iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Dre-028004

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

WD repeat domain 6

Genbank Nucleotide ID

CR847503

Gene Name

wdr6; si:dkey-20d21.7

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000078571.5	ENSDART00000140798.2	ENSDARP00000113761.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-23	82.9	216	247

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gH++ +++l++ ++ + l+s+sdD ++++W++
   Q: 216  GHSGVIFSLCYlQEsGWLASASDDRSVRLWSV 247
           8*********9966699*************97 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MASPVESAVV KSAVLVAPIT ALEFLGEDFL LTGEGPILSV YSLQASPKKC ASINVLQNYR 60
IHGIRPYKKH QSGGIPFSGA SSASDNSYKG DIIVFGGKGV RLVSFESEGQ CLKLIGPLLE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGTGTCAACG AGGAAGTGAA AACACATGCA TACAGTACGA AACATGCTTG ATGCAGTATA 60
AACGACCTTG TTTTTATTGT CTTTAAAATA AAGGCACGAT CTCTACAGGA GACAGGTTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

dre:100004270

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000976	Aegilops tauschii	20.00	3.00e-08	55.10
IUUC-Aml-001786	Ailuropoda melanoleuca	34.02	6.00e-156	545.00
IUUC-Atr-003053	Amborella trichopoda	22.15	3.00e-24	108.00
IUUC-Apl-003178	Anas platyrhynchos	37.73	1.00e-91	330.00
IUUC-Aca-004886	Anolis carolinensis	35.64	4.00e-166	579.00
IUUC-Aly-005509	Arabidopsis lyrata	21.68	2.00e-24	108.00
IUUC-Ath-007109	Arabidopsis thaliana	27.36	7.00e-21	97.10
IUUC-Ago-007817	Ashbya gossypii	24.00	2.00e-20	95.10
IUUC-Acl-008020	Aspergillus clavatus	22.46	4.00e-39	157.00
IUUC-Afl-008608	Aspergillus flavus	25.67	1.00e-17	85.50
IUUC-Afu-009035	Aspergillus fumigatus	23.03	1.00e-20	95.50
IUUC-Ani-009359	Aspergillus nidulans	23.12	1.00e-33	139.00
IUUC-Ang-009692	Aspergillus niger	22.34	3.00e-31	131.00
IUUC-Aor-010056	Aspergillus oryzae	25.67	3.00e-17	84.70
IUUC-Ate-010299	Aspergillus terreus	22.07	1.00e-28	122.00
IUUC-Ame-011051	Astyanax mexicanus	57.05	0.00e+00	1223.00
IUUC-Bgr-012077	Blumeria graminis	25.92	4.00e-14	74.30
IUUC-Bta-012793	Bos taurus	33.55	3.00e-157	549.00
IUUC-Bci-013679	Botrytis cinerea	23.37	2.00e-13	71.60
IUUC-Bdi-014401	Brachypodium distachyon	21.70	6.00e-27	117.00
IUUC-Bol-015628	Brassica oleracea	30.46	2.00e-14	75.10
IUUC-Bra-017446	Brassica rapa	25.93	2.00e-19	92.40
IUUC-Cja-018910	Callithrix jacchus	33.94	2.00e-162	566.00
IUUC-Cfa-021260	Canis familiaris	34.22	1.00e-157	550.00
IUUC-Cpo-022205	Cavia porcellus	33.69	5.00e-160	558.00
IUUC-Csa-023510	Chlorocebus sabaeus	33.55	1.00e-157	551.00
IUUC-Cgl-026380	Colletotrichum gloeosporioides	21.89	1.00e-14	75.50
IUUC-Dno-029804	Dasypus novemcinctus	34.09	4.00e-154	539.00
IUUC-Dor-030512	Dipodomys ordii	33.82	2.00e-113	404.00
IUUC-Dme-032047	Drosophila melanogaster	22.54	3.00e-16	81.30
IUUC-Ete-033076	Echinops telfairi	38.60	2.00e-74	274.00
IUUC-Eca-033727	Equus caballus	34.25	1.00e-130	460.00
IUUC-Eeu-035210	Erinaceus europaeus	33.20	7.00e-151	528.00
IUUC-Fca-035433	Felis catus	34.19	5.00e-158	552.00
IUUC-Fal-036807	Ficedula albicollis	37.83	3.00e-104	372.00
IUUC-Fox-037749	Fusarium oxysporum	20.32	3.00e-20	94.40
IUUC-Fso-038164	Fusarium solani	25.83	7.00e-18	86.70
IUUC-Gmo-039180	Gadus morhua	48.24	0.00e+00	900.00
IUUC-Gga-040482	Gallus gallus	36.05	6.00e-104	372.00
IUUC-Gac-042066	Gasterosteus aculeatus	50.72	0.00e+00	964.00
IUUC-Gma-042704	Glycine max	22.18	3.00e-28	121.00
IUUC-Ggo-044942	Gorilla gorilla	33.69	2.00e-157	550.00
IUUC-Hsa-046408	Homo sapiens	33.78	1.00e-160	560.00
IUUC-Hvu-047448	Hordeum vulgare	20.88	1.00e-15	79.30
IUUC-Itr-048756	Ictidomys tridecemlineatus	34.11	8.00e-162	564.00
IUUC-Kpa-049257	Komagataella pastoris	27.01	1.00e-22	102.00
IUUC-Lch-050170	Latimeria chalumnae	37.42	0.00e+00	709.00
IUUC-Lpe-051575	Leersia perrieri	21.18	1.00e-21	99.40
IUUC-Loc-052341	Lepisosteus oculatus	44.81	0.00e+00	729.00
IUUC-Lma-053318	Leptosphaeria maculans	21.53	7.00e-26	113.00
IUUC-Laf-054299	Loxodonta africana	33.39	2.00e-154	540.00
IUUC-Mcc-055438	Macaca mulatta	33.69	3.00e-158	552.00
IUUC-Meu-056206	Macropus eugenii	33.41	1.00e-99	358.00
IUUC-Mor-056928	Magnaporthe oryzae	22.38	6.00e-24	107.00
IUUC-Mtr-058455	Medicago truncatula	22.55	2.00e-24	108.00
IUUC-Mga-059962	Meleagris gallopavo	36.39	4.00e-98	352.00
IUUC-Mvi-060438	Microbotryum violaceum	29.89	2.00e-21	98.20
IUUC-Mmr-061353	Microcebus murinus	33.72	1.00e-156	548.00
IUUC-Mdo-062061	Monodelphis domestica	37.21	4.00e-156	545.00
IUUC-Mmu-064386	Mus musculus	33.36	2.00e-154	540.00
IUUC-Mac-065653	Musa acuminata	22.66	6.00e-37	150.00
IUUC-Mpu-066420	Mustela putorius furo	34.25	5.00e-161	562.00
IUUC-Mlu-068104	Myotis lucifugus	33.72	1.00e-155	544.00
IUUC-Nfi-068301	Neosartorya fischeri	21.73	2.00e-29	125.00
IUUC-Nle-069836	Nomascus leucogenys	32.93	6.00e-109	389.00
IUUC-Ont-071605	Oreochromis niloticus	50.66	0.00e+00	1054.00
IUUC-Oan-073645	Ornithorhynchus anatinus	37.32	0.00e+00	642.00
IUUC-Ocu-074708	Oryctolagus cuniculus	33.03	1.00e-148	521.00
IUUC-Oba-075290	Oryza barthii	20.88	2.00e-20	95.10
IUUC-Obr-076647	Oryza brachyantha	21.60	5.00e-23	103.00
IUUC-Ogl-077628	Oryza glaberrima	20.66	2.00e-24	108.00
IUUC-Ogu-078209	Oryza glumaepatula	20.45	4.00e-16	81.30
IUUC-Oin-079342	Oryza indica	26.69	9.00e-23	103.00
IUUC-Olo-080623	Oryza longistaminata	23.61	4.00e-20	92.80
IUUC-Ome-081776	Oryza meridionalis	27.11	7.00e-22	100.00
IUUC-Oni-082311	Oryza nivara	26.69	1.00e-22	103.00
IUUC-Opu-083195	Oryza punctata	24.54	3.00e-21	98.20
IUUC-Oru-085006	Oryza rufipogon	20.81	1.00e-20	96.30
IUUC-Osa-085317	Oryza sativa	20.58	9.00e-25	109.00
IUUC-Ola-087145	Oryzias latipes	48.69	0.00e+00	953.00
IUUC-Olu-087785	Ostreococcus lucimarinus	26.09	3.00e-13	71.20
IUUC-Oga-088206	Otolemur garnettii	34.19	3.00e-160	559.00
IUUC-Oar-089802	Ovis aries	33.22	3.00e-152	533.00
IUUC-Ptr-091528	Pan troglodytes	33.09	6.00e-142	498.00
IUUC-Pan-092782	Papio anubis	33.53	2.00e-157	550.00
IUUC-Psi-093102	Pelodiscus sinensis	37.19	2.00e-87	316.00
IUUC-Pno-095063	Phaeosphaeria nodorum	23.14	3.00e-16	81.30
IUUC-Ppa-095436	Physcomitrella patens	22.39	1.00e-22	102.00
IUUC-Pfo-097423	Poecilia formosa	48.96	0.00e+00	966.00
IUUC-Pab-097763	Pongo abelii	33.86	5.00e-158	552.00
IUUC-Pop-099090	Populus trichocarpa	27.01	1.00e-20	95.90
IUUC-Pca-100173	Procavia capensis	32.89	2.00e-154	540.00
IUUC-Ppe-101580	Prunus persica	21.98	2.00e-28	122.00
IUUC-Pva-102715	Pteropus vampyrus	33.20	2.00e-156	546.00
IUUC-Pgr-103424	Puccinia graminis	20.59	3.00e-18	87.80
IUUC-Pte-104316	Pyrenophora teres	21.07	3.00e-27	118.00
IUUC-Pyt-104676	Pyrenophora triticirepentis	21.38	1.00e-25	112.00
IUUC-Rno-105122	Rattus norvegicus	33.97	2.00e-161	563.00
IUUC-Sce-106465	Saccharomyces cerevisiae	21.80	9.00e-14	72.80
IUUC-Sha-107208	Sarcophilus harrisii	36.55	1.00e-174	607.00
IUUC-Sja-107771	Schizosaccharomyces japonicus	23.17	7.00e-24	106.00
IUUC-Spo-108272	Schizosaccharomyces pombe	23.24	9.00e-57	215.00
IUUC-Ssl-108576	Sclerotinia sclerotiorum	25.16	5.00e-12	67.40
IUUC-Smo-108961	Selaginella moellendorffii	22.29	2.00e-28	122.00
IUUC-Sit-109932	Setaria italica	22.24	9.00e-24	106.00
IUUC-Sly-111685	Solanum lycopersicum	23.35	2.00e-30	128.00
IUUC-Sar-112998	Sorex araneus	34.21	2.00e-164	573.00
IUUC-Sbi-114074	Sorghum bicolor	23.24	8.00e-28	119.00
IUUC-Ssc-115619	Sus scrofa	34.49	5.00e-82	299.00
IUUC-Tgu-117485	Taeniopygia guttata	39.22	2.00e-101	363.00
IUUC-Tru-118104	Takifugu rubripes	49.46	0.00e+00	1021.00
IUUC-Tni-119995	Tetraodon nigroviridis	48.72	0.00e+00	939.00
IUUC-Tca-121790	Theobroma cacao	23.70	5.00e-29	124.00
IUUC-Tre-122080	Trichoderma reesei	20.51	1.00e-20	95.90
IUUC-Tae-123488	Triticum aestivum	22.97	8.00e-33	136.00
IUUC-Tur-126787	Triticum urartu	22.43	2.00e-22	102.00
IUUC-Tme-126957	Tuber melanosporum	21.23	5.00e-18	86.70
IUUC-Tbe-128082	Tupaia belangeri	34.38	2.00e-33	138.00
IUUC-Ttr-128387	Tursiops truncatus	34.90	1.00e-68	255.00
IUUC-Vpa-130257	Vicugna pacos	34.10	3.00e-46	180.00
IUUC-Vvi-131701	Vitis vinifera	23.34	7.00e-25	110.00
IUUC-Xtr-132622	Xenopus tropicalis	35.70	0.00e+00	656.00
IUUC-Xma-134014	Xiphophorus maculatus	50.00	0.00e+00	999.00
IUUC-Yli-134589	Yarrowia lipolytica	26.61	2.00e-16	81.60
IUUC-Zma-135732	Zea mays	22.34	3.00e-27	118.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence