iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Kpa-049232

Ensembl Protein ID

CAY70267

UniProt Accession

C4R3Z1; C4R3Z1_KOMPG

Genbank Protein ID

CAY70267.1

Protein Name

Essential protein required for biogenesis of 40S (Small) ribosomal subunit

Genbank Nucleotide ID

FN392321

Gene Name

PAS_chr3_0240

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PAS_chr3_0240	CAY70267	CAY70267

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.80e-34	113.8	293	327
UBD/Beta-Prp	5.00e-41	138.9	157	370

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           H + v +++f ++   lv+Gs+D+ti+++++++g+
   Q: 293  HVSAVMDVDFsPTgQELVTGSYDKTIRIYETTKGH 327
           9999*******77799**************99986 PP

UBD/Beta-Prp

   S: 40   ttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp.sgdklvsGshdrtirvwdletgqcleetlsghdgv 139
           +++ l++++ g     ++++ +++ +++vtg+  r i++wd++  ++v+ l+   d+++s++f+  ++++++s+++d+ i ++d++t++  ++    ++  
   Q: 157  SSQGLVKTYLGE-HSFKTIDHHRENDVFVTGG--RRINLWDVNRKSPVSDLSWGADNIVSVKFNMsETSVIASTGSDNSIVLYDIRTNSPTQK--VRTSMR 252
           555555555333.3588999999999999997..79*****************************666***********************94..444556 PP
   S: 140  vncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnght.dnvksvrfspnderlv 238
            n ++++p + + +vs+s D  + lWd+++ +      ++h ++v  ++f+++g+elv+gs+d+t+++++  +g+  ++++  + + v + +fs ++++++
   Q: 253  SNALCWNPIEpFSFVSASEDHNCYLWDMRNLSRSSNIYKDHVSAVMDVDFSPTGQELVTGSYDKTIRIYETTKGHSRDIYHTKRmQHVFVTKFSMDSKYIL 353
           89999999999*****************888888888778****************************************99764788899999******* PP
   S: 239  sgssDgsiriWdlrsgd 255
           sgs+Dg +r+W +r ++
   Q: 354  SGSDDGNVRLWRSRASE 370
           ***********666555 PP

Organism

Komagataella pastoris

Protein Sequence
(Fasta)

MKIKTISRSS DAYVPVRNTE ESAIPRNLNP ALHPFERARE YTKALTATKL ERMFAQPFIG 60
QLGKSHRDGV YTLAKNFKIV NRVASGSGDG VIKYWDLTSR DEIVSFKAHY GMVSGLCVTP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGATCA AGACAATAAG TAGGTCATCA GACGCCTATG TTCCAGTGAG GAACACTGAG 60
GAGTCTGCCA TTCCCAGAAA CTTAAACCCT GCACTGCATC CATTTGAAAG AGCAAGAGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR027295--Quinoprotein_ADH-like_fam
IPR007287--Sof1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04158--Sof1
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0072686--C:mitotic spindle
GO:0005730--C:nucleolus

KEGG

ppa:PAS_chr3_0240

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002178	Ailuropoda melanoleuca	46.39	6.00e-120	421.00
IUUC-Atr-002799	Amborella trichopoda	44.20	3.00e-121	426.00
IUUC-Apl-003675	Anas platyrhynchos	47.38	4.00e-121	426.00
IUUC-Aca-004792	Anolis carolinensis	46.61	3.00e-124	436.00
IUUC-Aly-005998	Arabidopsis lyrata	44.20	1.00e-122	430.00
IUUC-Ath-007526	Arabidopsis thaliana	43.48	3.00e-120	422.00
IUUC-Ago-007774	Ashbya gossypii	64.32	0.00e+00	650.00
IUUC-Acl-008024	Aspergillus clavatus	51.73	2.00e-139	486.00
IUUC-Afu-008930	Aspergillus fumigatus	49.69	4.00e-136	475.00
IUUC-Ani-009370	Aspergillus nidulans	52.16	3.00e-142	496.00
IUUC-Ang-009827	Aspergillus niger	52.61	6.00e-141	491.00
IUUC-Aor-010060	Aspergillus oryzae	50.22	3.00e-133	466.00
IUUC-Ate-010434	Aspergillus terreus	50.67	2.00e-115	406.00
IUUC-Ame-011967	Astyanax mexicanus	48.17	2.00e-123	433.00
IUUC-Bgr-011989	Blumeria graminis	49.89	9.00e-134	467.00
IUUC-Bta-013291	Bos taurus	36.08	1.00e-77	281.00
IUUC-Bci-013868	Botrytis cinerea	51.64	6.00e-141	491.00
IUUC-Bdi-014343	Brachypodium distachyon	43.33	4.00e-111	392.00
IUUC-Bol-015740	Brassica oleracea	41.36	2.00e-110	390.00
IUUC-Bra-016689	Brassica rapa	41.36	1.00e-110	390.00
IUUC-Cel-018536	Caenorhabditis elegans	37.65	2.00e-79	287.00
IUUC-Cja-018779	Callithrix jacchus	46.83	4.00e-123	432.00
IUUC-Cfa-020105	Canis familiaris	47.26	2.00e-124	437.00
IUUC-Cpo-021538	Cavia porcellus	45.95	3.00e-119	419.00
IUUC-Cre-022798	Chlamydomonas reinhardtii	50.00	1.00e-46	176.00
IUUC-Csa-023492	Chlorocebus sabaeus	46.83	2.00e-123	433.00
IUUC-Cho-024497	Choloepus hoffmanni	41.64	2.00e-73	266.00
IUUC-Cin-025524	Ciona intestinalis	46.37	1.00e-118	417.00
IUUC-Csv-026197	Ciona savignyi	44.84	8.00e-114	401.00
IUUC-Cgl-026745	Colletotrichum gloeosporioides	50.87	3.00e-131	459.00
IUUC-Cne-026840	Cryptococcus neoformans	38.93	2.00e-85	308.00
IUUC-Cme-027111	Cyanidioschyzon merolae	34.08	4.00e-71	259.00
IUUC-Dre-027471	Danio rerio	48.20	5.00e-123	432.00
IUUC-Dno-029790	Dasypus novemcinctus	46.56	7.00e-99	351.00
IUUC-Dor-030971	Dipodomys ordii	37.64	2.00e-87	313.00
IUUC-Dse-031563	Dothistroma septosporum	53.26	3.00e-141	493.00
IUUC-Dme-032161	Drosophila melanogaster	43.08	3.00e-108	383.00
IUUC-Ete-033127	Echinops telfairi	44.88	7.00e-114	402.00
IUUC-Eca-033531	Equus caballus	47.48	5.00e-119	418.00
IUUC-Eeu-034663	Erinaceus europaeus	42.27	4.00e-102	363.00
IUUC-Fca-036258	Felis catus	47.05	2.00e-123	433.00
IUUC-Fal-037456	Ficedula albicollis	47.48	2.00e-122	429.00
IUUC-Fox-038025	Fusarium oxysporum	49.45	2.00e-129	453.00
IUUC-Fso-038344	Fusarium solani	48.47	1.00e-117	414.00
IUUC-Gmo-039643	Gadus morhua	45.51	1.00e-118	417.00
IUUC-Ggr-039816	Gaeumannomyces graminis	48.05	2.00e-122	430.00
IUUC-Gga-040143	Gallus gallus	47.48	1.00e-123	434.00
IUUC-Gac-041665	Gasterosteus aculeatus	46.50	1.00e-121	427.00
IUUC-Gma-043073	Glycine max	42.67	4.00e-114	402.00
IUUC-Ggo-045058	Gorilla gorilla	47.05	3.00e-124	436.00
IUUC-Hsa-046843	Homo sapiens	46.83	3.00e-123	433.00
IUUC-Hvu-047654	Hordeum vulgare	44.37	6.00e-71	258.00
IUUC-Itr-048822	Ictidomys tridecemlineatus	46.39	5.00e-123	432.00
IUUC-Lch-050542	Latimeria chalumnae	47.70	4.00e-122	429.00
IUUC-Lpe-051622	Leersia perrieri	43.33	2.00e-114	403.00
IUUC-Loc-052674	Lepisosteus oculatus	45.69	2.00e-119	420.00
IUUC-Lma-053108	Leptosphaeria maculans	49.34	6.00e-134	468.00
IUUC-Laf-053385	Loxodonta africana	47.05	1.00e-121	427.00
IUUC-Mcc-055151	Macaca mulatta	46.39	1.00e-122	430.00
IUUC-Meu-056230	Macropus eugenii	43.50	1.00e-52	198.00
IUUC-Mor-057013	Magnaporthe oryzae	48.86	1.00e-123	434.00
IUUC-Mpo-057530	Magnaporthe poae	48.28	3.00e-123	432.00
IUUC-Mtr-058187	Medicago truncatula	43.54	2.00e-113	400.00
IUUC-Mla-058964	Melampsora laricipopulina	41.32	9.00e-107	378.00
IUUC-Mga-059712	Meleagris gallopavo	48.51	1.00e-120	424.00
IUUC-Mvi-060370	Microbotryum violaceum	41.59	2.00e-75	274.00
IUUC-Mmr-061340	Microcebus murinus	45.85	2.00e-115	407.00
IUUC-Mdo-062978	Monodelphis domestica	47.92	3.00e-128	449.00
IUUC-Mmu-063439	Mus musculus	47.48	3.00e-124	436.00
IUUC-Mac-065129	Musa acuminata	42.73	7.00e-119	418.00
IUUC-Mpu-066548	Mustela putorius furo	42.82	1.00e-90	324.00
IUUC-Mlu-067660	Myotis lucifugus	46.61	1.00e-123	434.00
IUUC-Nfi-068455	Neosartorya fischeri	51.74	3.00e-140	489.00
IUUC-Ncr-068848	Neurospora crassa	48.91	3.00e-127	446.00
IUUC-Nle-069923	Nomascus leucogenys	46.61	5.00e-123	432.00
IUUC-Opr-070279	Ochotona princeps	37.31	3.00e-36	143.00
IUUC-Ont-072234	Oreochromis niloticus	47.14	3.00e-125	439.00
IUUC-Oan-073713	Ornithorhynchus anatinus	43.41	2.00e-46	176.00
IUUC-Ocu-073782	Oryctolagus cuniculus	46.39	7.00e-123	431.00
IUUC-Oba-075161	Oryza barthii	43.33	7.00e-115	404.00
IUUC-Obr-076868	Oryza brachyantha	43.33	1.00e-114	404.00
IUUC-Ogl-077062	Oryza glaberrima	43.33	7.00e-115	404.00
IUUC-Ogu-078308	Oryza glumaepatula	43.33	7.00e-115	405.00
IUUC-Oin-079378	Oryza indica	43.33	7.00e-115	405.00
IUUC-Olo-080638	Oryza longistaminata	41.36	1.00e-104	370.00
IUUC-Oni-082368	Oryza nivara	43.33	7.00e-115	405.00
IUUC-Opu-083628	Oryza punctata	43.33	7.00e-115	405.00
IUUC-Oru-085226	Oryza rufipogon	43.54	2.00e-114	403.00
IUUC-Osa-085368	Oryza sativa	38.71	1.00e-57	213.00
IUUC-Ola-086836	Oryzias latipes	48.14	8.00e-127	444.00
IUUC-Olu-087755	Ostreococcus lucimarinus	41.50	2.00e-107	380.00
IUUC-Oga-088170	Otolemur garnettii	46.39	7.00e-123	431.00
IUUC-Oar-089388	Ovis aries	47.26	8.00e-124	434.00
IUUC-Ptr-090494	Pan troglodytes	46.83	3.00e-123	433.00
IUUC-Pan-091697	Papio anubis	46.83	2.00e-123	433.00
IUUC-Psi-093916	Pelodiscus sinensis	46.39	5.00e-120	422.00
IUUC-Pno-095004	Phaeosphaeria nodorum	45.97	3.00e-122	429.00
IUUC-Ppa-095514	Physcomitrella patens	45.30	3.00e-122	429.00
IUUC-Pfo-097432	Poecilia formosa	46.49	4.00e-120	422.00
IUUC-Pab-098423	Pongo abelii	47.05	9.00e-124	434.00
IUUC-Pop-099649	Populus trichocarpa	43.67	2.00e-121	426.00
IUUC-Pca-100365	Procavia capensis	45.73	5.00e-112	396.00
IUUC-Ppe-101350	Prunus persica	41.41	2.00e-117	413.00
IUUC-Pva-102845	Pteropus vampyrus	46.61	2.00e-120	424.00
IUUC-Pgr-103469	Puccinia graminis	42.23	4.00e-78	283.00
IUUC-Ptt-103980	Puccinia triticina	41.52	2.00e-76	277.00
IUUC-Pte-104111	Pyrenophora teres	50.87	6.00e-129	451.00
IUUC-Pyt-104610	Pyrenophora triticirepentis	50.66	1.00e-128	451.00
IUUC-Rno-105082	Rattus norvegicus	47.05	8.00e-124	434.00
IUUC-Sce-106340	Saccharomyces cerevisiae	65.74	0.00e+00	651.00
IUUC-Sha-106584	Sarcophilus harrisii	46.83	1.00e-125	441.00
IUUC-Sja-107703	Schizosaccharomyces japonicus	53.74	2.00e-134	469.00
IUUC-Spo-108046	Schizosaccharomyces pombe	53.96	2.00e-142	496.00
IUUC-Ssl-108574	Sclerotinia sclerotiorum	51.86	3.00e-140	489.00
IUUC-Smo-109548	Selaginella moellendorffii	44.20	8.00e-122	428.00
IUUC-Sit-110242	Setaria italica	43.11	1.00e-111	394.00
IUUC-Sly-111762	Solanum lycopersicum	42.23	5.00e-109	385.00
IUUC-Stu-112156	Solanum tuberosum	42.01	4.00e-109	385.00
IUUC-Sbi-114739	Sorghum bicolor	43.11	2.00e-113	400.00
IUUC-Sre-114951	Sporisorium reilianum	42.40	6.00e-119	418.00
IUUC-Ssc-115510	Sus scrofa	46.39	1.00e-121	427.00
IUUC-Tgu-117234	Taeniopygia guttata	48.39	6.00e-119	418.00
IUUC-Tru-117986	Takifugu rubripes	47.10	6.00e-123	431.00
IUUC-Tsy-119252	Tarsius syrichta	44.77	5.00e-112	395.00
IUUC-Tni-119785	Tetraodon nigroviridis	46.10	7.00e-116	408.00
IUUC-Tca-121222	Theobroma cacao	43.54	4.00e-119	419.00
IUUC-Tre-122243	Trichoderma reesei	49.45	1.00e-130	457.00
IUUC-Tvi-122293	Trichoderma virens	49.89	8.00e-131	457.00
IUUC-Tae-125191	Triticum aestivum	42.89	2.00e-108	383.00
IUUC-Tur-126098	Triticum urartu	41.49	3.00e-99	353.00
IUUC-Tme-127200	Tuber melanosporum	56.02	2.00e-159	553.00
IUUC-Tbe-127568	Tupaia belangeri	41.60	4.00e-55	206.00
IUUC-Ttr-129185	Tursiops truncatus	40.70	7.00e-101	358.00
IUUC-Uma-129353	Ustilago maydis	42.80	9.00e-120	421.00
IUUC-Vda-129768	Verticillium dahliae	51.52	5.00e-132	462.00
IUUC-Vpa-130572	Vicugna pacos	46.83	5.00e-122	429.00
IUUC-Vvi-131555	Vitis vinifera	42.01	8.00e-115	404.00
IUUC-Xtr-132263	Xenopus tropicalis	46.56	4.00e-103	365.00
IUUC-Xma-133925	Xiphophorus maculatus	46.94	5.00e-120	422.00
IUUC-Yli-134384	Yarrowia lipolytica	57.88	4.00e-156	542.00
IUUC-Zma-135616	Zea mays	42.89	1.00e-111	394.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence