iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Yli-134586

Ensembl Protein ID

CAG83626

UniProt Accession

Q6CI08; EIF3I_YARLI

Genbank Protein ID

CAG83626.1

Protein Name

Eukaryotic translation initiation factor 3 subunit I; Eukaryotic translation initiation factor 3 39 kDa subunit homolog

Genbank Nucleotide ID

CR382127

Gene Name

TIF34; YALI0A02695g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
YALI0_A02695g	CAG83626	CAG83626

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.60e-16	56.3	56	89

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 11   f.....sd.tllvsGsdDgtikvWDlrtgvllks 38
           f     ++ t++++Gs D t ++WD++tg+ ++s
   Q: 56   FsvdadPTtTIVATGSADQTARLWDIKTGKTIHS 89
           444546565899*****************98875 PP

Organism

Yarrowia lipolytica

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MRPILLQGHE RPLTQLKYNR EGDLLFSVAR DKTICVWYSH NGERLGTLEG SGGANFSVDA 60
DPTTTIVATG SADQTARLWD IKTGKTIHSW NFKTTVKRVE FSPDGTKLIV LSEKMMGYPG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCGACCTA TTCTACTGCA AGGCCACGAG CGACCCCTGA CCCAGCTCAA GTACAACCGG 60
GAGGGCGATC TGCTCTTCTC CGTCGCCCGA GACAAGACCA TCTGCGTGTG GTACTCTCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR027525--eIF3i
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0010494--C:cytoplasmic stress granule
GO:0022627--C:cytosolic small ribosomal subunit
GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0071540--C:eukaryotic translation initiation factor 3 complex, eIF3e
GO:0071541--C:eukaryotic translation initiation factor 3 complex, eIF3m
GO:0043614--C:multi-eIF complex
GO:0034399--C:nuclear periphery
GO:0003743--F:translation initiation factor activity
GO:0071470--P:cellular response to osmotic stress
GO:0002188--P:translation reinitiation

KEGG

yli:YALI0A02695g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000115	Aegilops tauschii	49.54	7.00e-27	112.00
IUUC-Aml-001321	Ailuropoda melanoleuca	49.39	4.00e-89	319.00
IUUC-Atr-002468	Amborella trichopoda	39.74	9.00e-44	167.00
IUUC-Apl-003841	Anas platyrhynchos	49.70	4.00e-90	322.00
IUUC-Aca-005123	Anolis carolinensis	50.15	3.00e-91	326.00
IUUC-Aly-006532	Arabidopsis lyrata	42.86	8.00e-78	281.00
IUUC-Ath-007094	Arabidopsis thaliana	42.86	3.00e-76	276.00
IUUC-Ago-008000	Ashbya gossypii	51.93	2.00e-106	376.00
IUUC-Acl-008098	Aspergillus clavatus	59.64	1.00e-118	417.00
IUUC-Afl-008494	Aspergillus flavus	59.34	1.00e-119	420.00
IUUC-Afu-009080	Aspergillus fumigatus	59.05	8.00e-118	414.00
IUUC-Ani-009230	Aspergillus nidulans	59.46	2.00e-118	416.00
IUUC-Aor-010114	Aspergillus oryzae	59.34	1.00e-119	420.00
IUUC-Ate-010285	Aspergillus terreus	59.46	4.00e-119	418.00
IUUC-Ame-011534	Astyanax mexicanus	48.01	5.00e-89	318.00
IUUC-Bgr-012121	Blumeria graminis	58.75	2.00e-115	406.00
IUUC-Bta-013143	Bos taurus	49.54	8.00e-90	321.00
IUUC-Bci-013950	Botrytis cinerea	60.83	2.00e-126	443.00
IUUC-Bdi-015019	Brachypodium distachyon	44.51	3.00e-79	286.00
IUUC-Bol-015709	Brassica oleracea	42.55	3.00e-75	273.00
IUUC-Bra-017760	Brassica rapa	42.55	4.00e-75	273.00
IUUC-Cel-018226	Caenorhabditis elegans	40.73	5.00e-72	262.00
IUUC-Cja-019741	Callithrix jacchus	49.54	4.00e-90	322.00
IUUC-Cfa-021204	Canis familiaris	49.39	2.00e-89	320.00
IUUC-Cpo-021661	Cavia porcellus	49.70	1.00e-89	320.00
IUUC-Cre-022952	Chlamydomonas reinhardtii	44.75	1.00e-81	293.00
IUUC-Csa-024038	Chlorocebus sabaeus	49.54	4.00e-90	322.00
IUUC-Cin-025597	Ciona intestinalis	46.83	6.00e-90	321.00
IUUC-Cgl-026583	Colletotrichum gloeosporioides	60.84	5.00e-119	418.00
IUUC-Cne-026838	Cryptococcus neoformans	46.97	8.00e-92	328.00
IUUC-Cme-027304	Cyanidioschyzon merolae	40.92	6.00e-68	248.00
IUUC-Dre-028567	Danio rerio	47.85	3.00e-89	319.00
IUUC-Dno-029171	Dasypus novemcinctus	49.39	1.00e-88	318.00
IUUC-Dor-030257	Dipodomys ordii	39.20	1.00e-29	121.00
IUUC-Dse-031191	Dothistroma septosporum	55.86	1.00e-107	380.00
IUUC-Dme-031879	Drosophila melanogaster	44.07	2.00e-79	286.00
IUUC-Ete-032336	Echinops telfairi	42.11	2.00e-43	166.00
IUUC-Eca-033259	Equus caballus	49.39	3.00e-89	319.00
IUUC-Eeu-035153	Erinaceus europaeus	40.00	3.00e-26	110.00
IUUC-Fca-036489	Felis catus	49.39	3.00e-89	319.00
IUUC-Fal-037485	Ficedula albicollis	49.85	9.00e-91	324.00
IUUC-Fox-037860	Fusarium oxysporum	59.94	2.00e-120	423.00
IUUC-Fso-038188	Fusarium solani	60.84	2.00e-117	413.00
IUUC-Gmo-039311	Gadus morhua	48.92	6.00e-90	322.00
IUUC-Ggr-040045	Gaeumannomyces graminis	62.95	1.00e-125	440.00
IUUC-Gga-040645	Gallus gallus	48.66	6.00e-89	318.00
IUUC-Gac-042086	Gasterosteus aculeatus	49.39	2.00e-90	323.00
IUUC-Gma-043246	Glycine max	44.04	2.00e-79	286.00
IUUC-Ggo-045578	Gorilla gorilla	49.54	4.00e-90	322.00
IUUC-Hsa-046734	Homo sapiens	49.54	4.00e-90	322.00
IUUC-Hvu-047553	Hordeum vulgare	44.82	3.00e-79	286.00
IUUC-Itr-048467	Ictidomys tridecemlineatus	49.09	6.00e-89	318.00
IUUC-Kpa-049325	Komagataella pastoris	57.61	5.00e-115	405.00
IUUC-Lch-049620	Latimeria chalumnae	48.01	3.00e-79	286.00
IUUC-Lpe-051338	Leersia perrieri	43.22	1.00e-67	248.00
IUUC-Loc-052094	Lepisosteus oculatus	43.84	2.00e-75	273.00
IUUC-Lma-053047	Leptosphaeria maculans	57.66	3.00e-117	412.00
IUUC-Laf-053801	Loxodonta africana	48.61	8.00e-86	308.00
IUUC-Mcc-055498	Macaca mulatta	43.16	5.00e-71	258.00
IUUC-Meu-056729	Macropus eugenii	45.90	5.00e-81	292.00
IUUC-Mor-057025	Magnaporthe oryzae	62.95	8.00e-124	434.00
IUUC-Mpo-057511	Magnaporthe poae	62.35	9.00e-124	434.00
IUUC-Mtr-058051	Medicago truncatula	43.73	4.00e-77	279.00
IUUC-Mla-059061	Melampsora laricipopulina	47.38	4.00e-88	315.00
IUUC-Mga-059229	Meleagris gallopavo	48.94	8.00e-88	314.00
IUUC-Mvi-060399	Microbotryum violaceum	47.60	1.00e-89	320.00
IUUC-Mmr-060764	Microcebus murinus	49.54	3.00e-90	323.00
IUUC-Mdo-062088	Monodelphis domestica	49.70	8.00e-90	321.00
IUUC-Mmu-064304	Mus musculus	49.24	7.00e-90	321.00
IUUC-Mac-065520	Musa acuminata	43.44	1.00e-77	280.00
IUUC-Mpu-066340	Mustela putorius furo	49.39	3.00e-89	319.00
IUUC-Mlu-067111	Myotis lucifugus	49.39	2.00e-89	319.00
IUUC-Nfi-068478	Neosartorya fischeri	59.05	7.00e-119	417.00
IUUC-Ncr-068820	Neurospora crassa	62.95	1.00e-124	437.00
IUUC-Nle-069903	Nomascus leucogenys	49.54	7.00e-90	321.00
IUUC-Opr-070221	Ochotona princeps	48.63	5.00e-88	315.00
IUUC-Ont-071765	Oreochromis niloticus	48.77	2.00e-90	323.00
IUUC-Oan-073660	Ornithorhynchus anatinus	45.79	8.00e-72	261.00
IUUC-Ocu-074039	Oryctolagus cuniculus	49.39	2.00e-89	320.00
IUUC-Oba-075395	Oryza barthii	38.79	2.00e-59	220.00
IUUC-Obr-076334	Oryza brachyantha	41.34	5.00e-70	255.00
IUUC-Ogl-077751	Oryza glaberrima	44.55	2.00e-76	276.00
IUUC-Ogu-078207	Oryza glumaepatula	44.07	3.00e-76	276.00
IUUC-Oin-079878	Oryza indica	44.07	3.00e-76	276.00
IUUC-Olo-080677	Oryza longistaminata	38.80	6.00e-68	248.00
IUUC-Ome-081228	Oryza meridionalis	34.90	5.00e-32	129.00
IUUC-Oni-082411	Oryza nivara	39.09	1.00e-59	220.00
IUUC-Opu-083136	Oryza punctata	44.24	7.00e-76	275.00
IUUC-Oru-084916	Oryza rufipogon	42.60	6.00e-74	268.00
IUUC-Osa-085776	Oryza sativa	44.55	2.00e-76	276.00
IUUC-Ola-087053	Oryzias latipes	49.69	3.00e-92	329.00
IUUC-Olu-087602	Ostreococcus lucimarinus	43.56	9.00e-80	288.00
IUUC-Oga-088154	Otolemur garnettii	49.09	2.00e-88	316.00
IUUC-Oar-089915	Ovis aries	49.39	4.00e-89	318.00
IUUC-Ptr-091124	Pan troglodytes	41.85	2.00e-64	237.00
IUUC-Pan-092035	Papio anubis	49.54	4.00e-90	322.00
IUUC-Psi-094096	Pelodiscus sinensis	45.66	4.00e-54	201.00
IUUC-Pno-094988	Phaeosphaeria nodorum	52.66	4.00e-100	355.00
IUUC-Ppa-095949	Physcomitrella patens	45.26	1.00e-78	283.00
IUUC-Pfo-096101	Poecilia formosa	49.69	2.00e-92	330.00
IUUC-Pab-097726	Pongo abelii	49.54	4.00e-90	322.00
IUUC-Pop-099665	Populus trichocarpa	43.12	5.00e-78	282.00
IUUC-Pca-101014	Procavia capensis	49.54	5.00e-90	322.00
IUUC-Ppe-101320	Prunus persica	43.12	5.00e-76	275.00
IUUC-Pva-102789	Pteropus vampyrus	44.68	3.00e-77	279.00
IUUC-Pgr-103479	Puccinia graminis	47.69	3.00e-88	316.00
IUUC-Ptt-103981	Puccinia triticina	47.38	9.00e-87	311.00
IUUC-Pte-104278	Pyrenophora teres	56.08	5.00e-114	401.00
IUUC-Pyt-104492	Pyrenophora triticirepentis	56.08	5.00e-114	401.00
IUUC-Rno-105867	Rattus norvegicus	45.35	2.00e-74	270.00
IUUC-Sce-106251	Saccharomyces cerevisiae	54.65	4.00e-106	375.00
IUUC-Sha-107039	Sarcophilus harrisii	49.39	4.00e-90	322.00
IUUC-Sja-107758	Schizosaccharomyces japonicus	55.76	5.00e-112	395.00
IUUC-Spo-108314	Schizosaccharomyces pombe	57.14	2.00e-113	400.00
IUUC-Ssl-108478	Sclerotinia sclerotiorum	61.14	2.00e-125	439.00
IUUC-Smo-108728	Selaginella moellendorffii	45.26	1.00e-78	283.00
IUUC-Sit-110801	Setaria italica	44.04	6.00e-78	281.00
IUUC-Sly-111326	Solanum lycopersicum	45.43	2.00e-80	290.00
IUUC-Stu-112458	Solanum tuberosum	44.82	6.00e-79	285.00
IUUC-Sbi-114063	Sorghum bicolor	44.00	1.00e-77	281.00
IUUC-Sre-115096	Sporisorium reilianum	50.00	2.00e-90	323.00
IUUC-Ssc-116080	Sus scrofa	49.54	7.00e-90	321.00
IUUC-Tgu-116988	Taeniopygia guttata	50.30	3.00e-91	326.00
IUUC-Tru-118766	Takifugu rubripes	48.77	5.00e-90	322.00
IUUC-Tni-120197	Tetraodon nigroviridis	48.47	7.00e-90	321.00
IUUC-Tca-121316	Theobroma cacao	45.43	1.00e-80	291.00
IUUC-Tre-122097	Trichoderma reesei	61.14	9.00e-121	424.00
IUUC-Tvi-122442	Trichoderma virens	60.84	1.00e-120	423.00
IUUC-Tae-125800	Triticum aestivum	44.51	1.00e-78	284.00
IUUC-Tur-126334	Triticum urartu	38.53	8.00e-63	231.00
IUUC-Tme-127038	Tuber melanosporum	61.56	3.00e-125	439.00
IUUC-Ttr-128659	Tursiops truncatus	46.50	2.00e-74	270.00
IUUC-Uma-129464	Ustilago maydis	49.11	4.00e-89	319.00
IUUC-Vda-129841	Verticillium dahliae	60.84	1.00e-121	427.00
IUUC-Vvi-131076	Vitis vinifera	43.25	7.00e-77	278.00
IUUC-Xtr-132395	Xenopus tropicalis	49.54	7.00e-90	321.00
IUUC-Xma-133383	Xiphophorus maculatus	49.69	3.00e-92	329.00
IUUC-Zma-135904	Zea mays	44.62	3.00e-78	282.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence