iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126398

Ensembl Protein ID

TRIUR3_14637-P1

UniProt Accession

M7ZCL0; M7ZCL0_TRIUA

Genbank Protein ID

EMS50130.1

Protein Name

WD repeat and HMG-box DNA-binding protein 1

Genbank Nucleotide ID

KD234486

Gene Name

TRIUR3_14637

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_14637	TRIUR3_14637-T1	TRIUR3_14637-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.40e-14	53.1	152	184

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           H+ ++++l++ ++ ++l++++ D ++ vWD+++
   Q: 152  HEQPICSLCWsPNgRYLATAGLDRQVLVWDVKS 184
           99*********777****************976 PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

MSPNFFPDGT FQSNVARFTL PIRSLAFNKK GALLAAAGDD DGIKLIATVD NTISKVLKGH 60
KGSVTGLAFD PKNDYLASID SFGTVIFWDL CLGSEARSLT RVAPTFGSDH SVKNTLCWSP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTCCGA ATTTCTTTCC AGACGGCACG TTCCAGAGCA ACGTTGCCCG GTTCACCCTC 60
CCGATCCGGT CACTGGCGTT CAACAAGAAG GGCGCCCTTT TGGCCGCCGC CGGCGATGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0238--DNA-binding
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR022100--Mcl1_mid
IPR002469--Peptidase_S9B_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12341--Mcl1_mid
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0003677--F:DNA binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000357	Aegilops tauschii	97.37	0.00e+00	1760.00
IUUC-Aml-001369	Ailuropoda melanoleuca	28.66	7.00e-77	281.00
IUUC-Atr-002987	Amborella trichopoda	52.70	0.00e+00	927.00
IUUC-Apl-003331	Anas platyrhynchos	28.74	9.00e-78	284.00
IUUC-Aca-004285	Anolis carolinensis	31.02	8.00e-48	185.00
IUUC-Aly-005907	Arabidopsis lyrata	59.13	0.00e+00	833.00
IUUC-Ath-007037	Arabidopsis thaliana	53.29	0.00e+00	833.00
IUUC-Acl-008185	Aspergillus clavatus	24.47	2.00e-58	219.00
IUUC-Afl-008630	Aspergillus flavus	23.94	2.00e-59	223.00
IUUC-Afu-008921	Aspergillus fumigatus	25.35	1.00e-62	233.00
IUUC-Ani-009243	Aspergillus nidulans	24.88	3.00e-55	209.00
IUUC-Ang-009860	Aspergillus niger	23.74	1.00e-61	230.00
IUUC-Aor-010029	Aspergillus oryzae	23.94	2.00e-59	223.00
IUUC-Ate-010570	Aspergillus terreus	24.55	7.00e-62	231.00
IUUC-Bgr-012205	Blumeria graminis	24.61	1.00e-56	213.00
IUUC-Bta-012495	Bos taurus	29.37	4.00e-68	252.00
IUUC-Bci-013848	Botrytis cinerea	25.06	1.00e-58	220.00
IUUC-Bdi-014162	Brachypodium distachyon	83.04	0.00e+00	1535.00
IUUC-Bol-015828	Brassica oleracea	56.77	0.00e+00	828.00
IUUC-Bra-016792	Brassica rapa	52.57	0.00e+00	816.00
IUUC-Cja-018995	Callithrix jacchus	28.29	1.00e-70	261.00
IUUC-Cfa-020713	Canis familiaris	28.25	1.00e-69	257.00
IUUC-Cpo-021596	Cavia porcellus	27.87	4.00e-60	226.00
IUUC-Cre-022785	Chlamydomonas reinhardtii	33.19	6.00e-27	115.00
IUUC-Csa-024080	Chlorocebus sabaeus	29.52	1.00e-75	277.00
IUUC-Cho-024295	Choloepus hoffmanni	26.60	4.00e-22	99.40
IUUC-Cin-025123	Ciona intestinalis	28.72	1.00e-39	157.00
IUUC-Csv-025859	Ciona savignyi	28.25	5.00e-42	165.00
IUUC-Cgl-026546	Colletotrichum gloeosporioides	25.52	2.00e-57	216.00
IUUC-Cne-026873	Cryptococcus neoformans	29.90	2.00e-49	190.00
IUUC-Dre-028752	Danio rerio	29.06	2.00e-46	180.00
IUUC-Dno-029844	Dasypus novemcinctus	29.43	5.00e-69	255.00
IUUC-Dse-031515	Dothistroma septosporum	25.92	1.00e-54	207.00
IUUC-Dme-031614	Drosophila melanogaster	24.47	6.00e-41	161.00
IUUC-Ete-032291	Echinops telfairi	33.33	1.00e-31	131.00
IUUC-Eca-033665	Equus caballus	29.43	8.00e-75	274.00
IUUC-Eeu-035036	Erinaceus europaeus	29.18	1.00e-28	120.00
IUUC-Fca-036209	Felis catus	27.79	4.00e-69	255.00
IUUC-Fal-037229	Ficedula albicollis	28.51	8.00e-75	274.00
IUUC-Fox-037686	Fusarium oxysporum	27.08	9.00e-23	100.00
IUUC-Fso-038120	Fusarium solani	23.80	7.00e-54	204.00
IUUC-Gmo-039627	Gadus morhua	29.20	5.00e-34	139.00
IUUC-Ggr-040058	Gaeumannomyces graminis	24.87	3.00e-52	199.00
IUUC-Gga-040825	Gallus gallus	28.78	2.00e-76	280.00
IUUC-Gac-042000	Gasterosteus aculeatus	25.84	3.00e-52	199.00
IUUC-Gma-044023	Glycine max	61.59	0.00e+00	927.00
IUUC-Ggo-044531	Gorilla gorilla	29.30	7.00e-76	278.00
IUUC-Hsa-046362	Homo sapiens	29.43	2.00e-76	280.00
IUUC-Hvu-047719	Hordeum vulgare	93.86	0.00e+00	1650.00
IUUC-Itr-048089	Ictidomys tridecemlineatus	29.84	2.00e-27	116.00
IUUC-Lch-050106	Latimeria chalumnae	27.32	7.00e-72	265.00
IUUC-Lpe-050996	Leersia perrieri	77.85	0.00e+00	1431.00
IUUC-Loc-051766	Lepisosteus oculatus	29.57	3.00e-46	179.00
IUUC-Lma-053144	Leptosphaeria maculans	27.47	2.00e-50	193.00
IUUC-Laf-054285	Loxodonta africana	28.29	2.00e-68	253.00
IUUC-Mcc-054702	Macaca mulatta	29.17	2.00e-75	276.00
IUUC-Meu-056634	Macropus eugenii	26.15	4.00e-20	93.20
IUUC-Mor-057040	Magnaporthe oryzae	24.14	4.00e-54	205.00
IUUC-Mpo-057395	Magnaporthe poae	24.46	6.00e-54	205.00
IUUC-Mtr-057830	Medicago truncatula	61.26	0.00e+00	957.00
IUUC-Mla-059152	Melampsora laricipopulina	23.87	5.00e-46	179.00
IUUC-Mga-059492	Meleagris gallopavo	29.41	3.00e-46	179.00
IUUC-Mvi-060303	Microbotryum violaceum	28.61	2.00e-39	157.00
IUUC-Mmr-061066	Microcebus murinus	28.50	6.00e-75	275.00
IUUC-Mdo-062039	Monodelphis domestica	26.84	3.00e-75	276.00
IUUC-Mmu-063620	Mus musculus	29.90	4.00e-71	262.00
IUUC-Mac-065638	Musa acuminata	68.53	0.00e+00	1049.00
IUUC-Mpu-066212	Mustela putorius furo	30.19	3.00e-72	266.00
IUUC-Mlu-068167	Myotis lucifugus	30.68	4.00e-73	269.00
IUUC-Nfi-068338	Neosartorya fischeri	25.32	6.00e-63	234.00
IUUC-Ncr-068798	Neurospora crassa	26.17	3.00e-53	202.00
IUUC-Nle-069987	Nomascus leucogenys	29.50	2.00e-77	283.00
IUUC-Opr-070369	Ochotona princeps	31.02	5.00e-27	115.00
IUUC-Ont-072317	Oreochromis niloticus	31.11	2.00e-52	200.00
IUUC-Oan-073516	Ornithorhynchus anatinus	32.80	2.00e-22	98.20
IUUC-Ocu-074529	Oryctolagus cuniculus	28.87	1.00e-76	280.00
IUUC-Oba-075044	Oryza barthii	78.24	0.00e+00	1408.00
IUUC-Obr-076499	Oryza brachyantha	76.96	0.00e+00	1373.00
IUUC-Ogl-077757	Oryza glaberrima	78.05	0.00e+00	1376.00
IUUC-Ogu-078878	Oryza glumaepatula	78.35	0.00e+00	1409.00
IUUC-Oin-079900	Oryza indica	78.15	0.00e+00	1413.00
IUUC-Olo-080741	Oryza longistaminata	76.16	0.00e+00	1365.00
IUUC-Ome-081734	Oryza meridionalis	78.13	0.00e+00	1408.00
IUUC-Oni-082656	Oryza nivara	78.15	0.00e+00	1411.00
IUUC-Opu-083312	Oryza punctata	79.19	0.00e+00	1430.00
IUUC-Oru-084507	Oryza rufipogon	76.24	0.00e+00	1365.00
IUUC-Osa-085329	Oryza sativa	77.84	0.00e+00	1343.00
IUUC-Ola-086433	Oryzias latipes	28.85	1.00e-79	290.00
IUUC-Olu-087690	Ostreococcus lucimarinus	37.25	1.00e-73	270.00
IUUC-Oga-088410	Otolemur garnettii	28.97	8.00e-69	254.00
IUUC-Oar-089993	Ovis aries	27.97	1.00e-67	250.00
IUUC-Ptr-091145	Pan troglodytes	29.43	8.00e-81	294.00
IUUC-Pan-092500	Papio anubis	29.56	7.00e-76	278.00
IUUC-Psi-093984	Pelodiscus sinensis	29.68	2.00e-49	190.00
IUUC-Pma-094567	Petromyzon marinus	28.19	2.00e-47	182.00
IUUC-Pno-095002	Phaeosphaeria nodorum	27.62	3.00e-42	166.00
IUUC-Pfo-097387	Poecilia formosa	33.25	2.00e-53	203.00
IUUC-Pab-097803	Pongo abelii	29.04	4.00e-73	268.00
IUUC-Pop-099165	Populus trichocarpa	56.58	0.00e+00	984.00
IUUC-Pca-100989	Procavia capensis	25.64	4.00e-20	92.80
IUUC-Ppe-102022	Prunus persica	56.77	0.00e+00	980.00
IUUC-Pva-102389	Pteropus vampyrus	27.28	1.00e-63	237.00
IUUC-Pgr-103635	Puccinia graminis	25.37	2.00e-54	206.00
IUUC-Ptt-103730	Puccinia triticina	25.00	9.00e-46	178.00
IUUC-Pte-104320	Pyrenophora teres	27.16	4.00e-48	185.00
IUUC-Pyt-104622	Pyrenophora triticirepentis	26.44	6.00e-46	178.00
IUUC-Rno-105689	Rattus norvegicus	30.04	1.00e-73	270.00
IUUC-Sha-107448	Sarcophilus harrisii	27.73	2.00e-78	286.00
IUUC-Sja-107702	Schizosaccharomyces japonicus	25.69	1.00e-53	204.00
IUUC-Spo-108360	Schizosaccharomyces pombe	25.87	9.00e-54	204.00
IUUC-Ssl-108529	Sclerotinia sclerotiorum	24.80	2.00e-53	203.00
IUUC-Smo-109337	Selaginella moellendorffii	46.88	3.00e-179	621.00
IUUC-Sit-110790	Setaria italica	78.69	0.00e+00	1355.00
IUUC-Sly-111470	Solanum lycopersicum	54.81	0.00e+00	954.00
IUUC-Stu-111945	Solanum tuberosum	55.83	0.00e+00	986.00
IUUC-Sar-113075	Sorex araneus	27.14	3.00e-49	189.00
IUUC-Sbi-114822	Sorghum bicolor	83.75	0.00e+00	1097.00
IUUC-Sre-114913	Sporisorium reilianum	26.08	2.00e-50	193.00
IUUC-Ssc-116073	Sus scrofa	28.27	3.00e-71	262.00
IUUC-Tgu-117253	Taeniopygia guttata	30.27	1.00e-78	287.00
IUUC-Tru-117741	Takifugu rubripes	33.16	1.00e-50	194.00
IUUC-Tsy-118834	Tarsius syrichta	33.99	1.00e-40	161.00
IUUC-Tni-120726	Tetraodon nigroviridis	30.52	9.00e-85	307.00
IUUC-Tca-121655	Theobroma cacao	63.16	0.00e+00	983.00
IUUC-Tre-121921	Trichoderma reesei	23.57	2.00e-51	196.00
IUUC-Tvi-122540	Trichoderma virens	24.26	7.00e-54	204.00
IUUC-Tae-124363	Triticum aestivum	99.45	0.00e+00	1789.00
IUUC-Tme-127075	Tuber melanosporum	25.69	2.00e-30	126.00
IUUC-Tbe-128002	Tupaia belangeri	27.63	3.00e-20	93.60
IUUC-Ttr-129101	Tursiops truncatus	29.32	6.00e-72	265.00
IUUC-Uma-129374	Ustilago maydis	23.45	3.00e-38	153.00
IUUC-Vda-129719	Verticillium dahliae	25.93	1.00e-54	206.00
IUUC-Vpa-130039	Vicugna pacos	28.29	6.00e-69	255.00
IUUC-Vvi-131442	Vitis vinifera	55.18	0.00e+00	942.00
IUUC-Xtr-132599	Xenopus tropicalis	27.79	8.00e-76	278.00
IUUC-Xma-132991	Xiphophorus maculatus	31.60	3.00e-53	202.00
IUUC-Zma-135846	Zea mays	74.69	0.00e+00	1324.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence