iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C +C+e+f    d    lpC+H++h+dC+  w       + + +CP+Cr
   Q: 224  CTVCMEEFivgGD-ATELPCKHIYHKDCIVPW------LRLNNSCPICR 265
           9*******88855.445***************......**********8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MSLSQPITRT DSAPNGAFRT FGLYWCYHCD RMVRIASSNP SEIACPRCLR QFVVEIETRQ 60
RPRFTFNHAT PPFDASPEAR LLEALSLMFE PATIGRFGAD PFLRARSRNI LEPESRPRPQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGTCTTGTGT ATAACAATTC CTTCCAACAA TGTCATTGAG TCAGCCAATA ACACGGACCG 60
ATAGTGCACC CAATGGAGCA TTTAGGACTT TTGGTCTCTA CTGGTGCTAC CATTGTGATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

ath:AT1G60360

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005575	Arabidopsis lyrata	89.60	8.00e-162	561.00
IUUC-Bol-015704	Brassica oleracea	75.47	8.00e-132	462.00
IUUC-Bra-017295	Brassica rapa	75.68	4.00e-124	436.00
IUUC-Cel-018216	Caenorhabditis elegans	43.75	2.00e-13	68.90
IUUC-Eeu-034596	Erinaceus europaeus	39.13	1.00e-14	74.30
IUUC-Gma-043875	Glycine max	41.59	2.00e-45	175.00
IUUC-Lpe-050770	Leersia perrieri	59.14	2.00e-27	115.00
IUUC-Mtr-058568	Medicago truncatula	43.48	8.00e-60	223.00
IUUC-Oin-079595	Oryza indica	62.89	2.00e-30	127.00
IUUC-Ome-081492	Oryza meridionalis	62.89	9.00e-31	126.00
IUUC-Pop-099002	Populus trichocarpa	45.10	1.00e-63	236.00
IUUC-Ppe-101439	Prunus persica	45.71	7.00e-63	233.00
IUUC-Pgr-103273	Puccinia graminis	40.00	1.00e-16	80.10
IUUC-Spo-108354	Schizosaccharomyces pombe	41.84	6.00e-19	88.20
IUUC-Sly-111021	Solanum lycopersicum	41.41	2.00e-55	208.00
IUUC-Stu-112558	Solanum tuberosum	41.23	1.00e-54	206.00
IUUC-Sar-113270	Sorex araneus	38.74	2.00e-15	76.60
IUUC-Tca-121535	Theobroma cacao	45.32	5.00e-63	234.00
IUUC-Vvi-131080	Vitis vinifera	43.07	3.00e-60	224.00
IUUC-Xma-132998	Xiphophorus maculatus	45.37	5.00e-25	107.00
IUUC-Zma-135464	Zea mays	63.37	2.00e-34	139.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence