iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA04G43060	GLYMA04G43060.2	GLYMA04G43060.2
GLYMA04G43060	GLYMA04G43060.3	GLYMA04G43060.3
GLYMA04G43060	GLYMA04G43060.4	GLYMA04G43060.4
GLYMA04G43060	GLYMA04G43060.1	GLYMA04G43060.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.30e-06	30.5	221	262

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C+e+f    +  + l+C+H++h dC+  w       + + +CP+Cr
   Q: 221  CPVCQEEFevgGE-ARELQCKHIYHSDCIVPW------LRLHNSCPVCR 262
           ********77544.889***************......**********8 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MSLSPPRERN NNGNAQARTF QLYYCFQCNR TVRAAPDNNN PTQITCPRCF GQFICEINMP 60
RPRLVVDFTT PDPSPEARLL EALSLMMDPP IRRFPGLIQP QPEELPVYHR HRRPRRRHPE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGCATCTTC TGCTATATAT TAAGAATAGC AGACGCCATT TCCAAACCCA TAATCAACTT 60
TAAGTAACAA TATGTCATTG AGTCCTCCCA GAGAGAGAAA CAACAATGGG AATGCCCAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005575	Arabidopsis lyrata	41.18	7.00e-53	200.00
IUUC-Ath-007502	Arabidopsis thaliana	41.72	1.00e-52	200.00
IUUC-Bol-015704	Brassica oleracea	43.47	3.00e-53	201.00
IUUC-Bra-017295	Brassica rapa	44.17	3.00e-52	198.00
IUUC-Lpe-051117	Leersia perrieri	67.00	8.00e-38	150.00
IUUC-Mtr-058568	Medicago truncatula	62.09	4.00e-105	374.00
IUUC-Oin-079595	Oryza indica	67.71	2.00e-33	138.00
IUUC-Ome-081151	Oryza meridionalis	65.66	1.00e-37	150.00
IUUC-Pop-099002	Populus trichocarpa	56.50	4.00e-49	188.00
IUUC-Ppe-101439	Prunus persica	47.08	3.00e-72	265.00
IUUC-Spo-108354	Schizosaccharomyces pombe	37.11	2.00e-15	77.40
IUUC-Sly-111021	Solanum lycopersicum	62.86	1.00e-47	183.00
IUUC-Stu-112558	Solanum tuberosum	60.56	8.00e-47	180.00
IUUC-Tca-121535	Theobroma cacao	46.70	1.00e-72	266.00
IUUC-Vvi-131080	Vitis vinifera	53.65	4.00e-46	178.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence