iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
TRANSFAC
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.90e-19	68.3	61	94

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           H+d+vt+la+ +d tll+sGs D+ +k++ + +g
   Q: 61   HQDGVTSLALsNDsTLLASGSIDHCVKLYKFPSG 94
           9**********999***************98766 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MKSRSLKLRE AHKVGGSAAF CSILWDHKAE HFVTSSSSDP SISVHDGLST STLPPTILRH 60
HQDGVTSLAL SNDSTLLASG SIDHCVKLYK FPSGEFQTNI TRFTLPIRVL AFNGSGSLLA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAATCAC GATCTCTAAA GCTCCGGGAA GCCCATAAAG TCGGCGGAAG CGCCGCCTTC 60
TGCTCTATCC TCTGGGACCA CAAAGCCGAA CATTTCGTCA CTTCATCTTC TTCGGATCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR024977--Apc4_WD40_dom
IPR022100--Mcl1_mid
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF12341--Mcl1_mid
PF00400--WD40

SMART

SM00320--WD40

KEGG

ath:AT3G42660

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000357	Aegilops tauschii	52.71	0.00e+00	897.00
IUUC-Aml-001369	Ailuropoda melanoleuca	28.02	1.00e-74	274.00
IUUC-Atr-002987	Amborella trichopoda	50.80	0.00e+00	866.00
IUUC-Apl-003331	Anas platyrhynchos	27.48	1.00e-71	264.00
IUUC-Aca-004285	Anolis carolinensis	26.82	2.00e-66	246.00
IUUC-Aly-005907	Arabidopsis lyrata	94.12	0.00e+00	1681.00
IUUC-Acl-008185	Aspergillus clavatus	24.06	1.00e-57	218.00
IUUC-Afl-008630	Aspergillus flavus	24.22	9.00e-61	228.00
IUUC-Afu-008921	Aspergillus fumigatus	24.32	9.00e-61	228.00
IUUC-Ani-009243	Aspergillus nidulans	23.89	2.00e-54	207.00
IUUC-Ang-009860	Aspergillus niger	23.59	6.00e-58	218.00
IUUC-Aor-010029	Aspergillus oryzae	24.22	9.00e-61	228.00
IUUC-Ate-010570	Aspergillus terreus	24.03	9.00e-61	228.00
IUUC-Bgr-012205	Blumeria graminis	24.38	5.00e-60	225.00
IUUC-Bta-012495	Bos taurus	28.61	1.00e-69	258.00
IUUC-Bci-013848	Botrytis cinerea	24.88	2.00e-56	213.00
IUUC-Bdi-014162	Brachypodium distachyon	51.27	0.00e+00	968.00
IUUC-Bol-015828	Brassica oleracea	81.05	0.00e+00	1490.00
IUUC-Bra-016792	Brassica rapa	81.36	0.00e+00	1462.00
IUUC-Cja-018995	Callithrix jacchus	28.11	3.00e-70	259.00
IUUC-Cfa-020713	Canis familiaris	27.20	2.00e-66	246.00
IUUC-Cpo-021596	Cavia porcellus	29.17	1.00e-55	211.00
IUUC-Cre-022785	Chlamydomonas reinhardtii	35.16	1.00e-32	134.00
IUUC-Csa-024080	Chlorocebus sabaeus	27.88	2.00e-72	267.00
IUUC-Cho-024295	Choloepus hoffmanni	24.32	2.00e-21	97.10
IUUC-Cin-025123	Ciona intestinalis	29.29	1.00e-38	154.00
IUUC-Csv-025859	Ciona savignyi	28.43	5.00e-42	166.00
IUUC-Cgl-026546	Colletotrichum gloeosporioides	23.48	9.00e-53	201.00
IUUC-Cne-026873	Cryptococcus neoformans	27.70	6.00e-43	169.00
IUUC-Dre-028752	Danio rerio	28.04	6.00e-40	159.00
IUUC-Dno-029844	Dasypus novemcinctus	28.30	1.00e-66	247.00
IUUC-Dse-031515	Dothistroma septosporum	24.28	2.00e-52	200.00
IUUC-Dme-031614	Drosophila melanogaster	23.93	1.00e-49	191.00
IUUC-Ete-032291	Echinops telfairi	29.96	1.00e-24	108.00
IUUC-Eca-033665	Equus caballus	26.63	2.00e-69	257.00
IUUC-Eeu-035036	Erinaceus europaeus	25.12	2.00e-27	117.00
IUUC-Fca-036209	Felis catus	27.76	1.00e-67	251.00
IUUC-Fal-037229	Ficedula albicollis	28.12	1.00e-69	257.00
IUUC-Fox-037686	Fusarium oxysporum	27.59	3.00e-25	108.00
IUUC-Fso-038120	Fusarium solani	23.66	5.00e-55	208.00
IUUC-Gmo-039627	Gadus morhua	31.71	2.00e-27	117.00
IUUC-Ggr-040058	Gaeumannomyces graminis	24.96	2.00e-51	196.00
IUUC-Gga-040825	Gallus gallus	27.97	2.00e-70	260.00
IUUC-Gac-042000	Gasterosteus aculeatus	31.06	3.00e-26	113.00
IUUC-Gma-042961	Glycine max	58.86	0.00e+00	1077.00
IUUC-Ggo-044531	Gorilla gorilla	27.64	1.00e-72	267.00
IUUC-Hsa-046362	Homo sapiens	27.61	7.00e-73	268.00
IUUC-Hvu-047719	Hordeum vulgare	50.81	0.00e+00	937.00
IUUC-Itr-048089	Ictidomys tridecemlineatus	31.05	1.00e-28	120.00
IUUC-Lch-050106	Latimeria chalumnae	32.03	1.00e-39	157.00
IUUC-Lpe-050996	Leersia perrieri	52.09	0.00e+00	954.00
IUUC-Loc-051766	Lepisosteus oculatus	30.88	3.00e-44	173.00
IUUC-Lma-053144	Leptosphaeria maculans	24.66	2.00e-47	183.00
IUUC-Laf-054285	Loxodonta africana	27.00	4.00e-65	243.00
IUUC-Mcc-054702	Macaca mulatta	28.13	2.00e-72	266.00
IUUC-Mor-057040	Magnaporthe oryzae	23.16	5.00e-52	198.00
IUUC-Mpo-057395	Magnaporthe poae	24.03	9.00e-54	204.00
IUUC-Mtr-057830	Medicago truncatula	59.13	0.00e+00	1108.00
IUUC-Mla-059152	Melampsora laricipopulina	23.62	4.00e-41	162.00
IUUC-Mga-059492	Meleagris gallopavo	30.84	4.00e-43	169.00
IUUC-Mvi-060303	Microbotryum violaceum	30.00	4.00e-38	153.00
IUUC-Mmr-061066	Microcebus murinus	27.12	5.00e-70	259.00
IUUC-Mdo-062039	Monodelphis domestica	26.71	9.00e-70	258.00
IUUC-Mmu-063620	Mus musculus	27.64	1.00e-65	244.00
IUUC-Mac-065638	Musa acuminata	59.39	0.00e+00	983.00
IUUC-Mpu-066212	Mustela putorius furo	29.49	2.00e-72	267.00
IUUC-Mlu-068167	Myotis lucifugus	29.61	4.00e-71	262.00
IUUC-Nfi-068338	Neosartorya fischeri	24.85	2.00e-61	229.00
IUUC-Ncr-068798	Neurospora crassa	23.84	4.00e-53	202.00
IUUC-Nle-069987	Nomascus leucogenys	28.55	3.00e-74	273.00
IUUC-Opr-070369	Ochotona princeps	30.09	3.00e-23	103.00
IUUC-Ont-072317	Oreochromis niloticus	28.78	1.00e-45	178.00
IUUC-Oan-073516	Ornithorhynchus anatinus	30.54	1.00e-21	96.30
IUUC-Ocu-074529	Oryctolagus cuniculus	27.87	8.00e-74	271.00
IUUC-Oba-075044	Oryza barthii	50.71	0.00e+00	901.00
IUUC-Obr-076499	Oryza brachyantha	52.62	0.00e+00	919.00
IUUC-Ogl-077757	Oryza glaberrima	50.81	0.00e+00	902.00
IUUC-Ogu-078878	Oryza glumaepatula	50.81	0.00e+00	902.00
IUUC-Oin-079900	Oryza indica	50.65	0.00e+00	902.00
IUUC-Olo-080741	Oryza longistaminata	57.33	0.00e+00	869.00
IUUC-Ome-081734	Oryza meridionalis	50.50	0.00e+00	897.00
IUUC-Oni-082656	Oryza nivara	50.55	0.00e+00	900.00
IUUC-Opu-083312	Oryza punctata	51.69	0.00e+00	912.00
IUUC-Oru-084507	Oryza rufipogon	55.87	0.00e+00	892.00
IUUC-Osa-085329	Oryza sativa	51.35	0.00e+00	806.00
IUUC-Ola-086433	Oryzias latipes	28.37	1.00e-74	273.00
IUUC-Olu-087690	Ostreococcus lucimarinus	35.91	5.00e-69	254.00
IUUC-Oga-088410	Otolemur garnettii	30.19	1.00e-68	254.00
IUUC-Oar-089993	Ovis aries	28.59	8.00e-68	251.00
IUUC-Ptr-091145	Pan troglodytes	27.76	3.00e-77	283.00
IUUC-Pan-092500	Papio anubis	28.13	2.00e-72	266.00
IUUC-Psi-093984	Pelodiscus sinensis	29.51	5.00e-43	169.00
IUUC-Pma-094567	Petromyzon marinus	27.22	5.00e-47	181.00
IUUC-Pno-095002	Phaeosphaeria nodorum	25.36	1.00e-41	164.00
IUUC-Pfo-097387	Poecilia formosa	30.10	6.00e-46	179.00
IUUC-Pab-097803	Pongo abelii	28.21	2.00e-72	267.00
IUUC-Pop-099165	Populus trichocarpa	60.86	0.00e+00	1104.00
IUUC-Ppe-102022	Prunus persica	58.85	0.00e+00	1093.00
IUUC-Pva-102389	Pteropus vampyrus	26.25	5.00e-56	212.00
IUUC-Pgr-103635	Puccinia graminis	24.21	6.00e-48	185.00
IUUC-Ptt-103730	Puccinia triticina	24.85	3.00e-45	176.00
IUUC-Pte-104320	Pyrenophora teres	25.42	1.00e-46	181.00
IUUC-Pyt-104622	Pyrenophora triticirepentis	25.10	1.00e-46	181.00
IUUC-Rno-105689	Rattus norvegicus	28.52	3.00e-67	249.00
IUUC-Sha-107448	Sarcophilus harrisii	27.52	8.00e-74	271.00
IUUC-Sja-107702	Schizosaccharomyces japonicus	25.49	3.00e-57	216.00
IUUC-Spo-108360	Schizosaccharomyces pombe	26.41	9.00e-52	197.00
IUUC-Ssl-108529	Sclerotinia sclerotiorum	25.65	7.00e-52	198.00
IUUC-Smo-109337	Selaginella moellendorffii	42.15	7.00e-173	600.00
IUUC-Sit-110790	Setaria italica	51.26	0.00e+00	889.00
IUUC-Sly-111470	Solanum lycopersicum	56.95	0.00e+00	1051.00
IUUC-Stu-111945	Solanum tuberosum	56.88	0.00e+00	1079.00
IUUC-Sar-113075	Sorex araneus	28.34	6.00e-42	165.00
IUUC-Sbi-114822	Sorghum bicolor	54.13	0.00e+00	799.00
IUUC-Sre-114913	Sporisorium reilianum	25.89	3.00e-52	200.00
IUUC-Ssc-116073	Sus scrofa	27.04	5.00e-68	252.00
IUUC-Tgu-117253	Taeniopygia guttata	28.84	1.00e-70	260.00
IUUC-Tru-117741	Takifugu rubripes	29.92	2.00e-41	163.00
IUUC-Tsy-118834	Tarsius syrichta	32.35	9.00e-37	148.00
IUUC-Tni-120726	Tetraodon nigroviridis	28.38	4.00e-78	285.00
IUUC-Tca-121655	Theobroma cacao	61.67	0.00e+00	1139.00
IUUC-Tre-121921	Trichoderma reesei	22.91	3.00e-48	186.00
IUUC-Tvi-122540	Trichoderma virens	23.04	4.00e-48	186.00
IUUC-Tae-123225	Triticum aestivum	52.20	0.00e+00	946.00
IUUC-Tur-126398	Triticum urartu	53.52	0.00e+00	894.00
IUUC-Tme-127075	Tuber melanosporum	26.68	5.00e-33	135.00
IUUC-Tbe-128002	Tupaia belangeri	27.34	5.00e-23	103.00
IUUC-Ttr-129101	Tursiops truncatus	27.46	2.00e-70	260.00
IUUC-Uma-129374	Ustilago maydis	24.52	5.00e-51	196.00
IUUC-Vda-129719	Verticillium dahliae	25.61	3.00e-54	206.00
IUUC-Vpa-130039	Vicugna pacos	26.52	3.00e-66	246.00
IUUC-Vvi-131442	Vitis vinifera	59.96	0.00e+00	1093.00
IUUC-Xtr-132599	Xenopus tropicalis	26.24	3.00e-69	256.00
IUUC-Xma-132991	Xiphophorus maculatus	28.70	1.00e-71	264.00
IUUC-Zma-135846	Zea mays	50.97	0.00e+00	933.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence