iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-116073

Ensembl Protein ID

ENSSSCP00000020519.1

UniProt Accession

I3L908; I3L908_PIG

Genbank Protein ID

ENSSSCP00000020519

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU480474

Gene Name

WDHD1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000005052.2	ENSSSCT00000027382.1	ENSSSCP00000020519.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.70e-11	42.5	71	107

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtl.lvsGsdDgtikvWDlrtgvl 35
           gH ++v +l+f + ++ l+s+s Dg++kvW ++++++
   Q: 71   GHDAPVLSLSFdPKDIfLASSSCDGSVKVWQISDQTC 107
           8**********7444447************9998887 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

NGKLVTAVSN NTIQVHTFPE GVPDGILTRF TTNANHVIFN EDGTKIAAGS SDFLVKVVDV 60
MDCSQQKTFR GHDAPVLSLS FDPKDIFLAS SSCDGSVKVW QISDQTCAIS WPLLQKCNDV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATGGGAAAC TGGTCACTGC AGTATCTAAC AATACTATTC AGGTGCACAC ATTTCCTGAA 60
GGAGTTCCAG ATGGTATATT AACTCGCTTT ACTACAAATG CAAACCATGT GATCTTTAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0238--DNA-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR009071--HMG_box_dom
IPR022100--Mcl1_mid
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50118--HMG_BOX_2
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF12341--Mcl1_mid
PF00400--WD40

SMART

SM00398--HMG
SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0003677--F:DNA binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000357	Aegilops tauschii	28.57	5.00e-74	272.00
IUUC-Aml-001369	Ailuropoda melanoleuca	86.61	0.00e+00	1826.00
IUUC-Atr-002987	Amborella trichopoda	28.86	3.00e-82	299.00
IUUC-Apl-003331	Anas platyrhynchos	66.64	0.00e+00	1371.00
IUUC-Aca-004285	Anolis carolinensis	63.04	0.00e+00	1316.00
IUUC-Aly-005907	Arabidopsis lyrata	28.75	6.00e-68	252.00
IUUC-Ath-007037	Arabidopsis thaliana	28.32	7.00e-67	248.00
IUUC-Acl-008185	Aspergillus clavatus	22.72	3.00e-48	186.00
IUUC-Afl-008630	Aspergillus flavus	22.21	7.00e-50	192.00
IUUC-Afu-008921	Aspergillus fumigatus	23.33	2.00e-50	194.00
IUUC-Ani-009243	Aspergillus nidulans	24.11	8.00e-29	122.00
IUUC-Ang-009860	Aspergillus niger	22.94	8.00e-48	185.00
IUUC-Aor-010029	Aspergillus oryzae	22.21	7.00e-50	192.00
IUUC-Ate-010570	Aspergillus terreus	22.97	2.00e-52	200.00
IUUC-Bgr-012205	Blumeria graminis	25.49	4.00e-33	136.00
IUUC-Bta-012495	Bos taurus	87.73	0.00e+00	1802.00
IUUC-Bci-013848	Botrytis cinerea	24.23	1.00e-23	105.00
IUUC-Bdi-014162	Brachypodium distachyon	27.01	3.00e-76	280.00
IUUC-Bol-015828	Brassica oleracea	26.11	1.00e-63	238.00
IUUC-Bra-016792	Brassica rapa	26.68	3.00e-61	229.00
IUUC-Cja-018995	Callithrix jacchus	85.79	0.00e+00	1800.00
IUUC-Cfa-020713	Canis familiaris	86.01	0.00e+00	1788.00
IUUC-Cpo-021596	Cavia porcellus	72.84	0.00e+00	1477.00
IUUC-Cre-022785	Chlamydomonas reinhardtii	29.61	7.00e-18	86.30
IUUC-Csa-024080	Chlorocebus sabaeus	86.34	0.00e+00	1765.00
IUUC-Cho-024295	Choloepus hoffmanni	77.08	2.00e-173	603.00
IUUC-Cin-025123	Ciona intestinalis	48.09	8.00e-119	421.00
IUUC-Csv-025859	Ciona savignyi	48.01	1.00e-116	414.00
IUUC-Cgl-026546	Colletotrichum gloeosporioides	25.06	4.00e-28	119.00
IUUC-Cne-026873	Cryptococcus neoformans	29.34	7.00e-47	182.00
IUUC-Dre-028752	Danio rerio	64.81	0.00e+00	1023.00
IUUC-Dno-029844	Dasypus novemcinctus	76.16	0.00e+00	1576.00
IUUC-Dse-031515	Dothistroma septosporum	24.33	2.00e-47	183.00
IUUC-Dme-031614	Drosophila melanogaster	29.08	3.00e-83	303.00
IUUC-Ete-032291	Echinops telfairi	84.11	2.00e-155	543.00
IUUC-Eca-033665	Equus caballus	87.45	0.00e+00	1857.00
IUUC-Eeu-035036	Erinaceus europaeus	70.50	0.00e+00	1092.00
IUUC-Fca-036209	Felis catus	86.60	0.00e+00	1835.00
IUUC-Fal-037229	Ficedula albicollis	64.88	0.00e+00	1381.00
IUUC-Fox-037686	Fusarium oxysporum	24.89	2.00e-21	96.30
IUUC-Fso-038120	Fusarium solani	23.22	1.00e-28	121.00
IUUC-Gmo-039627	Gadus morhua	56.22	2.00e-138	486.00
IUUC-Ggr-040058	Gaeumannomyces graminis	26.56	4.00e-25	110.00
IUUC-Gga-040825	Gallus gallus	67.90	0.00e+00	1459.00
IUUC-Gac-042000	Gasterosteus aculeatus	46.04	0.00e+00	855.00
IUUC-Gma-042961	Glycine max	26.64	1.00e-70	261.00
IUUC-Ggo-044531	Gorilla gorilla	86.25	0.00e+00	1805.00
IUUC-Hsa-046362	Homo sapiens	86.81	0.00e+00	1806.00
IUUC-Hvu-047719	Hordeum vulgare	28.20	3.00e-74	273.00
IUUC-Itr-048089	Ictidomys tridecemlineatus	86.72	0.00e+00	669.00
IUUC-Lch-050106	Latimeria chalumnae	60.00	0.00e+00	1209.00
IUUC-Lpe-050996	Leersia perrieri	27.87	9.00e-75	275.00
IUUC-Loc-051766	Lepisosteus oculatus	57.35	0.00e+00	1175.00
IUUC-Lma-053144	Leptosphaeria maculans	24.92	2.00e-20	94.00
IUUC-Laf-054285	Loxodonta africana	86.30	0.00e+00	1742.00
IUUC-Mcc-054702	Macaca mulatta	86.52	0.00e+00	1772.00
IUUC-Meu-056634	Macropus eugenii	61.22	6.00e-165	574.00
IUUC-Mor-057040	Magnaporthe oryzae	24.71	1.00e-28	121.00
IUUC-Mpo-057395	Magnaporthe poae	26.16	3.00e-25	110.00
IUUC-Mtr-057830	Medicago truncatula	26.20	3.00e-73	270.00
IUUC-Mla-059152	Melampsora laricipopulina	22.32	2.00e-24	108.00
IUUC-Mga-059492	Meleagris gallopavo	67.04	0.00e+00	1394.00
IUUC-Mvi-060303	Microbotryum violaceum	27.48	1.00e-40	162.00
IUUC-Mmr-061066	Microcebus murinus	84.87	0.00e+00	1778.00
IUUC-Mdo-062039	Monodelphis domestica	72.74	0.00e+00	1528.00
IUUC-Mmu-063620	Mus musculus	79.31	0.00e+00	1677.00
IUUC-Mac-065638	Musa acuminata	27.66	1.00e-77	284.00
IUUC-Mpu-066212	Mustela putorius furo	82.02	0.00e+00	1739.00
IUUC-Mlu-068167	Myotis lucifugus	85.58	0.00e+00	1759.00
IUUC-Nfi-068338	Neosartorya fischeri	24.05	2.00e-51	197.00
IUUC-Ncr-068798	Neurospora crassa	24.24	3.00e-22	100.00
IUUC-Nle-069987	Nomascus leucogenys	86.36	0.00e+00	1790.00
IUUC-Opr-070369	Ochotona princeps	80.46	3.00e-131	462.00
IUUC-Ont-072317	Oreochromis niloticus	55.83	0.00e+00	1123.00
IUUC-Oan-073516	Ornithorhynchus anatinus	80.79	9.00e-103	365.00
IUUC-Ocu-074529	Oryctolagus cuniculus	83.08	0.00e+00	1787.00
IUUC-Oba-075044	Oryza barthii	27.38	4.00e-70	259.00
IUUC-Obr-076499	Oryza brachyantha	28.13	4.00e-68	253.00
IUUC-Ogl-077757	Oryza glaberrima	27.38	8.00e-70	258.00
IUUC-Ogu-078878	Oryza glumaepatula	27.63	7.00e-71	262.00
IUUC-Oin-079900	Oryza indica	27.51	7.00e-70	258.00
IUUC-Olo-080741	Oryza longistaminata	27.35	1.00e-69	258.00
IUUC-Ome-081734	Oryza meridionalis	27.76	9.00e-71	261.00
IUUC-Oni-082656	Oryza nivara	27.38	7.00e-70	259.00
IUUC-Opu-083312	Oryza punctata	27.78	1.00e-70	261.00
IUUC-Oru-084507	Oryza rufipogon	27.61	2.00e-70	261.00
IUUC-Osa-085329	Oryza sativa	27.22	2.00e-62	233.00
IUUC-Ola-086433	Oryzias latipes	63.23	0.00e+00	982.00
IUUC-Olu-087690	Ostreococcus lucimarinus	28.18	8.00e-41	161.00
IUUC-Oga-088410	Otolemur garnettii	79.21	0.00e+00	1618.00
IUUC-Oar-089993	Ovis aries	87.17	0.00e+00	1804.00
IUUC-Ptr-091145	Pan troglodytes	86.62	0.00e+00	1826.00
IUUC-Pan-092500	Papio anubis	86.72	0.00e+00	1772.00
IUUC-Psi-093984	Pelodiscus sinensis	70.13	0.00e+00	1481.00
IUUC-Pma-094567	Petromyzon marinus	49.76	9.00e-171	593.00
IUUC-Pno-095002	Phaeosphaeria nodorum	24.35	2.00e-16	81.30
IUUC-Pfo-097387	Poecilia formosa	55.75	0.00e+00	1018.00
IUUC-Pab-097803	Pongo abelii	86.44	0.00e+00	1774.00
IUUC-Pop-099165	Populus trichocarpa	28.31	2.00e-71	264.00
IUUC-Pca-100989	Procavia capensis	85.35	8.00e-137	481.00
IUUC-Ppe-102022	Prunus persica	31.70	2.00e-44	174.00
IUUC-Pva-102389	Pteropus vampyrus	81.86	0.00e+00	1686.00
IUUC-Pgr-103635	Puccinia graminis	25.97	7.00e-33	135.00
IUUC-Ptt-103730	Puccinia triticina	26.94	2.00e-30	128.00
IUUC-Pte-104320	Pyrenophora teres	23.28	3.00e-35	143.00
IUUC-Pyt-104622	Pyrenophora triticirepentis	23.08	5.00e-34	139.00
IUUC-Rno-105689	Rattus norvegicus	78.28	0.00e+00	1642.00
IUUC-Sha-107448	Sarcophilus harrisii	73.79	0.00e+00	1556.00
IUUC-Sja-107702	Schizosaccharomyces japonicus	25.39	2.00e-42	167.00
IUUC-Spo-108360	Schizosaccharomyces pombe	24.97	1.00e-45	177.00
IUUC-Ssl-108529	Sclerotinia sclerotiorum	24.74	8.00e-21	95.50
IUUC-Smo-109337	Selaginella moellendorffii	28.07	3.00e-62	233.00
IUUC-Sit-110790	Setaria italica	29.44	1.00e-38	155.00
IUUC-Sly-111470	Solanum lycopersicum	26.27	6.00e-72	265.00
IUUC-Stu-111945	Solanum tuberosum	26.21	2.00e-74	273.00
IUUC-Sar-113075	Sorex araneus	73.80	0.00e+00	1366.00
IUUC-Sbi-114822	Sorghum bicolor	29.78	3.00e-64	239.00
IUUC-Sre-114913	Sporisorium reilianum	24.07	8.00e-35	142.00
IUUC-Tgu-117253	Taeniopygia guttata	70.48	0.00e+00	1152.00
IUUC-Tru-117741	Takifugu rubripes	65.37	0.00e+00	996.00
IUUC-Tsy-118834	Tarsius syrichta	89.87	0.00e+00	743.00
IUUC-Tni-120726	Tetraodon nigroviridis	55.38	0.00e+00	1098.00
IUUC-Tca-121655	Theobroma cacao	27.50	3.00e-77	283.00
IUUC-Tre-121921	Trichoderma reesei	24.01	2.00e-28	120.00
IUUC-Tvi-122540	Trichoderma virens	23.36	8.00e-27	115.00
IUUC-Tae-123766	Triticum aestivum	28.27	5.00e-75	275.00
IUUC-Tur-126398	Triticum urartu	28.25	1.00e-72	267.00
IUUC-Tme-127075	Tuber melanosporum	23.51	5.00e-52	199.00
IUUC-Tbe-128002	Tupaia belangeri	67.24	2.00e-125	443.00
IUUC-Ttr-129101	Tursiops truncatus	85.11	0.00e+00	1679.00
IUUC-Uma-129374	Ustilago maydis	24.10	3.00e-26	114.00
IUUC-Vda-129719	Verticillium dahliae	24.24	4.00e-23	103.00
IUUC-Vpa-130039	Vicugna pacos	88.20	0.00e+00	1769.00
IUUC-Vvi-131442	Vitis vinifera	26.44	3.00e-61	229.00
IUUC-Xtr-132599	Xenopus tropicalis	60.53	0.00e+00	1295.00
IUUC-Xma-132991	Xiphophorus maculatus	58.40	0.00e+00	822.00
IUUC-Zma-135846	Zea mays	27.94	4.00e-71	263.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence