iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000016629.1	ENSSHAT00000019741.1	ENSSHAP00000019584.1
ENSSHAG00000016629.1	ENSSHAT00000019742.1	ENSSHAP00000019585.1
ENSSHAG00000016629.1	ENSSHAT00000019743.1	ENSSHAP00000019586.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/ZnF/UBZ	4.20e-07	30.3	48	71

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/ZnF/UBZ

   S: 1    llvCPvCqkmvdqtdfeeHlDe.C 23
           +l CP+C++mv+++d+++H De C
   Q: 48   KLACPICGQMVPRYDLNRHIDEmC 71
           689******************966 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

MSDKSPEEKR PRKSLSKSKN QKNETKAKKG LFKSNSIFSF FNNAPPVKLA CPICGQMVPR 60
YDLNRHIDEM CQQNNNEVLQ IDRTEFDSSV NPNLSPANLS KTTTGCIPPK QSLPPQINLS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAGAAGAAA TTATTCAAGC AAAGAACATG AAACAAAACA GTTCCAATTT TTGTCACTTC 60
AGAATTAGAA CATCAACATT GCTCGGTTTT ATATGAAACA GCCTGCGTTG AATAATTACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR033315--Fan1-like
IPR011990--TPR-like_helical_dom
IPR014883--VRR_NUC
IPR006642--Znf_Rad18_put

Pfam

PF08774--VRR_NUC

SMART

SM00990--VRR_NUC
SM00734--ZnF_Rad18

Gene Ontology

GO:0005829--C:cytosol
GO:0045171--C:intercellular bridge
GO:0005654--C:nucleoplasm
GO:0008409--F:5'-3' exonuclease activity
GO:0017108--F:5'-flap endonuclease activity
GO:0070336--F:flap-structured DNA binding
GO:0000724--P:double-strand break repair via homologous recombination
GO:0036297--P:interstrand cross-link repair
GO:0033683--P:nucleotide-excision repair, DNA incision

KEGG

shr:100924951

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000306	Aegilops tauschii	33.48	3.00e-60	225.00
IUUC-Aml-001380	Ailuropoda melanoleuca	60.51	0.00e+00	1211.00
IUUC-Atr-002873	Amborella trichopoda	29.56	1.00e-76	281.00
IUUC-Apl-003430	Anas platyrhynchos	52.82	0.00e+00	976.00
IUUC-Aca-005376	Anolis carolinensis	50.24	0.00e+00	898.00
IUUC-Aly-005463	Arabidopsis lyrata	29.68	3.00e-66	246.00
IUUC-Ath-007392	Arabidopsis thaliana	30.46	9.00e-70	258.00
IUUC-Acl-008285	Aspergillus clavatus	25.90	3.00e-57	216.00
IUUC-Afl-008680	Aspergillus flavus	26.73	5.00e-62	232.00
IUUC-Afu-008795	Aspergillus fumigatus	26.12	8.00e-56	211.00
IUUC-Ani-009329	Aspergillus nidulans	25.41	4.00e-47	182.00
IUUC-Ang-009526	Aspergillus niger	26.94	2.00e-46	180.00
IUUC-Aor-009880	Aspergillus oryzae	26.35	5.00e-61	229.00
IUUC-Ate-010269	Aspergillus terreus	26.61	9.00e-62	231.00
IUUC-Ame-011630	Astyanax mexicanus	56.45	1.00e-170	593.00
IUUC-Bgr-012168	Blumeria graminis	26.03	3.00e-33	137.00
IUUC-Bta-013504	Bos taurus	56.70	0.00e+00	1079.00
IUUC-Bci-013838	Botrytis cinerea	26.13	3.00e-50	193.00
IUUC-Bdi-014522	Brachypodium distachyon	30.59	8.00e-68	251.00
IUUC-Bol-016153	Brassica oleracea	30.34	3.00e-71	263.00
IUUC-Bra-017548	Brassica rapa	28.35	8.00e-59	222.00
IUUC-Cel-018711	Caenorhabditis elegans	31.27	2.00e-66	247.00
IUUC-Cja-018810	Callithrix jacchus	57.68	0.00e+00	1077.00
IUUC-Cfa-020147	Canis familiaris	59.57	0.00e+00	1198.00
IUUC-Cpo-021787	Cavia porcellus	56.36	0.00e+00	1085.00
IUUC-Csa-023730	Chlorocebus sabaeus	58.29	0.00e+00	1160.00
IUUC-Cho-024754	Choloepus hoffmanni	65.15	7.00e-117	414.00
IUUC-Cin-025459	Ciona intestinalis	52.66	1.00e-45	174.00
IUUC-Cgl-026724	Colletotrichum gloeosporioides	25.71	8.00e-41	162.00
IUUC-Cne-026815	Cryptococcus neoformans	25.80	1.00e-38	155.00
IUUC-Cme-027208	Cyanidioschyzon merolae	32.19	1.00e-25	111.00
IUUC-Dre-027725	Danio rerio	60.06	0.00e+00	767.00
IUUC-Dno-029713	Dasypus novemcinctus	59.64	0.00e+00	1206.00
IUUC-Dse-031534	Dothistroma septosporum	26.44	5.00e-46	179.00
IUUC-Ete-033004	Echinops telfairi	49.10	0.00e+00	669.00
IUUC-Eca-034119	Equus caballus	61.27	0.00e+00	1187.00
IUUC-Eeu-034618	Erinaceus europaeus	51.31	0.00e+00	926.00
IUUC-Fca-035411	Felis catus	59.59	0.00e+00	1202.00
IUUC-Fal-037505	Ficedula albicollis	62.03	0.00e+00	875.00
IUUC-Fox-038070	Fusarium oxysporum	26.14	7.00e-52	198.00
IUUC-Fso-038376	Fusarium solani	27.00	3.00e-55	210.00
IUUC-Gmo-039093	Gadus morhua	61.76	0.00e+00	783.00
IUUC-Ggr-040081	Gaeumannomyces graminis	25.63	4.00e-51	196.00
IUUC-Gac-041973	Gasterosteus aculeatus	62.25	0.00e+00	824.00
IUUC-Gma-043421	Glycine max	30.96	2.00e-77	284.00
IUUC-Ggo-044431	Gorilla gorilla	58.86	0.00e+00	1168.00
IUUC-Hsa-046520	Homo sapiens	59.04	0.00e+00	1173.00
IUUC-Hvu-047632	Hordeum vulgare	32.07	1.00e-78	287.00
IUUC-Itr-048263	Ictidomys tridecemlineatus	59.16	0.00e+00	1169.00
IUUC-Lch-049799	Latimeria chalumnae	70.15	0.00e+00	973.00
IUUC-Lpe-051149	Leersia perrieri	32.11	4.00e-83	303.00
IUUC-Loc-051964	Lepisosteus oculatus	48.01	0.00e+00	875.00
IUUC-Lma-053161	Leptosphaeria maculans	25.71	3.00e-54	206.00
IUUC-Laf-054446	Loxodonta africana	60.02	0.00e+00	1193.00
IUUC-Mcc-055087	Macaca mulatta	58.11	0.00e+00	1159.00
IUUC-Meu-055930	Macropus eugenii	76.33	0.00e+00	844.00
IUUC-Mor-056966	Magnaporthe oryzae	28.57	1.00e-52	201.00
IUUC-Mpo-057393	Magnaporthe poae	27.36	6.00e-44	172.00
IUUC-Mtr-058315	Medicago truncatula	31.68	4.00e-82	299.00
IUUC-Mla-058859	Melampsora laricipopulina	26.42	5.00e-40	159.00
IUUC-Mga-059870	Meleagris gallopavo	71.30	0.00e+00	941.00
IUUC-Mvi-060226	Microbotryum violaceum	26.86	1.00e-50	194.00
IUUC-Mmr-060892	Microcebus murinus	60.55	0.00e+00	1172.00
IUUC-Mdo-062896	Monodelphis domestica	79.76	0.00e+00	1706.00
IUUC-Mmu-064276	Mus musculus	56.34	0.00e+00	1163.00
IUUC-Mac-064503	Musa acuminata	31.21	6.00e-71	262.00
IUUC-Mpu-066820	Mustela putorius furo	59.16	0.00e+00	1193.00
IUUC-Mlu-068131	Myotis lucifugus	53.82	0.00e+00	1029.00
IUUC-Nfi-068480	Neosartorya fischeri	27.44	1.00e-52	201.00
IUUC-Ncr-068646	Neurospora crassa	26.13	3.00e-59	223.00
IUUC-Nle-069545	Nomascus leucogenys	57.32	0.00e+00	1122.00
IUUC-Opr-070722	Ochotona princeps	71.54	0.00e+00	776.00
IUUC-Ont-072561	Oreochromis niloticus	49.14	0.00e+00	893.00
IUUC-Oan-072811	Ornithorhynchus anatinus	60.99	0.00e+00	1206.00
IUUC-Ocu-073884	Oryctolagus cuniculus	56.34	0.00e+00	1131.00
IUUC-Oba-075112	Oryza barthii	31.60	1.00e-63	238.00
IUUC-Obr-076057	Oryza brachyantha	32.31	3.00e-84	306.00
IUUC-Ogl-077002	Oryza glaberrima	31.71	6.00e-75	275.00
IUUC-Ogu-078683	Oryza glumaepatula	31.11	2.00e-61	230.00
IUUC-Oin-079952	Oryza indica	31.35	8.00e-64	238.00
IUUC-Olo-080278	Oryza longistaminata	31.31	4.00e-63	236.00
IUUC-Ome-081094	Oryza meridionalis	31.03	4.00e-63	236.00
IUUC-Oni-083059	Oryza nivara	32.34	2.00e-64	240.00
IUUC-Opu-084144	Oryza punctata	31.57	4.00e-79	289.00
IUUC-Oru-084897	Oryza rufipogon	31.93	1.00e-63	238.00
IUUC-Osa-085924	Oryza sativa	32.16	3.00e-75	276.00
IUUC-Oga-088979	Otolemur garnettii	60.19	0.00e+00	1155.00
IUUC-Oar-090362	Ovis aries	56.85	0.00e+00	1134.00
IUUC-Ptr-090823	Pan troglodytes	58.86	0.00e+00	1175.00
IUUC-Pan-092863	Papio anubis	58.39	0.00e+00	1165.00
IUUC-Psi-093006	Pelodiscus sinensis	58.10	0.00e+00	1061.00
IUUC-Pma-094523	Petromyzon marinus	49.48	1.00e-136	479.00
IUUC-Pno-094770	Phaeosphaeria nodorum	26.32	1.00e-47	184.00
IUUC-Ppa-095372	Physcomitrella patens	31.18	4.00e-76	280.00
IUUC-Pfo-096875	Poecilia formosa	61.74	0.00e+00	820.00
IUUC-Pab-097665	Pongo abelii	59.43	0.00e+00	1145.00
IUUC-Pop-099082	Populus trichocarpa	31.56	2.00e-79	291.00
IUUC-Pca-100138	Procavia capensis	59.75	2.00e-111	397.00
IUUC-Ppe-101167	Prunus persica	27.44	3.00e-29	123.00
IUUC-Pva-103199	Pteropus vampyrus	51.25	1.00e-102	367.00
IUUC-Pgr-103480	Puccinia graminis	27.11	1.00e-41	165.00
IUUC-Ptt-103783	Puccinia triticina	30.29	4.00e-45	177.00
IUUC-Pte-104357	Pyrenophora teres	27.41	2.00e-44	174.00
IUUC-Pyt-104788	Pyrenophora triticirepentis	27.57	4.00e-50	193.00
IUUC-Rno-104958	Rattus norvegicus	72.42	0.00e+00	1032.00
IUUC-Sja-107731	Schizosaccharomyces japonicus	28.78	1.00e-49	191.00
IUUC-Spo-108086	Schizosaccharomyces pombe	25.36	7.00e-42	165.00
IUUC-Ssl-108610	Sclerotinia sclerotiorum	26.44	2.00e-49	191.00
IUUC-Smo-108690	Selaginella moellendorffii	33.85	6.00e-83	301.00
IUUC-Sit-110385	Setaria italica	36.34	1.00e-53	204.00
IUUC-Sly-111187	Solanum lycopersicum	31.80	4.00e-79	289.00
IUUC-Stu-112673	Solanum tuberosum	46.34	1.00e-35	142.00
IUUC-Sar-113548	Sorex araneus	68.18	1.00e-136	479.00
IUUC-Sbi-114131	Sorghum bicolor	35.81	1.00e-62	234.00
IUUC-Sre-114921	Sporisorium reilianum	38.46	8.00e-35	142.00
IUUC-Ssc-115484	Sus scrofa	58.47	0.00e+00	1153.00
IUUC-Tgu-116749	Taeniopygia guttata	68.40	0.00e+00	874.00
IUUC-Tru-118772	Takifugu rubripes	58.74	0.00e+00	745.00
IUUC-Tsy-119359	Tarsius syrichta	60.51	0.00e+00	951.00
IUUC-Tni-120878	Tetraodon nigroviridis	47.00	0.00e+00	808.00
IUUC-Tca-120912	Theobroma cacao	31.38	1.00e-79	291.00
IUUC-Tre-122171	Trichoderma reesei	25.94	1.00e-59	224.00
IUUC-Tvi-122483	Trichoderma virens	27.39	1.00e-58	221.00
IUUC-Tae-125125	Triticum aestivum	31.62	3.00e-77	283.00
IUUC-Tur-126497	Triticum urartu	31.76	6.00e-77	282.00
IUUC-Tbe-127473	Tupaia belangeri	54.92	3.00e-79	289.00
IUUC-Ttr-128458	Tursiops truncatus	54.90	0.00e+00	1024.00
IUUC-Uma-129558	Ustilago maydis	40.10	3.00e-35	144.00
IUUC-Vda-129683	Verticillium dahliae	24.61	4.00e-49	189.00
IUUC-Vpa-130201	Vicugna pacos	45.88	7.00e-97	348.00
IUUC-Vvi-131226	Vitis vinifera	33.07	4.00e-65	242.00
IUUC-Xtr-132517	Xenopus tropicalis	56.24	0.00e+00	746.00
IUUC-Xma-133763	Xiphophorus maculatus	60.98	0.00e+00	809.00
IUUC-Zma-135455	Zea mays	32.01	2.00e-81	296.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence