41	2.00e-64	238.00
IUUC-Psi-093258	Pelodiscus sinensis	43.30	2.00e-62	231.00
IUUC-Pno-094851	Phaeosphaeria nodorum	33.70	2.00e-39	155.00
IUUC-Ppa-095480	Physcomitrella patens	56.88	2.00e-117	415.00
IUUC-Pfo-096099	Poecilia formosa	42.66	2.00e-69	254.00
IUUC-Pab-098681	Pongo abelii	43.41	2.00e-64	238.00
IUUC-Pca-100176	Procavia capensis	32.26	3.00e-41	161.00
IUUC-Ppe-101799	Prunus persica	75.00	3.00e-180	623.00
IUUC-Pva-103006	Pteropus vampyrus	43.06	2.00e-61	228.00
IUUC-Pte-104115	Pyrenophora teres	31.43	4.00e-39	154.00
IUUC-Pyt-104488	Pyrenophora triticirepentis	27.79	4.00e-33	134.00
IUUC-Rno-106112	Rattus norvegicus	44.61	3.00e-63	234.00
IUUC-Sce-106327	Saccharomyces cerevisiae	38.46	2.00e-27	116.00
IUUC-Sha-107573	Sarcophilus harrisii	43.48	9.00e-65	239.00
IUUC-Sja-107791	Schizosaccharomyces japonicus	33.60	3.00e-43	167.00
IUUC-Spo-108254	Schizosaccharomyces pombe	34.88	2.00e-41	162.00
IUUC-Ssl-108418	Sclerotinia sclerotiorum	29.36	2.00e-42	165.00
IUUC-Smo-109446	Selaginella moellendorffii	60.82	4.00e-142	496.00
IUUC-Sit-110095	Setaria italica	94.96	0.00e+00	834.00
IUUC-Sly-111030	Solanum lycopersicum	69.40	4.00e-167	579.00
IUUC-Sar-113276	Sorex araneus	44.00	7.00e-32	129.00
IUUC-Sre-115219	Sporisorium reilianum	30.47	6.00e-36	144.00
IUUC-Ssc-116163	Sus scrofa	42.58	2.00e-63	235.00
IUUC-Tgu-116488	Taeniopygia guttata	43.02	6.00e-62	229.00
IUUC-Tru-118329	Takifugu rubripes	42.12	5.00e-75	273.00
IUUC-Tni-119729	Tetraodon nigroviridis	40.44	2.00e-69	254.00
IUUC-Tca-121732	Theobroma cacao	77.63	5.00e-165	572.00
IUUC-Tre-122255	Trichoderma reesei	32.23	4.00e-45	174.00
IUUC-Tvi-122643	Trichoderma virens	39.59	4.00e-46	177.00
IUUC-Tae-125776	Triticum aestivum	87.77	0.00e+00	780.00
IUUC-Tur-126757	Triticum urartu	87.44	0.00e+00	743.00
IUUC-Ttr-128940	Tursiops truncatus	42.46	2.00e-51	195.00
IUUC-Uma-129438	Ustilago maydis	35.79	2.00e-31	129.00
IUUC-Vda-129980	Verticillium dahliae	32.95	1.00e-41	162.00
IUUC-Vvi-131674	Vitis vinifera	70.44	7.00e-173	598.00
IUUC-Xtr-131806	Xenopus tropicalis	43.13	6.00e-65	239.00
IUUC-Xma-134275	Xiphophorus maculatus	42.66	2.00e-69	254.00
IUUC-Yli-134337	Yarrowia lipolytica	32.45	2.00e-43	169.00
IUUC-Zma-135654	Zea mays	89.66	0.00e+00	800.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence